MGE detailed information
MGE type: Conjugative plasmid MGE length: 107745 bp
Accession: NZ_CP057464 Location: 1..107745 Organism: Escherichia fergusonii strain RHB26-C03 Replicon: plasmid pRHB26-C03_2
Accession: NZ_CP057464 Location: 1..107745 Organism: Escherichia fergusonii strain RHB26-C03 Replicon: plasmid pRHB26-C03_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HVY27_RS22515 () | 46..1077 | + | 1032 | WP_000907861.1 | replication initiation protein | - |
| HVY27_RS22520 () | 1985..2269 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| HVY27_RS22525 () | 2269..2544 | + | 276 | WP_001582571.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HVY27_RS22530 () | 2650..2928 | + | 279 | WP_001105069.1 | hypothetical protein | - |
| HVY27_RS22535 () | 3123..3389 | - | 267 | WP_000627829.1 | hypothetical protein | - |
| HVY27_RS22540 () | 3389..3660 | - | 272 | Protein_5 | hypothetical protein | - |
| HVY27_RS22545 () | 3716..4318 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| HVY27_RS22550 () | 4672..6018 | + | 1347 | WP_115978218.1 | hypothetical protein | - |
| HVY27_RS22555 () | 6297..8177 | + | 1881 | WP_001619592.1 | colicin 1A | - |
| HVY27_RS22560 () | 8199..8534 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| HVY27_RS22565 () | 8663..9010 | + | 348 | WP_001582578.1 | hypothetical protein | - |
| HVY27_RS22570 () | 9030..9620 | - | 591 | WP_000194572.1 | hypothetical protein | - |
| HVY27_RS22575 () | 9620..9874 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| HVY27_RS22580 () | 10443..10856 | + | 414 | WP_032082921.1 | hypothetical protein | - |
| HVY27_RS22585 () | 10858..11637 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| HVY27_RS22590 () | 11817..12461 | + | 645 | WP_001144036.1 | ParA family protein | - |
| HVY27_RS22595 () | 12548..12856 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| HVY27_RS22600 () | 13270..14250 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HVY27_RS22605 () | 14243..14659 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HVY27_RS22610 () | 14661..15935 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| HVY27_RS22615 () | 15935..16372 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HVY27_RS22620 () | 16369..16617 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HVY27_RS22625 () | 17035..17937 | + | 903 | WP_001739825.1 | DUF1281 domain-containing protein | - |
| HVY27_RS22630 () | 17934..18245 | + | 312 | WP_031942433.1 | hypothetical protein | - |
| HVY27_RS22635 () | 18474..20174 | - | 1701 | WP_021579017.1 | group II intron reverse transcriptase/maturase | - |
| HVY27_RS22640 () | 20754..21407 | + | 654 | WP_139385721.1 | DNA methylase | - |
| HVY27_RS22645 () | 21408..21629 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HVY27_RS22650 () | 21643..22077 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| HVY27_RS22655 () | 22123..22899 | + | 777 | WP_047089256.1 | hypothetical protein | - |
| HVY27_RS22660 () | 23434..23736 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| HVY27_RS22665 () | 23783..24205 | + | 423 | WP_000271763.1 | DUF1380 family protein | - |
| HVY27_RS22670 () | 24202..24393 | + | 192 | WP_181671538.1 | hypothetical protein | - |
| HVY27_RS22675 () | 24465..24779 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| HVY27_RS22680 () | 25816..27717 | + | 1902 | WP_000936285.1 | group II intron reverse transcriptase/maturase | - |
| HVY27_RS22685 () | 27867..28352 | + | 486 | WP_077888078.1 | single-stranded DNA-binding protein | - |
| HVY27_RS22690 () | 28409..28642 | + | 234 | WP_001042947.1 | DUF905 domain-containing protein | - |
| HVY27_RS22695 () | 28704..30662 | + | 1959 | WP_000117799.1 | ParB/RepB/Spo0J family partition protein | - |
| HVY27_RS22700 () | 30717..31151 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| HVY27_RS22705 () | 31148..31867 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| HVY27_RS22710 () | 31864..32460 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| HVY27_RS22715 () | 32923..33423 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| HVY27_RS22720 () | 34152..34586 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| HVY27_RS22725 () | 34680..34946 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| HVY27_RS22730 () | 35011..35889 | + | 879 | WP_061157248.1 | Recombination-promoting nuclease RpnA | VF |
| HVY27_RS22735 () | 35951..36157 | + | 207 | WP_001532090.1 | hypothetical protein | VF |
| HVY27_RS22740 () | 36188..36439 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| HVY27_RS22745 () | 36548..36775 | - | 228 | WP_072279834.1 | hypothetical protein | - |
| HVY27_RS22750 () | 37019..37867 | + | 849 | WP_001077032.1 | DUF4942 domain-containing protein | - |
| HVY27_RS22755 () | 37953..38288 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HVY27_RS22760 () | 38522..38854 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HVY27_RS22765 () | 38865..41564 | + | 2700 | WP_061348418.1 | Protein TraI | Relaxase |
| HVY27_RS22770 () | 41590..42162 | + | 573 | WP_000332079.1 | hypothetical protein | - |
| HVY27_RS22775 () | 42212..44401 | - | 2190 | WP_061348417.1 | peptidase domain-containing ABC transporter | - |
| HVY27_RS22780 () | 44401..45654 | - | 1254 | WP_001685252.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| HVY27_RS22785 () | 45757..46392 | - | 636 | WP_000999378.1 | CPBP family intramembrane metalloprotease | - |
| HVY27_RS22790 () | 47177..49468 | - | 2292 | WP_072279833.1 | conjugal transfer protein TrbC | - |
| HVY27_RS22795 () | 49461..50531 | - | 1071 | WP_052895276.1 | IncI1-type conjugal transfer protein TrbB | - |
| HVY27_RS22800 () | 50550..51758 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 51938..52000 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51938..52000 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51938..52000 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 51938..52000 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| HVY27_RS22805 () | 52050..52202 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| HVY27_RS22810 () | 52274..52525 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| HVY27_RS22815 () | 52666..53316 | + | 651 | WP_024244070.1 | IS66 family transposase IS679 | Transposase |
| HVY27_RS22820 () | 53316..53663 | + | 348 | WP_024244069.1 | IS66 family transposase ISCro1 | Transposase |
| HVY27_RS22825 () | 53683..55254 | + | 1572 | WP_115978212.1 | IS66 family transposase ISCro1 | Transposase |
| HVY27_RS22830 () | 55398..55537 | + | 140 | Protein_63 | transposase domain-containing protein | - |
| HVY27_RS22835 () | 55579..56106 | - | 528 | WP_000182867.1 | hypothetical protein | - |
| HVY27_RS22840 () | 56596..57291 | - | 696 | WP_050866967.1 | lactate utilization protein C | - |
| HVY27_RS22845 () | 57295..58710 | - | 1416 | WP_000054156.1 | iron-sulfur cluster-binding protein | - |
| HVY27_RS22850 () | 58721..59440 | - | 720 | WP_001102090.1 | (Fe-S)-binding protein | - |
| HVY27_RS22855 () | 59490..61046 | - | 1557 | WP_000544018.1 | L-lactate permease | - |
| HVY27_RS22860 () | 61625..62008 | + | 384 | WP_001201739.1 | IS66 family transposase IS682 | Transposase |
| HVY27_RS22865 () | 62005..62352 | + | 348 | WP_000609174.1 | IS66 family transposase ISCfr14 | Transposase |
| HVY27_RS22870 () | 62402..63936 | + | 1535 | Protein_71 | IS66 family transposase ISSgsp1 | Transposase |
| HVY27_RS22875 () | 63970..64311 | + | 342 | Protein_72 | transposase | - |
| - () | 64681..64732 | - | 52 | NuclAT_1 | - | - |
| - () | 64681..64732 | - | 52 | NuclAT_1 | - | - |
| - () | 64681..64732 | - | 52 | NuclAT_1 | - | - |
| - () | 64681..64732 | - | 52 | NuclAT_1 | - | - |
| HVY27_RS22880 () | 65218..65394 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| HVY27_RS22885 () | 65786..65995 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| HVY27_RS22890 () | 66067..66729 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HVY27_RS22895 () | 66800..68968 | - | 2169 | WP_061348430.1 | DotA/TraY family protein | - |
| HVY27_RS22900 () | 69065..69649 | - | 585 | WP_061348429.1 | IncI1-type conjugal transfer protein TraX | - |
| HVY27_RS22905 () | 69678..70880 | - | 1203 | WP_069906147.1 | IncI1-type conjugal transfer protein TraW | - |
| HVY27_RS22910 () | 70847..71461 | - | 615 | WP_000337400.1 | IncI1-type conjugal transfer protein TraV | - |
| HVY27_RS22915 () | 71461..74505 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| HVY27_RS22920 () | 74595..75395 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HVY27_RS22925 () | 75379..75567 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HVY27_RS22930 () | 75631..76035 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| HVY27_RS22935 () | 76086..76613 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HVY27_RS22940 () | 76613..77317 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HVY27_RS22945 () | 77317..78606 | - | 1290 | WP_061348428.1 | conjugal transfer protein TraO | - |
| HVY27_RS22950 () | 78609..79592 | - | 984 | WP_061348427.1 | hypothetical protein | VF |
| HVY27_RS22955 () | 79603..80295 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| HVY27_RS22960 () | 80292..80639 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HVY27_RS22965 () | 80657..84424 | - | 3768 | WP_115978214.1 | DNA primase | - |
| HVY27_RS22970 () | 84514..85065 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| HVY27_RS22975 () | 85080..85370 | - | 291 | WP_001372180.1 | hypothetical protein | - |
| HVY27_RS22980 () | 85367..86515 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| HVY27_RS22985 () | 86512..87330 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| HVY27_RS22990 () | 87327..87785 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| HVY27_RS22995 () | 88180..88764 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HVY27_RS23000 () | 88824..90026 | - | 1203 | WP_061348425.1 | conjugal transfer protein TraF | - |
| HVY27_RS23005 () | 90112..90936 | - | 825 | WP_001238942.1 | hypothetical protein | - |
| HVY27_RS23010 () | 91144..91269 | + | 126 | Protein_99 | transposase | - |
| HVY27_RS23015 () | 91326..92618 | - | 1293 | WP_001350014.1 | hypothetical protein | VF |
| HVY27_RS23020 () | 92618..93274 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| HVY27_RS23025 () | 93259..93819 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| HVY27_RS23030 () | 93829..94443 | - | 615 | WP_000908226.1 | hypothetical protein | VF |
| HVY27_RS23035 () | 94460..95545 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HVY27_RS23040 () | 95558..97111 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| HVY27_RS23045 () | 97122..97574 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| HVY27_RS23050 () | 97561..98856 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| HVY27_RS23055 () | 98849..100531 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| HVY27_RS23060 () | 100545..100982 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| HVY27_RS23065 () | 100982..102049 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| HVY27_RS23070 () | 102968..103264 | - | 297 | WP_086055099.1 | pilJ | - |
| HVY27_RS23075 () | 103298..103552 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| HVY27_RS23080 () | 103714..104265 | - | 552 | WP_000744646.1 | hypothetical protein | - |
| HVY27_RS23085 () | 104438..105121 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| HVY27_RS23090 () | 105374..105907 | - | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| HVY27_RS23095 () | 106349..106636 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HVY27_RS23100 () | 106554..106817 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|