MGE detailed information

MGE type: Conjugative plasmid        MGE length: 206605 bp
Accession: NZ_CP056257        Location: 1..206605         Organism: Citrobacter freundii strain RHBSTW-00902       Replicon: plasmid pRHBSTW-00902_2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HV319_RS24855 () 1..942 + 942 WP_165690017.1 replication initiator protein RepA -
HV319_RS24860 () 2302..2760 - 459 WP_040190671.1 helix-turn-helix transcriptional regulator -
HV319_RS24865 () 2822..3058 + 237 WP_032695943.1 tautomerase family protein -
HV319_RS24870 () 3294..3437 + 144 Protein_4 transposase -
HV319_RS24875 () 4189..6381 + 2193 WP_094169335.1 1,4-alpha-glucan branching enzyme -
HV319_RS24880 () 6511..7794 + 1284 WP_032690514.1 glucose-1-phosphate adenylyltransferase -
HV319_RS24885 () 7884..9317 + 1434 WP_040190721.1 glycogen synthase GlgA -
HV319_RS24890 () 9336..11783 + 2448 WP_094169334.1 glycogen phosphorylase -
HV319_RS24895 () 11888..13531 + 1644 WP_032743938.1 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) -
HV319_RS24900 () 13625..14521 - 897 Protein_10 IS3 family transposase ISEhe3 Transposase
HV319_RS24905 () 14531..15682 - 1152 WP_048242354.1 IS30 family transposase IS30H Transposase
HV319_RS24910 () 15747..15995 - 249 Protein_12 IS3 family transposase ISEhe3 Transposase
HV319_RS24915 () 16133..16702 + 570 WP_040190629.1 helix-turn-helix transcriptional regulator -
HV319_RS24920 () 16786..17859 - 1074 WP_075262229.1 oligosaccharide MFS transporter -
HV319_RS24925 () 18161..19165 - 1005 WP_117273198.1 IS110 family transposase IS4321R Transposase
HV319_RS24930 () 19244..22216 - 2973 WP_001138073.1 Tn3 family transposase TnpA_TnAs3 Transposase
HV319_RS24935 () 22219..22776 - 558 WP_001162012.1 Tn3 family transposase TnpR_TnAs2 Transposase
HV319_RS24940 () 22906..23118 - 213 WP_000993245.1 DUF3330 domain-containing protein -
HV319_RS24945 () 23184..23420 - 237 WP_001087807.1 broad-spectrum mercury transporter MerE -
HV319_RS24950 () 23417..23782 - 366 WP_001277466.1 mercury resistance co-regulator MerD -
HV319_RS24955 () 23800..25485 - 1686 WP_000209296.1 mercury(II) reductase -
HV319_RS24960 () 25524..25949 - 426 WP_000522996.1 organomercurial transporter MerC -
HV319_RS24965 () 25977..26252 - 276 WP_000732275.1 mercury resistance system periplasmic binding protein MerP -
HV319_RS24970 () 26268..26663 - 396 WP_001294653.1 mercuric ion transporter MerT -
HV319_RS24975 () 26735..27190 + 456 WP_001166628.1 IS607 family transposase ISChh1 Transposase
HV319_RS24980 () 27239..27814 + 576 WP_045270086.1 lipid IV(A) palmitoyltransferase PagP -
HV319_RS24985 () 27822..28745 - 924 WP_024196075.1 acyltransferase -
HV319_RS24990 () 28938..31994 - 3057 WP_181502631.1 efflux RND transporter permease subunit -
HV319_RS24995 () 31994..33079 - 1086 WP_016241530.1 efflux RND transporter periplasmic adaptor subunit -
HV319_RS25000 () 33604..34035 + 432 WP_016241528.1 universal stress protein -
HV319_RS25005 () 34086..36773 + 2688 WP_016241527.1 cation-transporting P-type ATPase -
HV319_RS25010 () 36941..37129 - 189 Protein_32 hypothetical protein -
HV319_RS25015 () 37163..37768 - 606 WP_000509966.1 Tn3 family transposase TnpR_Tn5403 Transposase
HV319_RS25020 () 37863..40760 + 2898 WP_023307208.1 Tn3 family transposase TnpA_Tn5403 Transposase
HV319_RS25025 () 40794..40976 + 183 Protein_35 MerR family transcriptional regulator -
HV319_RS25030 () 41800..43275 + 1476 WP_020324153.1 SEC-C domain-containing protein -
HV319_RS25035 () 44368..44778 - 411 Protein_37 Tn3 family transposase TnpR_ISPa38 Transposase
HV319_RS25040 () 44832..45536 - 705 WP_047389788.1 IS6 family transposase IS26 Transposase
HV319_RS25045 () 45595..45846 + 252 WP_001515736.1 hypothetical protein -
HV319_RS25050 () 45960..47105 + 1146 WP_001325018.1 ABC transporter permease -
HV319_RS25055 () 47111..47902 + 792 WP_001325019.1 putative ribonucleotide transport ATP-binding protein mkl VF
HV319_RS25060 () 47904..48842 + 939 WP_000449980.1 MCE family protein -
HV319_RS25065 () 48842..49483 + 642 WP_000948259.1 membrane integrity-associated transporter subunit PqiC -
HV319_RS25070 () 49831..51108 + 1278 WP_001515737.1 serine dehydratase subunit alpha family protein -
HV319_RS25075 () 51190..51708 + 519 Protein_45 PLP-dependent transferase -
HV319_RS25080 () 51765..52462 + 698 Protein_46 IS1 family transposase IS1R Transposase
HV319_RS25085 () 52786..53154 + 369 WP_032242306.1 hypothetical protein -
HV319_RS25090 () 53389..54630 + 1242 Protein_48 Tn3 family transposase TnpA_TnEc1 Transposase
HV319_RS25095 () 54627..55649 + 1023 WP_000156887.1 IS110 family transposase IS1618 Transposase
HV319_RS25100 () 55940..56056 + 117 Protein_50 IS110 family transposase -
HV319_RS25105 () 56517..57206 + 690 WP_044351480.1 DUF4145 domain-containing protein -
HV319_RS25110 () 57345..58313 - 969 WP_077254959.1 IS5 family transposase IS903B Transposase
HV319_RS25115 () 58387..58836 - 450 WP_032420996.1 hypothetical protein -
HV319_RS25120 () 59173..60795 + 1623 WP_064154212.1 hypothetical protein -
HV319_RS25125 () 61088..61720 + 633 WP_001567369.1 hypothetical protein -
HV319_RS25130 () 61749..63152 - 1404 WP_001567368.1 ISNCY family transposase ISKpn21 Transposase
HV319_RS25135 () 63448..63915 + 468 WP_177339880.1 hypothetical protein -
HV319_RS25145 () 65207..65902 - 696 WP_032736820.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
HV319_RS25150 () 65917..66123 - 207 WP_032736819.1 hypothetical protein -
HV319_RS25155 () 66780..67784 - 1005 WP_117273198.1 IS110 family transposase IS4321R Transposase
HV319_RS25160 () 67958..68557 - 600 WP_032736817.1 GNAT family N-acetyltransferase -
HV319_RS25165 () 68823..69827 + 1005 WP_117273198.1 IS110 family transposase IS4321R Transposase
HV319_RS25170 () 70173..71013 + 841 Protein_64 EAL domain-containing protein -
HV319_RS25175 () 72166..73110 - 945 WP_181502633.1 sensor domain-containing diguanylate cyclase -
HV319_RS25180 () 73812..74228 - 417 WP_181502632.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
HV319_RS25185 () 74225..74455 - 231 WP_059362947.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
HV319_RS25190 () 75009..75359 + 351 WP_009654828.1 hypothetical protein -
HV319_RS25195 () 75399..76166 + 768 WP_009654830.1 hypothetical protein -
HV319_RS25200 () 76169..76945 + 777 WP_032426116.1 site-specific integrase -
HV319_RS25205 () 77090..78079 - 990 WP_020804955.1 Recombination-promoting nuclease RpnA VF
HV319_RS25210 () 79291..79911 + 621 WP_032743918.1 ParA family protein -
HV319_RS25215 () 79961..80191 + 231 WP_032743917.1 DNA partition complex ParG -
HV319_RS25220 () 80633..80986 + 354 WP_001114073.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
HV319_RS25225 () 81034..81396 + 363 WP_000783215.1 arsenite efflux transporter metallochaperone ArsD -
HV319_RS25230 () 81414..83165 + 1752 WP_001556710.1 arsenite efflux transporter ATPase subunit ArsA -
HV319_RS25235 () 83214..84503 + 1290 WP_000922630.1 arsenite efflux transporter membrane subunit ArsB -
HV319_RS25240 () 84516..84941 + 426 WP_000065758.1 glutaredoxin-dependent arsenate reductase -
HV319_RS25245 () 84972..85376 - 405 WP_004118313.1 arsenic transporter ATPase -
HV319_RS25250 () 85385..85957 - 573 WP_001556711.1 Tn3 family transposase TnpR_Tn3 Transposase
HV319_RS25255 () 86121..89129 + 3009 WP_136374471.1 Tn3 family transposase ISEc63 Transposase
HV319_RS25260 () 89291..89830 - 540 WP_004099036.1 Peptide methionine sulfoxide reductase MsrA 3 VF
HV319_RS25265 () 89832..90275 - 444 WP_004099035.1 Peptide methionine sulfoxide reductase MsrB VF
HV319_RS25270 () 90400..91431 + 1032 WP_032425611.1 IS630 family transposase ISEc33 Transposase
HV319_RS25275 () 91577..92452 - 876 WP_011191349.1 LysR family transcriptional regulator -
HV319_RS25280 () 92681..93913 + 1233 WP_004357650.1 bifunctional alpha/beta hydrolase/OsmC family protein -
HV319_RS25285 () 93916..94509 + 594 WP_025760400.1 Peptide methionine sulfoxide reductase MsrA VF
HV319_RS25290 () 94512..95534 + 1023 WP_004099029.1 Zinc-type alcohol dehydrogenase-like protein VF
HV319_RS25295 () 95931..96425 - 495 WP_004099028.1 MarR family winged helix-turn-helix transcriptional regulator -
HV319_RS25300 () 96742..96924 - 183 WP_004357657.1 hypothetical protein -
HV319_RS25305 () 96983..97471 - 489 WP_004099027.1 DUF417 family protein -
HV319_RS25310 () 97742..98128 + 387 WP_004099026.1 hypothetical protein -
HV319_RS25315 () 98167..99126 - 960 WP_004099025.1 YeeE/YedE family protein -
HV319_RS25320 () 99153..99686 - 534 WP_004357616.1 MarR family transcriptional regulator -
HV319_RS25325 () 99943..100839 + 897 WP_011191354.1 LysR family transcriptional regulator -
HV319_RS25330 () 100836..101072 - 237 WP_026227538.1 DUF2274 domain-containing protein -
HV319_RS25335 () 101075..102295 - 1221 WP_011191355.1 Type IV secretion system protein virB10 VF
HV319_RS25340 () 102292..103341 - 1050 WP_011191356.1 P-type conjugative transfer protein TrbG -
HV319_RS25345 () 103338..103658 - 321 Protein_99 conjugal transfer protein TrbF -
HV319_RS25350 () 103936..104682 - 747 Protein_100 IS110 family transposase IS4321 Transposase
HV319_RS25355 () 104734..105438 - 705 WP_047389788.1 IS6 family transposase IS26 Transposase
HV319_RS25360 () 105501..105737 - 237 Protein_102 IS6 family transposase IS15 Transposase
HV319_RS25365 () 106343..107353 + 1011 WP_011191343.1 Zinc-type alcohol dehydrogenase-like protein VF
HV319_RS25370 () 107427..107858 + 432 WP_004357630.1 heme-binding protein -
HV319_RS25375 () 107921..108211 + 291 WP_011191344.1 DUF1330 domain-containing protein -
HV319_RS25380 () 108363..108833 + 471 WP_011191345.1 hypothetical protein -
HV319_RS25385 () 108837..109349 + 513 WP_004357637.1 DM13 domain-containing protein -
HV319_RS25390 () 109337..110608 + 1272 WP_004357638.1 MFS transporter -
HV319_RS25395 () 110639..111040 - 402 WP_004099044.1 hypothetical protein -
HV319_RS25400 () 111147..111596 - 450 WP_004099042.1 hypothetical protein -
HV319_RS25405 () 111684..112256 - 573 WP_004099040.1 hypothetical protein -
HV319_RS25410 () 112348..113316 - 969 WP_032640602.1 magnesium and cobalt transport protein CorA -
HV319_RS25415 () 113353..113910 - 558 WP_003100847.1 Tn3 family transposase TnpR_ISPa38 Transposase
HV319_RS25420 () 113904..114275 - 372 WP_003100853.1 hypothetical protein -
HV319_RS25425 () 114272..114772 - 501 WP_003100856.1 hypothetical protein -
HV319_RS25430 () 114769..115095 - 327 WP_003100858.1 hypothetical protein -
HV319_RS25435 () 115350..115706 - 357 WP_000215515.1 cupin domain-containing protein -
HV319_RS25440 () 115696..116097 - 402 WP_001293886.1 DUF86 domain-containing protein -
HV319_RS25445 () 116094..116384 - 291 WP_001247892.1 nucleotidyltransferase -
HV319_RS25450 () 116543..119317 + 2775 Protein_120 Tn3 family transposase TnpA_ISPa38 Transposase
HV319_RS25455 () 119383..120087 + 705 WP_047389788.1 IS6 family transposase IS26 Transposase
HV319_RS25460 () 120263..120763 - 501 WP_001752509.1 non-heme ferritin-like protein -
HV319_RS25465 () 120899..121603 - 705 WP_047389788.1 IS6 family transposase IS26 Transposase
HV319_RS25470 () 121670..122898 + 1229 WP_148116659.1 IS3 family transposase ISEc27 Transposase
HV319_RS25475 () 123204..123713 - 510 Protein_125 IS5 family transposase ISKpn26 Transposase
HV319_RS25480 () 123784..124871 + 1088 WP_088569307.1 IS3 family transposase ISKpn20 Transposase
HV319_RS25485 () 124909..125385 - 477 Protein_127 IS5 family transposase ISKpn26 Transposase
HV319_RS25490 () 125663..125944 - 282 WP_000780222.1 helix-turn-helix transcriptional regulator -
HV319_RS25495 () 125925..126254 - 330 WP_000493286.1 type II toxin-antitoxin system RelE/ParE family toxin -
HV319_RS25500 () 126673..127626 - 954 WP_181541868.1 IS110 family transposase IS4321R Transposase
HV319_RS25505 () 127823..128218 - 396 Protein_131 cytochrome C -
HV319_RS25510 () 128247..128957 - 711 WP_022652302.1 Lipoprotein-releasing system ATP-binding protein LolD VF
HV319_RS25515 () 128959..130164 - 1206 WP_022652303.1 ABC transporter permease -
HV319_RS25520 () 130161..131312 - 1152 WP_022652304.1 efflux RND transporter periplasmic adaptor subunit -
HV319_RS25525 () 131309..131917 - 609 WP_004393990.1 TetR/AcrR family transcriptional regulator -
HV319_RS25530 () 132105..133058 + 954 WP_022652300.1 IS110 family transposase IS4321R Transposase
HV319_RS25535 () 133649..134158 + 510 WP_050483874.1 sigma-70 family RNA polymerase sigma factor -
HV319_RS25540 () 134315..135316 + 1002 WP_094169444.1 permease -
HV319_RS25545 () 135330..135560 + 231 WP_021314637.1 thioredoxin family protein -
HV319_RS25550 () 135838..136041 - 204 WP_021314636.1 hypothetical protein -
HV319_RS25555 () 136123..136950 - 828 WP_032430841.1 universal stress protein -
HV319_RS25560 () 136968..138446 - 1479 WP_022652309.1 SulP family inorganic anion transporter -
HV319_RS25565 () 138953..139975 + 1023 WP_000156887.1 IS110 family transposase IS1618 Transposase
HV319_RS25570 () 140267..140574 - 308 Protein_144 IS1 family transposase -
HV319_RS25575 () 141051..141791 + 741 WP_022652310.1 site-specific integrase -
HV319_RS25580 () 142117..143106 - 990 WP_022652311.1 RepB family plasmid replication initiator protein -
HV319_RS25585 () 143962..144231 + 270 WP_022652312.1 DUF1778 domain-containing protein Antitoxin Detail
HV319_RS25590 () 144235..144765 + 531 WP_022652313.1 GNAT family N-acetyltransferase Toxin Detail
HV319_RS25595 () 144897..145790 + 894 WP_161348953.1 IS5 family transposase IS5D Transposase
HV319_RS25600 () 145931..146407 - 477 Protein_150 IS3 family transposase ISEhe3 Transposase
HV319_RS25605 () 146488..147996 - 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
HV319_RS25610 () 148669..149098 - 430 Protein_152 IS3 family transposase -
HV319_RS25615 () 149162..150313 + 1152 WP_022652315.1 IS30 family transposase IS30D Transposase
HV319_RS25620 () 150346..151686 - 1341 WP_008786676.1 IS110 family transposase ISWpi13 Transposase
HV319_RS25625 () 151917..152159 - 243 Protein_155 IS3 family transposase ISEhe3 Transposase
HV319_RS25630 () 152530..153696 + 1167 WP_022652317.1 plasmid-partitioning protein SopA -
HV319_RS25635 () 153696..154661 + 966 WP_094169339.1 ParB/RepB/Spo0J family plasmid partition protein -
HV319_RS25640 () 155394..156436 - 1043 Protein_158 translesion error-prone DNA polymerase V subunit UmuC -
HV319_RS25645 () 156690..158828 + 2139 WP_022652236.1 hypothetical protein -
HV319_RS25650 () 159162..160565 + 1404 WP_072200700.1 DNA cytosine methyltransferase -
HV319_RS25655 () 160599..161813 - 1215 WP_176443283.1 type II site-specific deoxyribonuclease -
HV319_RS25660 () 161962..164087 - 2126 Protein_162 tyrosine-type recombinase/integrase -
HV319_RS25665 () 164071..165075 - 1005 Protein_163 tyrosine-type recombinase/integrase -
HV319_RS25670 () 165149..165376 - 228 Protein_164 DNA polymerase V subunit UmuC -
HV319_RS25675 () 165355..165798 - 444 WP_181502630.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
HV319_RS25680 () 165978..166649 - 672 WP_022652243.1 SOS response-associated peptidase family protein -
HV319_RS25685 () 167009..167686 + 678 WP_022652244.1 DNA methylase -
HV319_RS25690 () 167686..167907 + 222 WP_022652245.1 hypothetical protein -
HV319_RS25695 () 167918..168337 + 420 WP_094169336.1 DUF1380 domain-containing protein -
HV319_RS25700 () 168391..169170 + 780 WP_032430832.1 hypothetical protein -
HV319_RS25705 () 169577..170083 + 507 WP_015062672.1 antirestriction protein ArdA -
HV319_RS25710 () 170126..170317 + 192 WP_022652248.1 hypothetical protein -
HV319_RS25715 () 170509..170763 + 255 WP_072200699.1 DNA polymerase III subunit theta -
HV319_RS25720 () 170798..171115 + 318 WP_032430831.1 hypothetical protein -
HV319_RS25725 () 171238..171459 - 222 WP_015062665.1 hypothetical protein -
HV319_RS25730 () 171790..172344 + 555 WP_020842505.1 single-stranded DNA-binding protein -
HV319_RS25735 () 172397..172639 + 243 WP_032430848.1 DUF905 domain-containing protein -
HV319_RS25740 () 172710..174743 + 2034 Protein_178 ParB/RepB/Spo0J family partition protein -
HV319_RS25745 () 174784..175218 + 435 WP_086538015.1 conjugation system SOS inhibitor PsiB -
HV319_RS25750 () 175215..175943 + 729 WP_032430829.1 plasmid SOS inhibition protein A -
HV319_RS25755 () 175940..176293 + 354 WP_020833567.1 hypothetical protein -
HV319_RS25760 () 176647..177021 + 375 WP_020833566.1 hypothetical protein -
HV319_RS25765 () 177747..178151 + 405 WP_032430828.1 hypothetical protein -
HV319_RS25770 () 178208..178555 + 348 WP_032430827.1 hypothetical protein -
HV319_RS25775 () 178650..178796 + 147 WP_001159045.1 hypothetical protein -
HV319_RS25780 () 178843..179676 + 834 WP_032430826.1 type I restriction-modification system subunit M -
HV319_RS25785 () 180323..180853 + 531 WP_032430825.1 antirestriction protein -
HV319_RS25790 () 180864..181319 - 456 WP_032430824.1 hypothetical protein VF
HV319_RS25795 () 181788..182171 + 384 WP_015062650.1 relaxosome protein TraM -
HV319_RS25800 () 182468..182917 + 450 WP_020833561.1 helix-turn-helix domain-containing protein -
HV319_RS25805 () 183123..183356 + 234 WP_032430823.1 TraY domain-containing protein -
HV319_RS25810 () 183474..183833 + 360 WP_032430822.1 type IV conjugative transfer system pilin TraA -
HV319_RS25815 () 183835..184140 + 306 WP_000398849.1 type IV conjugative transfer system protein TraL -
HV319_RS25820 () 184160..184723 + 564 WP_032430821.1 type IV conjugative transfer system protein TraE -
HV319_RS25825 () 184713..185453 + 741 WP_032430820.1 type-F conjugative transfer system secretin TraK -
HV319_RS25830 () 185440..186801 + 1362 WP_032430819.1 F-type conjugal transfer pilus assembly protein TraB -
HV319_RS25835 () 186911..187130 + 220 Protein_197 TraR/DksA C4-type zinc finger protein -
HV319_RS25840 () 187143..187595 + 453 WP_032430818.1 hypothetical protein -
HV319_RS25845 () 187613..188212 + 600 WP_047715683.1 type IV conjugative transfer system lipoprotein TraV -
HV319_RS25850 () 188223..190814 + 2592 WP_032430816.1 type IV secretion system protein TraC -
HV319_RS25855 () 190811..191275 + 465 WP_032430815.1 type-F conjugative transfer system protein TrbI -
HV319_RS25860 () 191275..191910 + 636 WP_032430814.1 type-F conjugative transfer system protein TraW -
HV319_RS25865 () 191907..192902 + 996 WP_032430813.1 conjugal transfer pilus assembly protein TraU -
HV319_RS25870 () 192913..193281 + 369 WP_032430812.1 hypothetical protein -
HV319_RS25875 () 193278..193892 + 615 WP_032430811.1 type-F conjugative transfer system pilin assembly protein TrbC -
HV319_RS25880 () 193889..195742 + 1854 WP_032430810.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
HV319_RS25885 () 195739..196518 + 780 WP_071446640.1 type-F conjugative transfer system pilin assembly protein TraF -
HV319_RS25890 () 196539..198206 + 1668 Protein_208 type IV conjugative transfer system coupling protein TraD -
HV319_RS25895 () 198206..203509 + 5304 WP_047715673.1 Multifunctional conjugation protein TraI Relaxase
HV319_RS25900 () 203528..204094 + 567 WP_047715672.1 DUF2726 domain-containing protein -
HV319_RS25905 () 204091..204822 + 732 WP_071446724.1 type-F conjugative transfer system pilin acetylase TraX -
HV319_RS25910 () 204864..205217 + 354 WP_047715670.1 hypothetical protein -
HV319_RS25915 () 205366..205929 + 564 WP_047715669.1 Phospholipase D VF
HV319_RS25920 () 206061..206303 + 243 WP_000078032.1 replication regulatory protein RepA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance