MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 87925 bp
Accession: NZ_CP056166 Location: 1..87925 Organism: Escherichia marmotae strain RHBSTW-00777 Replicon: plasmid pRHBSTW-00777_2
Accession: NZ_CP056166 Location: 1..87925 Organism: Escherichia marmotae strain RHBSTW-00777 Replicon: plasmid pRHBSTW-00777_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV276_RS23040 () | 1..858 | + | 858 | WP_181503376.1 | incFII family plasmid replication initiator RepA | - |
| HV276_RS23045 () | 1830..2141 | + | 312 | WP_181503398.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HV276_RS23050 () | 2141..2428 | + | 288 | WP_024195838.1 | helix-turn-helix transcriptional regulator | - |
| HV276_RS23055 () | 2533..2769 | + | 237 | Protein_4 | IS66 family insertion sequence element accessory protein TnpB | - |
| HV276_RS23060 () | 2751..2873 | + | 123 | Protein_5 | IS66 family insertion sequence element accessory protein TnpB | - |
| HV276_RS23065 () | 2893..4134 | + | 1242 | Protein_6 | IS66 family transposase ISCro1 | Transposase |
| HV276_RS23070 () | 4254..5165 | - | 912 | WP_181503377.1 | hypothetical protein | - |
| HV276_RS23075 () | 5153..6103 | - | 951 | WP_181503378.1 | hypothetical protein | VF |
| HV276_RS23080 () | 6605..6949 | - | 345 | WP_181503379.1 | hypothetical protein | - |
| HV276_RS23085 () | 7255..7839 | - | 585 | WP_181503380.1 | hypothetical protein | - |
| HV276_RS23090 () | 7880..8089 | - | 210 | WP_181503381.1 | hypothetical protein | - |
| HV276_RS23095 () | 8196..9086 | - | 891 | WP_181503382.1 | hypothetical protein | - |
| HV276_RS23100 () | 9497..10438 | - | 942 | WP_181503383.1 | hypothetical protein | - |
| HV276_RS23105 () | 10681..10976 | - | 296 | Protein_14 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| HV276_RS23110 () | 11008..11655 | - | 648 | WP_181503384.1 | DsbA family protein | - |
| HV276_RS23115 () | 11877..12419 | - | 543 | WP_181479320.1 | F18 fimbrial protein FedE | - |
| HV276_RS23120 () | 12382..13074 | - | 693 | WP_001558361.1 | Chaperone protein FaeE | VF |
| HV276_RS23125 () | 13067..15481 | - | 2415 | WP_181503385.1 | putative outer membrane usher protein ElfC | VF |
| HV276_RS23130 () | 15579..16112 | - | 534 | WP_181503395.1 | hypothetical protein | VF |
| HV276_RS23135 () | 16492..16815 | - | 324 | WP_181503396.1 | transcriptional regulator | - |
| HV276_RS23140 () | 17303..17485 | + | 183 | WP_181479317.1 | dolichol monophosphate mannose synthase | - |
| HV276_RS23145 () | 17531..17872 | - | 342 | WP_064717828.1 | PerC family transcriptional regulator | - |
| HV276_RS23150 () | 18321..21044 | + | 2724 | WP_181503397.1 | Outer membrane protein IcsA autotransporter | VF |
| HV276_RS23155 () | 21425..22060 | + | 636 | WP_001012683.1 | hypothetical protein | - |
| HV276_RS23160 () | 22251..24308 | - | 2058 | WP_181479331.1 | prolyl oligopeptidase family serine peptidase | - |
| HV276_RS23165 () | 25395..25697 | + | 303 | WP_000263658.1 | hypothetical protein | - |
| HV276_RS23170 () | 25843..26856 | - | 1014 | WP_000109844.1 | sulfite reductase subunit C | - |
| HV276_RS23175 () | 26867..27685 | - | 819 | WP_001542543.1 | anaerobic sulfite reductase subunit AsrB | - |
| HV276_RS23180 () | 27689..28732 | - | 1044 | WP_181503386.1 | anaerobic sulfite reductase subunit AsrA | - |
| HV276_RS23185 () | 29289..29798 | + | 510 | WP_001145797.1 | uracil-DNA glycosylase | - |
| HV276_RS23190 () | 29995..30417 | - | 423 | WP_000639547.1 | universal stress protein | - |
| HV276_RS23195 () | 31114..32151 | - | 1038 | WP_181503387.1 | nucleotidyltransferase | - |
| HV276_RS23200 () | 32832..33146 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| HV276_RS23205 () | 33199..33978 | + | 780 | WP_181503388.1 | hypothetical protein | - |
| HV276_RS23210 () | 34029..34808 | + | 780 | WP_181503389.1 | site-specific integrase | - |
| HV276_RS23215 () | 34946..35221 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| HV276_RS23220 () | 35215..35859 | - | 645 | WP_000633913.1 | AAA family ATPase | - |
| HV276_RS23225 () | 36088..37059 | + | 972 | WP_001103690.1 | hypothetical protein | - |
| HV276_RS23230 () | 37064..37456 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| HV276_RS23235 () | 37461..38732 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| HV276_RS23240 () | 38732..39169 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HV276_RS23245 () | 39166..39414 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HV276_RS23250 () | 39832..40734 | + | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
| HV276_RS23255 () | 40731..41042 | + | 312 | WP_181503390.1 | hypothetical protein | - |
| HV276_RS23260 () | 41119..41802 | + | 684 | WP_181503391.1 | DNA methylase | - |
| HV276_RS23265 () | 41803..42024 | + | 222 | WP_181503392.1 | hypothetical protein | - |
| HV276_RS23270 () | 42036..42470 | + | 435 | WP_181503393.1 | DUF1380 family protein | - |
| HV276_RS23275 () | 42515..43285 | + | 771 | WP_181503394.1 | hypothetical protein | - |
| HV276_RS23280 () | 43821..44123 | + | 303 | WP_077695322.1 | antirestriction protein | - |
| HV276_RS23285 () | 44170..44589 | + | 420 | WP_181503365.1 | DUF1380 family protein | - |
| HV276_RS23290 () | 45595..45825 | + | 231 | WP_105288677.1 | hypothetical protein | - |
| HV276_RS23295 () | 45877..47238 | + | 1362 | WP_181503366.1 | DUF3560 domain-containing protein | - |
| HV276_RS23300 () | 47285..47848 | + | 564 | WP_181503367.1 | class I SAM-dependent methyltransferase | - |
| HV276_RS23305 () | 48653..48949 | + | 297 | WP_089644687.1 | hypothetical protein | - |
| HV276_RS23310 () | 49055..49876 | + | 822 | WP_181503368.1 | DUF945 domain-containing protein | - |
| HV276_RS23315 () | 50155..50607 | - | 453 | WP_024212709.1 | hypothetical protein | VF |
| HV276_RS23320 () | 51085..51468 | + | 384 | WP_001137956.1 | hypothetical protein | - |
| HV276_RS23325 () | 51650..52387 | + | 738 | WP_000818288.1 | hypothetical protein | - |
| HV276_RS23330 () | 52476..52685 | + | 210 | WP_001114348.1 | TraY domain-containing protein | - |
| HV276_RS23335 () | 52987..53358 | + | 372 | WP_000829553.1 | hypothetical protein | - |
| HV276_RS23340 () | 53388..53687 | + | 300 | WP_115443067.1 | type IV conjugative transfer system protein TraL | - |
| HV276_RS23345 () | 53698..54276 | + | 579 | WP_033549278.1 | type IV conjugative transfer system protein TraE | - |
| HV276_RS23350 () | 54251..55030 | + | 780 | WP_021555358.1 | type-F conjugative transfer system secretin TraK | - |
| HV276_RS23355 () | 55023..56357 | + | 1335 | WP_021555357.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| HV276_RS23360 () | 56369..56881 | + | 513 | WP_001558300.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HV276_RS23365 () | 56878..59517 | + | 2640 | WP_115443070.1 | type IV secretion system protein TraC | - |
| HV276_RS23370 () | 59496..59912 | + | 417 | WP_001558298.1 | type-F conjugative transfer system protein TrbI | - |
| HV276_RS23375 () | 59915..60139 | + | 225 | WP_000752802.1 | TraR/DksA C4-type zinc finger protein | - |
| HV276_RS23380 () | 60136..60753 | + | 618 | WP_089581124.1 | type-F conjugative transfer system protein TraW | - |
| HV276_RS23385 () | 60750..61145 | + | 396 | WP_001078242.1 | hypothetical protein | - |
| HV276_RS23390 () | 61142..62140 | + | 999 | WP_001558295.1 | conjugal transfer pilus assembly protein TraU | - |
| HV276_RS23395 () | 62196..62579 | + | 384 | WP_038808898.1 | hypothetical protein | - |
| HV276_RS23400 () | 62612..63091 | + | 480 | WP_106426290.1 | protein TraP | - |
| HV276_RS23405 () | 63494..64066 | + | 573 | WP_032140653.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HV276_RS23410 () | 64063..65997 | + | 1935 | WP_001558288.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HV276_RS23415 () | 65999..66784 | + | 786 | WP_000833559.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HV276_RS23420 () | 66802..67074 | + | 273 | WP_033549292.1 | hypothetical protein | - |
| HV276_RS23425 () | 67076..67663 | + | 588 | WP_181503369.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HV276_RS23430 () | 67716..69122 | + | 1407 | WP_181479342.1 | conjugal transfer protein TraH | - |
| HV276_RS23435 () | 69122..71974 | + | 2853 | WP_181503370.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HV276_RS23440 () | 71988..72638 | + | 651 | WP_181479340.1 | hypothetical protein | - |
| HV276_RS23445 () | 72710..73447 | + | 738 | WP_000927748.1 | complement resistance protein TraT | - |
| HV276_RS23450 () | 73709..74107 | - | 399 | WP_000911307.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HV276_RS23455 () | 74107..74334 | - | 228 | WP_000450523.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HV276_RS23460 () | 74467..76653 | + | 2187 | WP_181503371.1 | type IV conjugative transfer system coupling protein TraD | - |
| HV276_RS23465 () | 76660..81876 | + | 5217 | WP_181503372.1 | Multifunctional conjugation protein TraI | Relaxase |
| HV276_RS23470 () | 81876..82097 | + | 222 | WP_000412081.1 | hypothetical protein | - |
| HV276_RS23475 () | 82105..82854 | + | 750 | WP_181503373.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| HV276_RS23480 () | 82928..83488 | + | 561 | WP_000139377.1 | fertility inhibition protein FinO | - |
| HV276_RS23485 () | 83642..83836 | - | 195 | WP_181503374.1 | hypothetical protein | - |
| HV276_RS23490 () | 84205..84804 | + | 600 | WP_181503375.1 | hypothetical protein | - |
| HV276_RS23495 () | 84973..85203 | + | 231 | WP_001736714.1 | hypothetical protein | - |
| - () | 85747..85805 | - | 59 | NuclAT_0 | - | Antitoxin Detail |
| - () | 85747..85805 | - | 59 | NuclAT_0 | - | Antitoxin Detail |
| - () | 85747..85805 | - | 59 | NuclAT_0 | - | Antitoxin Detail |
| - () | 85747..85805 | - | 59 | NuclAT_0 | - | Antitoxin Detail |
| HV276_RS23500 () | 85852..86001 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HV276_RS23505 () | 86316..86606 | + | 291 | WP_001558271.1 | DUF1778 domain-containing protein | - |
| HV276_RS23510 () | 86597..87079 | + | 483 | WP_000405249.1 | GNAT family N-acetyltransferase | - |
| HV276_RS23515 () | 87364..87624 | + | 261 | WP_000078108.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|