MGE detailed information
MGE type: Conjugative plasmid MGE length: 109494 bp
Accession: NZ_CP058572 Location: 1..109494 Organism: Escherichia coli strain EC2 Replicon: plasmid pEC2-1
Accession: NZ_CP058572 Location: 1..109494 Organism: Escherichia coli strain EC2 Replicon: plasmid pEC2-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HX136_RS25040 () | 705..1232 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HX136_RS25045 () | 1283..1687 | + | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| HX136_RS25050 () | 1751..1939 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HX136_RS25055 () | 1923..2723 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HX136_RS25060 () | 2813..5857 | + | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| HX136_RS25065 () | 5857..6471 | + | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| HX136_RS25070 () | 6438..7640 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| HX136_RS25075 () | 7669..8253 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| HX136_RS25080 () | 8350..10518 | + | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| HX136_RS25085 () | 10592..11242 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HX136_RS25090 () | 11314..11523 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| HX136_RS25095 () | 11915..12091 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| HX136_RS25100 () | 12750..13001 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| HX136_RS25105 () | 13073..13225 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - () | 13280..13337 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13280..13337 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13280..13337 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 13280..13337 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| HX136_RS25110 () | 13517..14725 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| HX136_RS25115 () | 14744..15814 | + | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| HX136_RS25120 () | 15807..18098 | + | 2292 | WP_001289276.1 | hypothetical protein | - |
| HX136_RS25125 () | 18135..20834 | - | 2700 | WP_024143648.1 | Protein TraI | Relaxase |
| HX136_RS25130 () | 20845..21177 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HX136_RS25135 () | 21411..21746 | + | 336 | WP_000157098.1 | hypothetical protein | - |
| HX136_RS25140 () | 21831..22679 | - | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| HX136_RS25145 () | 23028..23225 | + | 198 | WP_001412266.1 | hypothetical protein | - |
| HX136_RS25150 () | 23259..23510 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HX136_RS25155 () | 23541..23711 | - | 171 | WP_000150325.1 | hypothetical protein | - |
| HX136_RS25160 () | 23773..24714 | - | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| HX136_RS25165 () | 24779..25045 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| HX136_RS25170 () | 25137..25571 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| HX136_RS25175 () | 26300..26800 | - | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| HX136_RS25180 () | 27263..27859 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| HX136_RS25185 () | 27856..28575 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| HX136_RS25190 () | 28572..29006 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| HX136_RS25195 () | 29061..31019 | - | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| HX136_RS25200 () | 31078..31311 | - | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| HX136_RS25205 () | 31369..31896 | - | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| HX136_RS25210 () | 32265..32333 | + | 69 | Protein_35 | pilus protein | - |
| HX136_RS25215 () | 32666..32857 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| HX136_RS25220 () | 32854..33276 | - | 423 | WP_000271729.1 | DUF1380 family protein | - |
| HX136_RS25225 () | 33323..33625 | - | 303 | WP_072132163.1 | antirestriction protein | - |
| HX136_RS25230 () | 34166..34936 | - | 771 | WP_001044393.1 | hypothetical protein | - |
| HX136_RS25235 () | 34987..35421 | - | 435 | WP_000274403.1 | DUF1380 family protein | - |
| HX136_RS25240 () | 35433..35654 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| HX136_RS25245 () | 35655..36338 | - | 684 | WP_000086178.1 | DNA methylase | - |
| HX136_RS25250 () | 36415..36726 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| HX136_RS25255 () | 36723..37625 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| HX136_RS25260 () | 38043..38291 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| HX136_RS25265 () | 38288..38725 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HX136_RS25270 () | 38725..39999 | + | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| HX136_RS25275 () | 40001..40417 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HX136_RS25280 () | 40410..41390 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HX136_RS25285 () | 41804..42112 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| HX136_RS25290 () | 42199..42843 | - | 645 | WP_001144036.1 | ParA family protein | - |
| HX136_RS25295 () | 43023..43802 | - | 780 | WP_021537353.1 | site-specific integrase | - |
| HX136_RS25300 () | 43804..44217 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| HX136_RS25305 () | 44749..45675 | + | 927 | WP_001290416.1 | hypothetical protein | - |
| HX136_RS25310 () | 45720..45974 | + | 255 | WP_000678527.1 | hypothetical protein | - |
| HX136_RS25315 () | 46473..46817 | + | 345 | WP_000793307.1 | hypothetical protein | - |
| HX136_RS25320 () | 46993..47994 | - | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| HX136_RS25325 () | 48345..48602 | + | 258 | WP_000371888.1 | hypothetical protein | - |
| HX136_RS25330 () | 48602..49192 | + | 591 | WP_000194553.1 | hypothetical protein | - |
| HX136_RS25335 () | 49212..49560 | - | 349 | Protein_60 | hypothetical protein | - |
| HX136_RS25340 () | 49679..50026 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| HX136_RS25345 () | 50044..51924 | - | 1881 | WP_001283341.1 | colicin 1B | - |
| HX136_RS25350 () | 52203..53549 | - | 1347 | WP_001132032.1 | hypothetical protein | - |
| HX136_RS25355 () | 53903..54505 | + | 603 | WP_000517694.1 | hypothetical protein | - |
| HX136_RS25360 () | 54561..55055 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| HX136_RS25365 () | 55055..55321 | + | 267 | WP_000955263.1 | hypothetical protein | - |
| HX136_RS25370 () | 55789..56262 | - | 474 | WP_001334658.1 | hypothetical protein | - |
| HX136_RS25375 () | 56379..57227 | - | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| HX136_RS25380 () | 57267..57548 | - | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HX136_RS25385 () | 57545..57814 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HX136_RS25390 () | 58181..59317 | + | 1137 | WP_001250345.1 | IS91 family transposase ISVsa3 | Transposase |
| HX136_RS25395 () | 59348..59581 | + | 234 | WP_072042932.1 | hypothetical protein | - |
| HX136_RS25400 () | 59782..60624 | + | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| HX136_RS25405 () | 60713..61504 | + | 792 | WP_001206316.1 | Streptomycin 3''-adenylyltransferase | ARG |
| HX136_RS25410 () | 61674..62006 | + | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| HX136_RS25415 () | 62271..62906 | - | 636 | Protein_76 | IS256 family transposase IS406 | Transposase |
| HX136_RS25420 () | 62908..63183 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| HX136_RS25425 () | 63186..63977 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| HX136_RS25430 () | 64446..64691 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| HX136_RS25435 () | 64729..65592 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| HX136_RS25440 () | 65738..65977 | - | 240 | WP_011264039.1 | macrolide transporter | - |
| HX136_RS25445 () | 66050..66754 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HX136_RS25450 () | 67140..67556 | + | 417 | WP_034169466.1 | Glutathione transferase FosA | ARG |
| HX136_RS25455 () | 67561..68079 | - | 519 | WP_034169467.1 | hypothetical protein | - |
| HX136_RS25460 () | 68079..68750 | - | 672 | Protein_85 | winged helix-turn-helix domain-containing protein | - |
| HX136_RS25465 () | 68804..69508 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HX136_RS25470 () | 69640..70500 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HX136_RS25475 () | 70990..72762 | - | 1773 | WP_001262767.1 | DUF262 domain-containing protein | - |
| HX136_RS25480 () | 72857..73837 | + | 981 | WP_032072169.1 | IS5 family transposase ISKpn26 | Transposase |
| HX136_RS25485 () | 74247..74648 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HX136_RS25490 () | 74581..74838 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HX136_RS25495 () | 74931..75584 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HX136_RS25500 () | 76520..77551 | - | 1032 | WP_000907870.1 | replication initiation protein | - |
| HX136_RS25505 () | 78524..78787 | + | 264 | WP_001324596.1 | ash family protein | - |
| HX136_RS25510 () | 78705..78992 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HX136_RS25515 () | 79434..79967 | + | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| HX136_RS25520 () | 80221..80904 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| HX136_RS25525 () | 81077..81628 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| HX136_RS25530 () | 81790..82044 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| HX136_RS25535 () | 82220..82516 | + | 297 | WP_000494779.1 | hypothetical protein | - |
| HX136_RS25540 () | 83140..84207 | + | 1068 | WP_001302629.1 | hypothetical protein | VF |
| HX136_RS25545 () | 84207..84644 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| HX136_RS25550 () | 84658..86340 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| HX136_RS25555 () | 86333..87628 | + | 1296 | WP_000752772.1 | hypothetical protein | VF |
| HX136_RS25560 () | 87615..88067 | + | 453 | WP_001247334.1 | hypothetical protein | VF |
| HX136_RS25565 () | 88078..89631 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HX136_RS25570 () | 89644..90741 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HX136_RS25575 () | 90759..91373 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| HX136_RS25580 () | 91383..91943 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| HX136_RS25585 () | 91928..92584 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| HX136_RS25590 () | 92584..93662 | + | 1079 | Protein_111 | hypothetical protein | VF |
| HX136_RS25595 () | 93659..93907 | - | 249 | WP_071535296.1 | hypothetical protein | - |
| HX136_RS25600 () | 94574..95728 | + | 1155 | WP_179231544.1 | integrase | - |
| HX136_RS25605 () | 95879..96703 | + | 825 | WP_001238939.1 | hypothetical protein | - |
| HX136_RS25610 () | 96788..97990 | + | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| HX136_RS25615 () | 98050..98634 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HX136_RS25620 () | 99029..99487 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| HX136_RS25625 () | 99484..100302 | + | 819 | WP_000646098.1 | hypothetical protein | VF |
| HX136_RS25630 () | 100299..101447 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| HX136_RS25635 () | 101444..101734 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| HX136_RS25640 () | 101749..102300 | + | 552 | WP_000014583.1 | Phospholipase D | VF |
| HX136_RS25645 () | 102388..106155 | + | 3768 | WP_001141527.1 | DNA primase | - |
| HX136_RS25650 () | 106173..106520 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HX136_RS25655 () | 106517..107209 | + | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| HX136_RS25660 () | 107220..108203 | + | 984 | WP_001191877.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|