MGE detailed information
MGE type: Prophage MGE length: 47761 bp
Accession: NZ_CP058209 Location: 1032972..1080732 Organism: Escherichia marmotae strain RHB24-C12 Replicon: chromosome
Accession: NZ_CP058209 Location: 1032972..1080732 Organism: Escherichia marmotae strain RHB24-C12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVY12_RS05260 () | 1028117..1028704 | - | 588 | WP_000003648.1 | hydrogenase 1 maturation protease | - |
| HVY12_RS05265 () | 1028701..1029411 | - | 711 | WP_001156752.1 | Ni/Fe-hydrogenase b-type cytochrome subunit | - |
| HVY12_RS05270 () | 1029430..1031223 | - | 1794 | WP_001516140.1 | Ni/Fe-hydrogenase large subunit | - |
| HVY12_RS05275 () | 1031220..1032338 | - | 1119 | WP_001516139.1 | hydrogenase 1 small subunit | - |
| HVY12_RS05285 () | 1032972..1033556 | - | 585 | WP_181237983.1 | DUF4376 domain-containing protein | - |
| HVY12_RS05290 () | 1033570..1036344 | - | 2775 | WP_181237984.1 | prophage tail fiber N-terminal domain-containing protein | - |
| HVY12_RS05295 () | 1036409..1037032 | - | 624 | WP_001408020.1 | Attachment invasion locus protein | VF |
| HVY12_RS05300 () | 1037101..1040583 | - | 3483 | WP_181237985.1 | host specificity protein J | - |
| HVY12_RS05305 () | 1040644..1041246 | - | 603 | WP_050496112.1 | tail assembly protein | - |
| HVY12_RS05310 () | 1041183..1041926 | - | 744 | WP_181237986.1 | C40 family peptidase | - |
| HVY12_RS05315 () | 1041932..1042630 | - | 699 | WP_181237987.1 | phage minor tail protein L | - |
| HVY12_RS05320 () | 1042630..1042959 | - | 330 | WP_000447243.1 | phage tail protein | - |
| HVY12_RS05325 () | 1042959..1045991 | - | 3033 | WP_181237988.1 | phage tail tape measure protein | - |
| HVY12_RS05330 () | 1045975..1046289 | - | 315 | WP_077826222.1 | phage tail assembly protein T | - |
| HVY12_RS05335 () | 1046298..1046687 | - | 390 | WP_181237989.1 | phage minor tail protein G | - |
| HVY12_RS05340 () | 1046748..1047518 | - | 771 | WP_181237990.1 | phage tail protein | - |
| HVY12_RS05345 () | 1047541..1047942 | - | 402 | WP_096982005.1 | phage minor tail U family protein | - |
| HVY12_RS05350 () | 1047939..1048517 | - | 579 | WP_105457193.1 | phage tail protein | - |
| HVY12_RS05355 () | 1048528..1048803 | - | 276 | WP_024167196.1 | DNA breaking-rejoining protein | - |
| HVY12_RS05360 () | 1048796..1049119 | - | 324 | WP_001373040.1 | DUF2190 family protein | - |
| HVY12_RS05365 () | 1049207..1051267 | - | 2061 | WP_137659487.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HVY12_RS05370 () | 1051212..1052717 | - | 1506 | WP_157713941.1 | phage portal protein | - |
| HVY12_RS05375 () | 1052717..1052929 | - | 213 | WP_001373035.1 | hypothetical protein | - |
| HVY12_RS05380 () | 1052926..1055028 | - | 2103 | WP_181237991.1 | phage terminase large subunit family protein | - |
| HVY12_RS05385 () | 1055028..1055519 | - | 492 | WP_001541482.1 | DUF1441 family protein | - |
| HVY12_RS05390 () | 1055981..1056277 | - | 297 | WP_181238199.1 | hypothetical protein | - |
| HVY12_RS05395 () | 1056452..1056634 | - | 183 | WP_143367358.1 | hypothetical protein | - |
| HVY12_RS05400 () | 1056649..1057026 | - | 378 | WP_000014554.1 | M15 family metallopeptidase | - |
| HVY12_RS05405 () | 1057029..1057305 | - | 277 | Protein_1065 | phage holin family protein | - |
| HVY12_RS05410 () | 1057295..1057687 | - | 393 | WP_181237992.1 | holin | - |
| HVY12_RS05415 () | 1057778..1057930 | - | 153 | WP_000833649.1 | DUF3927 family protein | - |
| HVY12_RS05420 () | 1057927..1058352 | - | 426 | WP_000466931.1 | tellurite/colicin resistance protein | - |
| HVY12_RS05445 () | 1059464..1060510 | - | 1047 | WP_181237993.1 | site-specific DNA-methyltransferase | - |
| HVY12_RS05450 () | 1060661..1060858 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| HVY12_RS05455 () | 1061079..1061579 | - | 501 | WP_063084977.1 | hypothetical protein | - |
| HVY12_RS05460 () | 1061561..1061941 | - | 381 | WP_000090267.1 | late gene antiterminator protein | - |
| HVY12_RS05465 () | 1061931..1062302 | - | 372 | WP_112041967.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HVY12_RS05470 () | 1062315..1063361 | - | 1047 | WP_181237994.1 | DUF968 domain-containing protein | - |
| HVY12_RS05475 () | 1063363..1063635 | - | 273 | WP_012565094.1 | hypothetical protein | - |
| HVY12_RS05480 () | 1063802..1064014 | - | 213 | WP_000018423.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HVY12_RS05485 () | 1064248..1064508 | - | 261 | WP_063123881.1 | hypothetical protein | - |
| HVY12_RS05490 () | 1064548..1064820 | - | 273 | Protein_1078 | hypothetical protein | - |
| HVY12_RS05495 () | 1064824..1065228 | - | 405 | WP_181237995.1 | hypothetical protein | - |
| HVY12_RS05500 () | 1065367..1065726 | - | 360 | WP_063123852.1 | hypothetical protein | - |
| HVY12_RS05505 () | 1065723..1065899 | - | 177 | WP_000753067.1 | hypothetical protein | - |
| HVY12_RS05510 () | 1065892..1066074 | - | 183 | WP_024238437.1 | hypothetical protein | - |
| HVY12_RS05515 () | 1066170..1066694 | - | 525 | WP_097333611.1 | ead/Ea22-like family protein | - |
| HVY12_RS05520 () | 1066681..1066947 | - | 267 | WP_000004320.1 | hypothetical protein | - |
| HVY12_RS05525 () | 1066944..1067336 | - | 393 | WP_181237996.1 | DUF977 family protein | - |
| HVY12_RS05530 () | 1067351..1068097 | - | 747 | WP_181237997.1 | IS21 family transposase ISCARN58 | Transposase |
| HVY12_RS05535 () | 1068104..1069051 | - | 948 | WP_089569406.1 | helix-turn-helix domain-containing protein | - |
| HVY12_RS05540 () | 1069075..1069500 | - | 426 | WP_053272758.1 | Rha family transcriptional regulator | - |
| HVY12_RS05545 () | 1069497..1069799 | - | 303 | WP_000172735.1 | transcriptional regulator | - |
| HVY12_RS05550 () | 1069897..1070268 | + | 372 | WP_001169685.1 | hypothetical protein | - |
| HVY12_RS05555 () | 1070289..1070480 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| HVY12_RS05560 () | 1070482..1070760 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HVY12_RS05565 () | 1071044..1071196 | + | 153 | WP_000379570.1 | DUF1391 family protein | - |
| HVY12_RS05570 () | 1071208..1071582 | + | 375 | WP_181237998.1 | hypothetical protein | - |
| HVY12_RS05575 () | 1071661..1072107 | - | 447 | WP_181237999.1 | hypothetical protein | - |
| HVY12_RS05580 () | 1072796..1072984 | + | 189 | WP_042973094.1 | cell division inhibition protein DicB | - |
| HVY12_RS05585 () | 1072981..1073184 | + | 204 | WP_001090192.1 | DUF1482 family protein | - |
| HVY12_RS05590 () | 1073262..1074047 | + | 786 | Protein_1098 | exonuclease | - |
| HVY12_RS05595 () | 1074146..1074901 | - | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| HVY12_RS05600 () | 1074918..1076453 | - | 1536 | WP_000447015.1 | IS21 family transposase ISSso4 | Transposase |
| HVY12_RS05605 () | 1077666..1078358 | + | 693 | WP_181238200.1 | exonuclease | - |
| HVY12_RS05610 () | 1078425..1078676 | + | 252 | WP_021564129.1 | DUF4224 domain-containing protein | - |
| HVY12_RS05615 () | 1078645..1079664 | + | 1020 | WP_001372523.1 | hypothetical protein ; Integrase | Integrase |
| HVY12_RS05620 () | 1080073..1080732 | + | 660 | WP_000375136.1 | FtsH protease modulator YccA | - |
| HVY12_RS05625 () | 1080824..1081153 | + | 330 | WP_010376933.1 | sulfurtransferase TusE | - |
| HVY12_RS05630 () | 1081150..1081428 | - | 279 | WP_016248563.1 | acylphosphatase | - |
| HVY12_RS05635 () | 1081523..1082713 | + | 1191 | WP_115775620.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| HVY12_RS05640 () | 1082771..1083088 | + | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| HVY12_RS05645 () | 1083133..1083546 | - | 414 | WP_115775619.1 | CoA-binding protein | - |
| HVY12_RS05650 () | 1083719..1084381 | + | 663 | WP_115775618.1 | DUF2057 family protein | - |
| HVY12_RS05655 () | 1084477..1084935 | + | 459 | WP_001516135.1 | methylglyoxal synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|