NZ_CP0562391..206642

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 206642 bp
Accession: NZ_CP056239        Location: 1..206642         Organism: Citrobacter freundii strain RHBSTW-00935       Replicon: plasmid pRHBSTW-00935_2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HV330_RS24835 () 1..942 + 942 WP_165690017.1 replication initiator protein RepA -
HV330_RS24840 () 2302..2760 - 459 WP_040190671.1 helix-turn-helix transcriptional regulator -
HV330_RS24845 () 2822..3058 + 237 WP_032695943.1 tautomerase family protein -
HV330_RS24850 () 3294..3437 + 144 Protein_4 transposase -
HV330_RS24855 () 4189..6381 + 2193 WP_094169335.1 1,4-alpha-glucan branching enzyme -
HV330_RS24860 () 6511..7794 + 1284 WP_032690514.1 glucose-1-phosphate adenylyltransferase -
HV330_RS24865 () 7884..9317 + 1434 WP_040190721.1 glycogen synthase GlgA -
HV330_RS24870 () 9336..11783 + 2448 WP_094169334.1 glycogen phosphorylase -
HV330_RS24875 () 11888..13531 + 1644 WP_032743938.1 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) -
HV330_RS24880 () 13625..14521 - 897 Protein_10 IS3 family transposase ISEhe3 Transposase
HV330_RS24885 () 14531..15682 - 1152 WP_048242354.1 IS30 family transposase IS30H Transposase
HV330_RS24890 () 15747..15995 - 249 Protein_12 IS3 family transposase ISEhe3 Transposase
HV330_RS24895 () 16133..16702 + 570 WP_040190629.1 helix-turn-helix transcriptional regulator -
HV330_RS24900 () 16786..17859 - 1074 WP_075262229.1 oligosaccharide MFS transporter -
HV330_RS24905 () 18161..19165 - 1005 WP_117273198.1 IS110 family transposase IS4321R Transposase
HV330_RS24910 () 19244..22216 - 2973 WP_001138073.1 Tn3 family transposase TnpA_TnAs3 Transposase
HV330_RS24915 () 22219..22776 - 558 WP_001162012.1 Tn3 family transposase TnpR_TnAs2 Transposase
HV330_RS24920 () 22906..23118 - 213 WP_000993245.1 DUF3330 domain-containing protein -
HV330_RS24925 () 23184..23420 - 237 WP_001087807.1 broad-spectrum mercury transporter MerE -
HV330_RS24930 () 23417..23782 - 366 WP_001277466.1 mercury resistance co-regulator MerD -
HV330_RS24935 () 23800..25485 - 1686 WP_000209296.1 mercury(II) reductase -
HV330_RS24940 () 25524..25949 - 426 WP_000522996.1 organomercurial transporter MerC -
HV330_RS24945 () 25977..26252 - 276 WP_000732275.1 mercury resistance system periplasmic binding protein MerP -
HV330_RS24950 () 26268..26663 - 396 WP_001294653.1 mercuric ion transporter MerT -
HV330_RS24955 () 26735..27190 + 456 WP_001166628.1 IS607 family transposase ISChh1 Transposase
HV330_RS24960 () 27239..27814 + 576 WP_045270086.1 lipid IV(A) palmitoyltransferase PagP -
HV330_RS24965 () 27822..28745 - 924 WP_024196075.1 acyltransferase -
HV330_RS24970 () 28938..31994 - 3057 WP_181502631.1 efflux RND transporter permease subunit -
HV330_RS24975 () 31994..33079 - 1086 WP_016241530.1 efflux RND transporter periplasmic adaptor subunit -
HV330_RS24980 () 33604..34035 + 432 WP_016241528.1 universal stress protein -
HV330_RS24985 () 34086..36773 + 2688 WP_016241527.1 cation-transporting P-type ATPase -
HV330_RS24990 () 36941..37129 - 189 Protein_32 hypothetical protein -
HV330_RS24995 () 37163..37768 - 606 WP_000509966.1 Tn3 family transposase TnpR_Tn5403 Transposase
HV330_RS25000 () 37863..40760 + 2898 WP_023307208.1 Tn3 family transposase TnpA_Tn5403 Transposase
HV330_RS25005 () 40794..40976 + 183 Protein_35 MerR family transcriptional regulator -
HV330_RS25010 () 41837..43312 + 1476 WP_020324153.1 SEC-C domain-containing protein -
HV330_RS25015 () 44405..44815 - 411 Protein_37 Tn3 family transposase TnpR_ISPa38 Transposase
HV330_RS25020 () 44869..45573 - 705 WP_047389788.1 IS6 family transposase IS26 Transposase
HV330_RS25025 () 45632..45883 + 252 WP_001515736.1 hypothetical protein -
HV330_RS25030 () 45997..47142 + 1146 WP_001325018.1 ABC transporter permease -
HV330_RS25035 () 47148..47939 + 792 WP_001325019.1 putative ribonucleotide transport ATP-binding protein mkl VF
HV330_RS25040 () 47941..48879 + 939 WP_000449980.1 MCE family protein -
HV330_RS25045 () 48879..49520 + 642 WP_000948259.1 membrane integrity-associated transporter subunit PqiC -
HV330_RS25050 () 49868..51145 + 1278 WP_001515737.1 serine dehydratase subunit alpha family protein -
HV330_RS25055 () 51227..51745 + 519 Protein_45 PLP-dependent transferase -
HV330_RS25060 () 51802..52499 + 698 Protein_46 IS1 family transposase IS1X2 Transposase
HV330_RS25065 () 52823..53191 + 369 WP_032242306.1 hypothetical protein -
HV330_RS25070 () 53426..54667 + 1242 Protein_48 Tn3 family transposase TnpA_TnEc1 Transposase
HV330_RS25075 () 54664..55686 + 1023 WP_000156887.1 IS110 family transposase IS1618 Transposase
HV330_RS25080 () 55977..56093 + 117 Protein_50 IS110 family transposase -
HV330_RS25085 () 56554..57243 + 690 WP_044351480.1 DUF4145 domain-containing protein -
HV330_RS25090 () 57382..58350 - 969 WP_077254959.1 IS5 family transposase IS903B Transposase
HV330_RS25095 () 58424..58873 - 450 WP_032420996.1 hypothetical protein -
HV330_RS25100 () 59210..60832 + 1623 WP_064154212.1 hypothetical protein -
HV330_RS25105 () 61125..61757 + 633 WP_001567369.1 hypothetical protein -
HV330_RS25110 () 61786..63189 - 1404 WP_001567368.1 ISNCY family transposase ISKpn21 Transposase
HV330_RS25115 () 63485..63952 + 468 WP_177339880.1 hypothetical protein -
HV330_RS25125 () 65244..65939 - 696 WP_032736820.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
HV330_RS25130 () 65954..66160 - 207 WP_032736819.1 hypothetical protein -
HV330_RS25135 () 66817..67821 - 1005 WP_117273198.1 IS110 family transposase IS4321R Transposase
HV330_RS25140 () 67995..68594 - 600 WP_032736817.1 GNAT family N-acetyltransferase -
HV330_RS25145 () 68860..69864 + 1005 WP_117273198.1 IS110 family transposase IS4321R Transposase
HV330_RS25150 () 70210..71050 + 841 Protein_64 EAL domain-containing protein -
HV330_RS25155 () 72203..73147 - 945 WP_181502633.1 sensor domain-containing diguanylate cyclase -
HV330_RS25160 () 73849..74265 - 417 WP_181502632.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
HV330_RS25165 () 74262..74492 - 231 WP_059362947.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
HV330_RS25170 () 75046..75396 + 351 WP_009654828.1 hypothetical protein -
HV330_RS25175 () 75436..76203 + 768 WP_009654830.1 hypothetical protein -
HV330_RS25180 () 76206..76982 + 777 WP_032426116.1 site-specific integrase -
HV330_RS25185 () 77127..78116 - 990 WP_020804955.1 Recombination-promoting nuclease RpnA VF
HV330_RS25190 () 79328..79948 + 621 WP_032743918.1 ParA family protein -
HV330_RS25195 () 79998..80228 + 231 WP_032743917.1 DNA partition complex ParG -
HV330_RS25200 () 80670..81023 + 354 WP_001114073.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
HV330_RS25205 () 81071..81433 + 363 WP_000783215.1 arsenite efflux transporter metallochaperone ArsD -
HV330_RS25210 () 81451..83202 + 1752 WP_001556710.1 arsenite efflux transporter ATPase subunit ArsA -
HV330_RS25215 () 83251..84540 + 1290 WP_000922630.1 arsenite efflux transporter membrane subunit ArsB -
HV330_RS25220 () 84553..84978 + 426 WP_000065758.1 glutaredoxin-dependent arsenate reductase -
HV330_RS25225 () 85009..85413 - 405 WP_004118313.1 arsenic transporter ATPase -
HV330_RS25230 () 85422..85994 - 573 WP_001556711.1 Tn3 family transposase TnpR_Tn3 Transposase
HV330_RS25235 () 86158..89166 + 3009 WP_136374471.1 Tn3 family transposase ISEc63 Transposase
HV330_RS25240 () 89328..89867 - 540 WP_004099036.1 Peptide methionine sulfoxide reductase MsrA 3 VF
HV330_RS25245 () 89869..90312 - 444 WP_004099035.1 Peptide methionine sulfoxide reductase MsrB VF
HV330_RS25250 () 90437..91468 + 1032 WP_032425611.1 IS630 family transposase ISEc33 Transposase
HV330_RS25255 () 91614..92489 - 876 WP_011191349.1 LysR family transcriptional regulator -
HV330_RS25260 () 92718..93950 + 1233 WP_004357650.1 bifunctional alpha/beta hydrolase/OsmC family protein -
HV330_RS25265 () 93953..94546 + 594 WP_025760400.1 Peptide methionine sulfoxide reductase MsrA VF
HV330_RS25270 () 94549..95571 + 1023 WP_004099029.1 Zinc-type alcohol dehydrogenase-like protein VF
HV330_RS25275 () 95968..96462 - 495 WP_004099028.1 MarR family winged helix-turn-helix transcriptional regulator -
HV330_RS25280 () 96779..96961 - 183 WP_004357657.1 hypothetical protein -
HV330_RS25285 () 97020..97508 - 489 WP_004099027.1 DUF417 family protein -
HV330_RS25290 () 97779..98165 + 387 WP_004099026.1 hypothetical protein -
HV330_RS25295 () 98204..99163 - 960 WP_004099025.1 YeeE/YedE family protein -
HV330_RS25300 () 99190..99723 - 534 WP_004357616.1 MarR family transcriptional regulator -
HV330_RS25305 () 99980..100876 + 897 WP_011191354.1 LysR family transcriptional regulator -
HV330_RS25310 () 100873..101109 - 237 WP_026227538.1 DUF2274 domain-containing protein -
HV330_RS25315 () 101112..102332 - 1221 WP_011191355.1 Type IV secretion system protein virB10 VF
HV330_RS25320 () 102329..103378 - 1050 WP_011191356.1 P-type conjugative transfer protein TrbG -
HV330_RS25325 () 103375..103695 - 321 Protein_99 conjugal transfer protein TrbF -
HV330_RS25330 () 103973..104719 - 747 Protein_100 IS110 family transposase IS4321 Transposase
HV330_RS25335 () 104771..105475 - 705 WP_047389788.1 IS6 family transposase IS26 Transposase
HV330_RS25340 () 105538..105774 - 237 Protein_102 IS6 family transposase IS15 Transposase
HV330_RS25345 () 106380..107390 + 1011 WP_011191343.1 Zinc-type alcohol dehydrogenase-like protein VF
HV330_RS25350 () 107464..107895 + 432 WP_004357630.1 heme-binding protein -
HV330_RS25355 () 107958..108248 + 291 WP_011191344.1 DUF1330 domain-containing protein -
HV330_RS25360 () 108400..108870 + 471 WP_011191345.1 hypothetical protein -
HV330_RS25365 () 108874..109386 + 513 WP_004357637.1 DM13 domain-containing protein -
HV330_RS25370 () 109374..110645 + 1272 WP_004357638.1 MFS transporter -
HV330_RS25375 () 110676..111077 - 402 WP_004099044.1 hypothetical protein -
HV330_RS25380 () 111184..111633 - 450 WP_004099042.1 hypothetical protein -
HV330_RS25385 () 111721..112293 - 573 WP_004099040.1 hypothetical protein -
HV330_RS25390 () 112385..113353 - 969 WP_032640602.1 magnesium and cobalt transport protein CorA -
HV330_RS25395 () 113390..113947 - 558 WP_003100847.1 Tn3 family transposase TnpR_ISPa38 Transposase
HV330_RS25400 () 113941..114312 - 372 WP_003100853.1 hypothetical protein -
HV330_RS25405 () 114309..114809 - 501 WP_003100856.1 hypothetical protein -
HV330_RS25410 () 114806..115132 - 327 WP_003100858.1 hypothetical protein -
HV330_RS25415 () 115387..115743 - 357 WP_000215515.1 cupin domain-containing protein -
HV330_RS25420 () 115733..116134 - 402 WP_001293886.1 DUF86 domain-containing protein -
HV330_RS25425 () 116131..116421 - 291 WP_001247892.1 nucleotidyltransferase -
HV330_RS25430 () 116580..119354 + 2775 Protein_120 Tn3 family transposase TnpA_ISPa38 Transposase
HV330_RS25435 () 119420..120124 + 705 WP_047389788.1 IS6 family transposase IS26 Transposase
HV330_RS25440 () 120300..120800 - 501 WP_001752509.1 non-heme ferritin-like protein -
HV330_RS25445 () 120936..121640 - 705 WP_047389788.1 IS6 family transposase IS26 Transposase
HV330_RS25450 () 121707..122935 + 1229 WP_148116659.1 IS3 family transposase ISEc27 Transposase
HV330_RS25455 () 123241..123750 - 510 Protein_125 IS5 family transposase ISKpn26 Transposase
HV330_RS25460 () 123821..124908 + 1088 WP_088569307.1 IS3 family transposase ISKpn20 Transposase
HV330_RS25465 () 124946..125422 - 477 Protein_127 IS5 family transposase ISKpn26 Transposase
HV330_RS25470 () 125700..125981 - 282 WP_000780222.1 helix-turn-helix transcriptional regulator -
HV330_RS25475 () 125962..126291 - 330 WP_000493286.1 type II toxin-antitoxin system RelE/ParE family toxin -
HV330_RS25480 () 126710..127663 - 954 WP_022652300.1 IS110 family transposase IS4321R Transposase
HV330_RS25485 () 127860..128255 - 396 Protein_131 cytochrome C -
HV330_RS25490 () 128284..128994 - 711 WP_022652302.1 Lipoprotein-releasing system ATP-binding protein LolD VF
HV330_RS25495 () 128996..130201 - 1206 WP_022652303.1 ABC transporter permease -
HV330_RS25500 () 130198..131349 - 1152 WP_022652304.1 efflux RND transporter periplasmic adaptor subunit -
HV330_RS25505 () 131346..131954 - 609 WP_004393990.1 TetR/AcrR family transcriptional regulator -
HV330_RS25510 () 132142..133095 + 954 WP_022652300.1 IS110 family transposase IS4321R Transposase
HV330_RS25515 () 133686..134195 + 510 WP_050483874.1 sigma-70 family RNA polymerase sigma factor -
HV330_RS25520 () 134352..135353 + 1002 WP_094169444.1 permease -
HV330_RS25525 () 135367..135597 + 231 WP_021314637.1 thioredoxin family protein -
HV330_RS25530 () 135875..136078 - 204 WP_021314636.1 hypothetical protein -
HV330_RS25535 () 136160..136987 - 828 WP_032430841.1 universal stress protein -
HV330_RS25540 () 137005..138483 - 1479 WP_022652309.1 SulP family inorganic anion transporter -
HV330_RS25545 () 138990..140012 + 1023 WP_000156887.1 IS110 family transposase IS1618 Transposase
HV330_RS25550 () 140304..140611 - 308 Protein_144 IS1 family transposase -
HV330_RS25555 () 141088..141828 + 741 WP_022652310.1 site-specific integrase -
HV330_RS25560 () 142154..143143 - 990 WP_022652311.1 RepB family plasmid replication initiator protein -
HV330_RS25565 () 143999..144268 + 270 WP_022652312.1 DUF1778 domain-containing protein Antitoxin Detail
HV330_RS25570 () 144272..144802 + 531 WP_022652313.1 GNAT family N-acetyltransferase Toxin Detail
HV330_RS25575 () 144934..145827 + 894 WP_161348953.1 IS5 family transposase IS5D Transposase
HV330_RS25580 () 145968..146444 - 477 Protein_150 IS3 family transposase ISEhe3 Transposase
HV330_RS25585 () 146525..148033 - 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
HV330_RS25590 () 148706..149135 - 430 Protein_152 IS3 family transposase -
HV330_RS25595 () 149199..150350 + 1152 WP_022652315.1 IS30 family transposase IS30D Transposase
HV330_RS25600 () 150383..151723 - 1341 WP_008786676.1 IS110 family transposase ISWpi13 Transposase
HV330_RS25605 () 151954..152196 - 243 Protein_155 IS3 family transposase ISEhe3 Transposase
HV330_RS25610 () 152567..153733 + 1167 WP_022652317.1 plasmid-partitioning protein SopA -
HV330_RS25615 () 153733..154698 + 966 WP_094169339.1 ParB/RepB/Spo0J family plasmid partition protein -
HV330_RS25620 () 155431..156473 - 1043 Protein_158 translesion error-prone DNA polymerase V subunit UmuC -
HV330_RS25625 () 156727..158865 + 2139 WP_022652236.1 hypothetical protein -
HV330_RS25630 () 159199..160602 + 1404 WP_072200700.1 DNA cytosine methyltransferase -
HV330_RS25635 () 160636..161850 - 1215 WP_176443283.1 type II site-specific deoxyribonuclease -
HV330_RS25640 () 161999..164124 - 2126 Protein_162 tyrosine-type recombinase/integrase -
HV330_RS25645 () 164108..165112 - 1005 Protein_163 tyrosine-type recombinase/integrase -
HV330_RS25650 () 165186..165413 - 228 Protein_164 DNA polymerase V subunit UmuC -
HV330_RS25655 () 165392..165835 - 444 WP_181502630.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
HV330_RS25660 () 166015..166686 - 672 WP_022652243.1 SOS response-associated peptidase family protein -
HV330_RS25665 () 167046..167723 + 678 WP_022652244.1 DNA methylase -
HV330_RS25670 () 167723..167944 + 222 WP_022652245.1 hypothetical protein -
HV330_RS25675 () 167955..168374 + 420 WP_094169336.1 DUF1380 domain-containing protein -
HV330_RS25680 () 168428..169207 + 780 WP_032430832.1 hypothetical protein -
HV330_RS25685 () 169614..170120 + 507 WP_015062672.1 antirestriction protein ArdA -
HV330_RS25690 () 170163..170354 + 192 WP_022652248.1 hypothetical protein -
HV330_RS25695 () 170546..170800 + 255 WP_072200699.1 DNA polymerase III subunit theta -
HV330_RS25700 () 170835..171152 + 318 WP_032430831.1 hypothetical protein -
HV330_RS25705 () 171275..171496 - 222 WP_015062665.1 hypothetical protein -
HV330_RS25710 () 171827..172381 + 555 WP_020842505.1 single-stranded DNA-binding protein -
HV330_RS25715 () 172434..172676 + 243 WP_032430848.1 DUF905 domain-containing protein -
HV330_RS25720 () 172747..174780 + 2034 Protein_178 ParB/RepB/Spo0J family partition protein -
HV330_RS25725 () 174821..175255 + 435 WP_086538015.1 conjugation system SOS inhibitor PsiB -
HV330_RS25730 () 175252..175980 + 729 WP_032430829.1 plasmid SOS inhibition protein A -
HV330_RS25735 () 175977..176330 + 354 WP_020833567.1 hypothetical protein -
HV330_RS25740 () 176684..177058 + 375 WP_020833566.1 hypothetical protein -
HV330_RS25745 () 177784..178188 + 405 WP_032430828.1 hypothetical protein -
HV330_RS25750 () 178245..178592 + 348 WP_032430827.1 hypothetical protein -
HV330_RS25755 () 178687..178833 + 147 WP_001159045.1 hypothetical protein -
HV330_RS25760 () 178880..179713 + 834 WP_032430826.1 type I restriction-modification system subunit M -
HV330_RS25765 () 180360..180890 + 531 WP_032430825.1 antirestriction protein -
HV330_RS25770 () 180901..181356 - 456 WP_032430824.1 hypothetical protein VF
HV330_RS25775 () 181825..182208 + 384 WP_015062650.1 relaxosome protein TraM -
HV330_RS25780 () 182505..182954 + 450 WP_020833561.1 helix-turn-helix domain-containing protein -
HV330_RS25785 () 183160..183393 + 234 WP_032430823.1 TraY domain-containing protein -
HV330_RS25790 () 183511..183870 + 360 WP_032430822.1 type IV conjugative transfer system pilin TraA -
HV330_RS25795 () 183872..184177 + 306 WP_000398849.1 type IV conjugative transfer system protein TraL -
HV330_RS25800 () 184197..184760 + 564 WP_032430821.1 type IV conjugative transfer system protein TraE -
HV330_RS25805 () 184750..185490 + 741 WP_032430820.1 type-F conjugative transfer system secretin TraK -
HV330_RS25810 () 185477..186838 + 1362 WP_032430819.1 F-type conjugal transfer pilus assembly protein TraB -
HV330_RS25815 () 186948..187167 + 220 Protein_197 TraR/DksA C4-type zinc finger protein -
HV330_RS25820 () 187180..187632 + 453 WP_032430818.1 hypothetical protein -
HV330_RS25825 () 187650..188249 + 600 WP_047715683.1 type IV conjugative transfer system lipoprotein TraV -
HV330_RS25830 () 188260..190851 + 2592 WP_032430816.1 type IV secretion system protein TraC -
HV330_RS25835 () 190848..191312 + 465 WP_032430815.1 type-F conjugative transfer system protein TrbI -
HV330_RS25840 () 191312..191947 + 636 WP_032430814.1 type-F conjugative transfer system protein TraW -
HV330_RS25845 () 191944..192939 + 996 WP_032430813.1 conjugal transfer pilus assembly protein TraU -
HV330_RS25850 () 192950..193318 + 369 WP_032430812.1 hypothetical protein -
HV330_RS25855 () 193315..193929 + 615 WP_032430811.1 type-F conjugative transfer system pilin assembly protein TrbC -
HV330_RS25860 () 193926..195779 + 1854 WP_032430810.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
HV330_RS25865 () 195776..196555 + 780 WP_071446640.1 type-F conjugative transfer system pilin assembly protein TraF -
HV330_RS25870 () 196576..198243 + 1668 Protein_208 type IV conjugative transfer system coupling protein TraD -
HV330_RS25875 () 198243..203546 + 5304 WP_047715673.1 Multifunctional conjugation protein TraI Relaxase
HV330_RS25880 () 203565..204131 + 567 WP_047715672.1 DUF2726 domain-containing protein -
HV330_RS25885 () 204128..204859 + 732 WP_071446724.1 type-F conjugative transfer system pilin acetylase TraX -
HV330_RS25890 () 204901..205254 + 354 WP_047715670.1 hypothetical protein -
HV330_RS25895 () 205403..205966 + 564 WP_047715669.1 Phospholipase D VF
HV330_RS25900 () 206098..206340 + 243 WP_000078032.1 replication regulatory protein RepA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance