MGE detailed information
MGE type: Conjugative plasmid MGE length: 171701 bp
Accession: NZ_CP056374 Location: 1..171701 Organism: Klebsiella pneumoniae strain RHBSTW-00636 Replicon: plasmid pRHBSTW-00636_3
Accession: NZ_CP056374 Location: 1..171701 Organism: Klebsiella pneumoniae strain RHBSTW-00636 Replicon: plasmid pRHBSTW-00636_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
HV253_RS27150 () | 19..894 | + | 876 | WP_004197644.1 | RepB family plasmid replication initiator protein | - |
HV253_RS27155 () | 1518..2144 | + | 627 | WP_004197649.1 | Iron-sulfur cluster carrier protein | VF |
HV253_RS27160 () | 2264..2443 | + | 180 | WP_006788217.1 | hypothetical protein | - |
HV253_RS27165 () | 2883..3677 | - | 795 | WP_004197635.1 | site-specific integrase | - |
HV253_RS27170 () | 3875..4891 | - | 1017 | WP_004197639.1 | hypothetical protein | - |
HV253_RS27175 () | 4888..5211 | - | 324 | WP_004197641.1 | hypothetical protein | - |
HV253_RS27180 () | 5238..5639 | - | 402 | WP_072199347.1 | hypothetical protein | - |
HV253_RS27185 () | 5808..6113 | - | 306 | WP_004197633.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
HV253_RS27190 () | 6115..6333 | - | 219 | WP_004197642.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
HV253_RS27195 () | 6873..7826 | + | 954 | WP_168380100.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
HV253_RS27200 () | 7896..8593 | + | 698 | Protein_10 | IS1 family transposase IS1X2 | Transposase |
HV253_RS27205 () | 8644..9363 | - | 720 | WP_040119806.1 | GntR family transcriptional regulator | - |
HV253_RS27210 () | 9400..10068 | - | 669 | WP_048293710.1 | cysteine hydrolase | - |
HV253_RS27215 () | 10065..11603 | - | 1539 | WP_040119823.1 | ABC transporter ATP-binding protein | - |
HV253_RS27220 () | 11606..12295 | - | 690 | WP_040119808.1 | cysteine hydrolase | - |
HV253_RS27225 () | 12302..13306 | - | 1005 | WP_048293709.1 | formamidase | - |
HV253_RS27230 () | 13319..14239 | - | 921 | WP_080925047.1 | ABC transporter permease | - |
HV253_RS27235 () | 14232..15338 | - | 1107 | WP_048293708.1 | ABC transporter permease | - |
HV253_RS27240 () | 15348..16454 | - | 1107 | WP_040119811.1 | BMP family ABC transporter substrate-binding protein | - |
HV253_RS27245 () | 16483..18267 | - | 1785 | WP_040119812.1 | allophanate hydrolase | - |
HV253_RS27250 () | 18666..19646 | - | 981 | WP_181486933.1 | IS5 family transposase ISKpn26 | Transposase |
HV253_RS27255 () | 19882..20163 | + | 282 | WP_001568067.1 | hypothetical protein | - |
HV253_RS27260 () | 20217..20828 | + | 612 | WP_000176305.1 | DUF2913 family protein | - |
HV253_RS27265 () | 20825..20986 | - | 162 | WP_011977825.1 | hypothetical protein | - |
HV253_RS27270 () | 21013..22005 | - | 993 | WP_001145103.1 | hypothetical protein | - |
HV253_RS27275 () | 22054..22209 | - | 156 | WP_000075580.1 | hypothetical protein | - |
HV253_RS27280 () | 22350..23054 | + | 705 | WP_033545665.1 | IS6 family transposase IS26 | Transposase |
HV253_RS27285 () | 23213..23770 | - | 558 | Protein_27 | hypothetical protein | VF |
HV253_RS27290 () | 23805..24773 | + | 969 | WP_074424873.1 | IS5 family transposase IS903B | Transposase |
HV253_RS27295 () | 25091..26116 | - | 1026 | WP_001101446.1 | IS110 family transposase ISAve1 | Transposase |
HV253_RS27300 () | 26113..26471 | - | 359 | Protein_30 | alcohol dehydrogenase catalytic domain-containing protein | - |
HV253_RS27305 () | 26492..27271 | - | 780 | WP_023302482.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
HV253_RS27310 () | 27339..28730 | - | 1392 | WP_023302483.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
HV253_RS27315 () | 28775..30190 | - | 1416 | WP_023302484.1 | NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta | - |
HV253_RS27320 () | 30192..30500 | - | 309 | WP_023302485.1 | NAD(P) transhydrogenase subunit alpha | - |
HV253_RS27325 () | 30497..31651 | - | 1155 | WP_032427337.1 | NAD(P) transhydrogenase subunit alpha | - |
HV253_RS27330 () | 31816..32436 | + | 621 | WP_065807430.1 | TetR/AcrR family transcriptional regulator | - |
HV253_RS27335 () | 32528..32884 | + | 357 | WP_023302488.1 | hypothetical protein | - |
HV253_RS27340 () | 32917..33933 | + | 1017 | WP_014640837.1 | IS5 family transposase IS5D | Transposase |
HV253_RS27345 () | 34082..34555 | + | 474 | Protein_39 | MltR family transcriptional regulator | - |
HV253_RS27350 () | 34561..34776 | - | 216 | WP_065807480.1 | hypothetical protein | - |
HV253_RS27355 () | 34960..35127 | + | 168 | Protein_41 | IS5 family transposase IS5D | Transposase |
HV253_RS27360 () | 35163..36770 | - | 1608 | Protein_42 | Tn3 family transposase TnpA_Tn5403 | Transposase |
HV253_RS27365 () | 36814..39711 | - | 2898 | WP_103927134.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
HV253_RS27370 () | 39806..40411 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
HV253_RS27375 () | 40445..40956 | - | 512 | Protein_45 | IS1 family transposase IS1X2 | Transposase |
HV253_RS27380 () | 41113..41556 | + | 444 | WP_064188129.1 | ribbon-helix-helix protein, CopG family | - |
HV253_RS27385 () | 41628..41900 | - | 273 | WP_019405140.1 | hypothetical protein | - |
HV253_RS27390 () | 42380..42652 | - | 273 | Protein_48 | IS1 family transposase IS1X2 | Transposase |
HV253_RS27395 () | 42781..44184 | + | 1404 | WP_072094655.1 | DNA cytosine methyltransferase | - |
HV253_RS27400 () | 44218..45432 | - | 1215 | WP_005012528.1 | type II site-specific deoxyribonuclease | - |
HV253_RS27405 () | 45672..46241 | + | 570 | WP_001749988.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
HV253_RS27410 () | 46573..49695 | - | 3123 | WP_181486934.1 | type I restriction endonuclease subunit R | - |
HV253_RS27415 () | 49817..50572 | - | 756 | WP_177331404.1 | restriction endonuclease subunit S | - |
HV253_RS27425 () | 51805..52416 | - | 612 | WP_179136390.1 | cupin domain-containing protein | - |
HV253_RS27430 () | 52633..53184 | + | 552 | WP_064180986.1 | chromate transporter | - |
HV253_RS27435 () | 53178..53711 | + | 534 | WP_177331403.1 | chromate transporter | - |
HV253_RS27440 () | 53994..54833 | + | 840 | WP_064180982.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
HV253_RS27445 () | 54823..55704 | + | 882 | WP_077268274.1 | ABC transporter permease | - |
HV253_RS27450 () | 55704..56774 | + | 1071 | WP_064180981.1 | ABC transporter permease | - |
HV253_RS27455 () | 56822..57838 | + | 1017 | WP_064180980.1 | ABC transporter substrate-binding protein | - |
HV253_RS27460 () | 57880..58527 | + | 648 | WP_064180979.1 | hypothetical protein | VF |
HV253_RS27465 () | 58763..60151 | + | 1389 | WP_087794593.1 | NAD(P)-dependent oxidoreductase | - |
HV253_RS27470 () | 60144..61448 | + | 1305 | WP_064180977.1 | NAD-dependent dihydropyrimidine dehydrogenase subunit PreA | - |
HV253_RS27475 () | 61532..62980 | + | 1449 | WP_064180976.1 | dihydropyrimidinase | - |
HV253_RS27480 () | 63005..64291 | + | 1287 | WP_064180975.1 | Acetylornithine deacetylase | VF |
HV253_RS27485 () | 64654..65358 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
HV253_RS27490 () | 66861..67718 | - | 858 | WP_181486923.1 | incFII family plasmid replication initiator RepA | - |
HV253_RS27495 () | 67711..67788 | - | 78 | WP_020804505.1 | RepA leader peptide Tap | - |
HV253_RS27500 () | 68004..68282 | - | 279 | WP_004099069.1 | replication regulatory protein RepA | - |
HV253_RS27505 () | 68603..69082 | - | 480 | WP_064762441.1 | Cardiolipin synthase B | VF |
HV253_RS27510 () | 69384..69641 | - | 258 | WP_099459485.1 | bacteriocin immunity protein | - |
HV253_RS27515 () | 69671..70368 | - | 698 | Protein_73 | IS1 family transposase ISKpn14 | Transposase |
HV253_RS27520 () | 70608..72650 | - | 2043 | WP_020805034.1 | DUF262 domain-containing HNH endonuclease family protein | - |
HV253_RS27525 () | 72643..74094 | - | 1452 | WP_000443938.1 | DUF262 domain-containing protein | - |
HV253_RS27530 () | 74119..74427 | - | 309 | Protein_76 | DDE-type integrase/transposase/recombinase | - |
HV253_RS27535 () | 74444..74683 | - | 240 | Protein_77 | IS110 family transposase | - |
HV253_RS27540 () | 74682..74867 | - | 186 | Protein_78 | IS1 family transposase | - |
HV253_RS27545 () | 74954..75709 | - | 756 | WP_009310009.1 | M48 family metallopeptidase | - |
HV253_RS27550 () | 75706..78990 | - | 3285 | WP_013214044.1 | type I restriction endonuclease subunit R | - |
HV253_RS27555 () | 79043..79726 | - | 684 | WP_020803820.1 | YecA family protein | - |
HV253_RS27560 () | 79723..80916 | - | 1194 | WP_072271181.1 | restriction endonuclease subunit S | - |
HV253_RS27565 () | 80963..82486 | - | 1524 | WP_013214042.1 | type I restriction-modification system subunit M | - |
HV253_RS27570 () | 82790..83487 | - | 698 | Protein_84 | IS1 family transposase | - |
HV253_RS27575 () | 83619..84221 | - | 603 | WP_015060010.1 | hypothetical protein | - |
HV253_RS27580 () | 84382..84975 | - | 594 | WP_004152380.1 | fertility inhibition protein FinO | - |
HV253_RS27585 () | 85047..85772 | - | 726 | WP_016831060.1 | type-F conjugative transfer system pilin acetylase TraX | - |
HV253_RS27590 () | 85853..91111 | - | 5259 | WP_042922338.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
HV253_RS27595 () | 91111..93423 | - | 2313 | Protein_89 | type IV conjugative transfer system coupling protein TraD | - |
HV253_RS27600 () | 93550..94239 | - | 690 | WP_013023831.1 | hypothetical protein | - |
HV253_RS27605 () | 94432..95049 | - | 618 | WP_015065642.1 | hypothetical protein | - |
HV253_RS27610 () | 95015..95161 | - | 147 | WP_004197893.1 | hypothetical protein | - |
HV253_RS27615 () | 95350..95880 | - | 531 | WP_074187241.1 | conjugal transfer protein TraS | - |
HV253_RS27620 () | 95883..98732 | - | 2850 | WP_042922342.1 | conjugal transfer mating pair stabilization protein TraG | - |
HV253_RS27625 () | 98732..100111 | - | 1380 | WP_074187239.1 | F-type conjugal transfer protein TraH | - |
HV253_RS27630 () | 100089..100532 | - | 444 | WP_181486932.1 | F-type conjugal transfer protein TrbF | - |
HV253_RS27635 () | 100578..101135 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
HV253_RS27640 () | 101107..101346 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
HV253_RS27645 () | 101357..102109 | - | 753 | WP_048288586.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
HV253_RS27650 () | 102130..102456 | - | 327 | WP_016529362.1 | hypothetical protein | - |
HV253_RS27655 () | 102684..102920 | - | 237 | WP_042922352.1 | conjugal transfer protein TrbE | - |
HV253_RS27660 () | 102952..104907 | - | 1956 | WP_015065636.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
HV253_RS27665 () | 104966..105604 | - | 639 | WP_015065635.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
HV253_RS27670 () | 105617..106606 | - | 990 | WP_009309872.1 | conjugal transfer pilus assembly protein TraU | - |
HV253_RS27675 () | 106603..106992 | - | 390 | WP_042922355.1 | hypothetical protein | - |
HV253_RS27680 () | 107034..107660 | - | 627 | WP_009309871.1 | type-F conjugative transfer system protein TraW | - |
HV253_RS27685 () | 107660..108049 | - | 390 | WP_004152591.1 | type-F conjugative transfer system protein TrbI | - |
HV253_RS27690 () | 108049..110688 | - | 2640 | WP_042922359.1 | type IV secretion system protein TraC | - |
HV253_RS27695 () | 110760..111158 | - | 399 | WP_023179972.1 | hypothetical protein | - |
HV253_RS27700 () | 111536..111940 | - | 405 | WP_004197817.1 | hypothetical protein | - |
HV253_RS27705 () | 112007..112318 | - | 312 | WP_004195465.1 | hypothetical protein | - |
HV253_RS27710 () | 112319..112537 | - | 219 | WP_004195468.1 | hypothetical protein | - |
HV253_RS27715 () | 112643..113053 | - | 411 | WP_009309869.1 | hypothetical protein | - |
HV253_RS27720 () | 113185..113769 | - | 585 | WP_009309868.1 | type IV conjugative transfer system lipoprotein TraV | - |
HV253_RS27725 () | 113883..115307 | - | 1425 | WP_042922367.1 | conjugal transfer protein TraB | - |
HV253_RS27730 () | 115307..116047 | - | 741 | WP_015065528.1 | type-F conjugative transfer system secretin TraK | - |
HV253_RS27735 () | 116034..116600 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
HV253_RS27740 () | 116620..116925 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
HV253_RS27745 () | 116939..117307 | - | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
HV253_RS27750 () | 117361..117732 | - | 372 | WP_004208838.1 | TraY domain-containing protein | - |
HV253_RS27755 () | 117816..118511 | - | 696 | WP_072271345.1 | transcriptional regulator TraJ family protein | - |
HV253_RS27760 () | 118718..119110 | - | 393 | WP_032441878.1 | relaxosome protein TraM | - |
HV253_RS27765 () | 119545..120030 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
HV253_RS27770 () | 120063..120392 | - | 330 | WP_011977736.1 | hypothetical protein | - |
HV253_RS27775 () | 120425..121246 | - | 822 | WP_023316395.1 | DUF945 domain-containing protein | - |
HV253_RS27780 () | 122074..122487 | - | 414 | WP_021312979.1 | helix-turn-helix domain-containing protein | - |
HV253_RS27785 () | 122488..122766 | - | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
HV253_RS27790 () | 122756..123076 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
HV253_RS27795 () | 123157..123381 | - | 225 | WP_014343499.1 | hypothetical protein | - |
HV253_RS27800 () | 123392..123604 | - | 213 | WP_019706020.1 | hypothetical protein | - |
HV253_RS27805 () | 123665..124021 | - | 357 | WP_019706019.1 | hypothetical protein | - |
HV253_RS27810 () | 124862..125179 | - | 318 | WP_015065519.1 | hypothetical protein | - |
HV253_RS27815 () | 125194..125544 | - | 351 | WP_032425551.1 | hypothetical protein | - |
HV253_RS27820 () | 125541..125813 | - | 273 | WP_032425552.1 | hypothetical protein | - |
HV253_RS27825 () | 126669..127781 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
HV253_RS27830 () | 127860..128018 | - | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
HV253_RS27835 () | 128090..129124 | + | 1035 | Protein_137 | IS481 family transposase ISKpn28 | Transposase |
HV253_RS27840 () | 129191..129478 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
HV253_RS27845 () | 129478..129717 | - | 240 | WP_004196370.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
HV253_RS27850 () | 129968..130333 | + | 366 | WP_009651956.1 | hypothetical protein | - |
HV253_RS27855 () | 130377..131114 | + | 738 | WP_008460272.1 | HupE/UreJ family protein | - |
HV253_RS27860 () | 131128..131817 | + | 690 | WP_004196322.1 | hypothetical protein | - |
HV253_RS27865 () | 131848..133224 | - | 1377 | Protein_143 | chromate efflux transporter | - |
HV253_RS27870 () | 133181..134158 | - | 978 | WP_004196334.1 | chromate resistance protein | - |
HV253_RS27875 () | 134188..134380 | + | 193 | Protein_145 | MFS transporter | - |
HV253_RS27880 () | 134505..134876 | + | 372 | WP_004196359.1 | hypothetical protein | - |
HV253_RS27885 () | 134939..135859 | + | 921 | WP_004196315.1 | hypothetical protein | - |
HV253_RS27890 () | 135913..136671 | + | 759 | WP_004196325.1 | hypothetical protein | - |
HV253_RS27895 () | 136905..138203 | + | 1299 | WP_004196314.1 | nickel resistance membrane nickel efflux protein NirA | - |
HV253_RS27900 () | 138309..138578 | + | 270 | WP_004196355.1 | nickel-sensing transcriptional repressor NcrB | - |
HV253_RS27905 () | 138591..139721 | + | 1131 | WP_004196366.1 | Ni(II)/Co(II) efflux transporter permease subunit NcrC | - |
HV253_RS27910 () | 139883..140305 | + | 423 | WP_032072095.1 | nickel resistance OB fold protein NcrY | - |
HV253_RS27915 () | 140561..141901 | - | 1341 | WP_004196353.1 | ISNCY family transposase ISCARN112 | Transposase |
HV253_RS27920 () | 142050..143015 | + | 966 | Protein_154 | IS481 family transposase ISKpn28 | Transposase |
HV253_RS27925 () | 143045..144637 | - | 1593 | WP_039264109.1 | IS66 family transposase ISEcl6 | Transposase |
HV253_RS27930 () | 144668..145018 | - | 351 | WP_021567584.1 | IS66 family transposase ISEcl6 | Transposase |
HV253_RS27935 () | 145015..145422 | - | 408 | WP_021567585.1 | IS66 family transposase ISCro1 | Transposase |
HV253_RS27940 () | 145509..145625 | + | 117 | Protein_158 | IS481 family transposase | - |
HV253_RS27945 () | 145957..148239 | - | 2283 | WP_162837909.1 | S8 family peptidase | - |
HV253_RS27950 () | 148445..149485 | - | 1041 | WP_009310020.1 | ATP-binding protein | - |
HV253_RS27960 () | 151231..151605 | - | 375 | WP_023280872.1 | hypothetical protein | - |
HV253_RS27965 () | 151661..151987 | - | 327 | WP_001568059.1 | hypothetical protein | - |
HV253_RS27970 () | 151984..152712 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
HV253_RS27975 () | 152709..153140 | - | 432 | WP_020804497.1 | conjugation system SOS inhibitor PsiB | - |
HV253_RS27980 () | 153185..155242 | - | 2058 | WP_009310025.1 | ParB/RepB/Spo0J family partition protein | - |
HV253_RS27985 () | 155312..155560 | - | 249 | WP_009310026.1 | DUF905 domain-containing protein | - |
HV253_RS27990 () | 155609..156151 | - | 543 | WP_020804498.1 | single-stranded DNA-binding protein | - |
HV253_RS27995 () | 156982..157545 | - | 564 | WP_009310029.1 | methyltransferase | - |
HV253_RS28000 () | 157593..158948 | - | 1356 | WP_009310030.1 | DUF3560 domain-containing protein | - |
HV253_RS28005 () | 159000..159230 | - | 231 | WP_009310031.1 | hypothetical protein | - |
HV253_RS28010 () | 159322..159549 | - | 228 | WP_001568050.1 | hypothetical protein | - |
HV253_RS28015 () | 160229..160549 | - | 321 | WP_001568049.1 | hypothetical protein | - |
HV253_RS28020 () | 160584..160838 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
HV253_RS28025 () | 161026..161217 | - | 192 | WP_001568047.1 | hypothetical protein | - |
HV253_RS28030 () | 161260..161766 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
HV253_RS28035 () | 161809..162237 | - | 429 | WP_004152356.1 | antirestriction protein | - |
HV253_RS28040 () | 162918..163685 | - | 768 | WP_013214013.1 | hypothetical protein | - |
HV253_RS28045 () | 163739..164158 | - | 420 | WP_029497570.1 | DUF1380 domain-containing protein | - |
HV253_RS28050 () | 164168..164389 | - | 222 | WP_001568042.1 | hypothetical protein | - |
HV253_RS28055 () | 164389..165090 | - | 702 | WP_080925034.1 | DNA methylase | - |
HV253_RS28060 () | 165527..165757 | - | 231 | WP_009309993.1 | hypothetical protein | - |
HV253_RS28065 () | 165818..166489 | - | 672 | WP_020804632.1 | plasmid partitioning/stability family protein | - |
HV253_RS28070 () | 166492..167463 | - | 972 | WP_001568038.1 | hypothetical protein | - |
HV253_RS28075 () | 167712..169199 | - | 1488 | WP_179128900.1 | group II intron reverse transcriptase/maturase | - |
HV253_RS28080 () | 169606..170037 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
HV253_RS28085 () | 170037..171308 | + | 1272 | WP_064138452.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|