MGE detailed information
MGE type: Conjugative plasmid MGE length: 134406 bp
Accession: NZ_CP056079 Location: 1..134406 Organism: Escherichia coli strain MS1170 Replicon: plasmid pMS1170_2
Accession: NZ_CP056079 Location: 1..134406 Organism: Escherichia coli strain MS1170 Replicon: plasmid pMS1170_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HED12_RS23150 () | 1510..1650 | + | 141 | WP_012512742.1 | hypothetical protein | - |
| HED12_RS23155 () | 1723..1992 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HED12_RS23160 () | 1989..2270 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HED12_RS23165 () | 2316..3164 | + | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| HED12_RS23170 () | 3350..5230 | + | 1881 | WP_001610315.1 | colicin 1A | - |
| HED12_RS23175 () | 5252..5587 | - | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| HED12_RS23180 () | 5716..5973 | + | 258 | WP_000142431.1 | hypothetical protein | - |
| HED12_RS23185 () | 5993..6583 | - | 591 | WP_001350923.1 | hypothetical protein | - |
| HED12_RS23190 () | 6580..6840 | - | 261 | WP_000343091.1 | hypothetical protein | - |
| HED12_RS23195 () | 7133..7585 | + | 453 | WP_000670963.1 | N-acetyltransferase | - |
| HED12_RS23200 () | 7641..7907 | - | 267 | WP_001610313.1 | FAD-dependent oxidoreductase | - |
| HED12_RS23205 () | 7904..8173 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| HED12_RS23210 () | 8175..8952 | - | 778 | Protein_13 | Gfo/Idh/MocA family oxidoreductase | - |
| HED12_RS23215 () | 9113..9349 | + | 237 | WP_001323890.1 | colicin V immunity protein | - |
| HED12_RS23220 () | 9327..9638 | + | 312 | WP_001259758.1 | colicin V | - |
| HED12_RS23225 () | 9808..11922 | - | 2115 | WP_202791759.1 | peptidase domain-containing ABC transporter | - |
| HED12_RS23230 () | 11897..13171 | - | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| HED12_RS23235 () | 13853..14050 | + | 198 | WP_001324224.1 | toxin-antitoxin system protein | Antitoxin Detail |
| HED12_RS23240 () | 14047..14229 | + | 183 | WP_000969988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HED12_RS23245 () | 14328..14636 | + | 309 | WP_000377483.1 | hypothetical protein | - |
| HED12_RS23250 () | 15196..16230 | + | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| HED12_RS23255 () | 17085..19262 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| HED12_RS23260 () | 19307..20263 | - | 957 | WP_001610312.1 | Ferri-bacillibactin esterase BesA | VF |
| HED12_RS23265 () | 20348..21577 | - | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| HED12_RS23270 () | 21681..25340 | - | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| HED12_RS23275 () | 25480..26595 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| HED12_RS23280 () | 27831..28930 | - | 1100 | Protein_27 | IS481 family transposase ISKpn28 | Transposase |
| HED12_RS23285 () | 29568..31106 | - | 1539 | WP_032219885.1 | IS66 family transposase ISEc8 | Transposase |
| HED12_RS23290 () | 31156..31503 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| HED12_RS23295 () | 31500..31880 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| HED12_RS23300 () | 31989..32133 | + | 145 | Protein_31 | Rz1 family lipoprotein | - |
| HED12_RS23305 () | 32191..32484 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| HED12_RS23310 () | 33109..34337 | + | 1229 | WP_103758541.1 | IS3 family transposase IS2 | Transposase |
| HED12_RS23315 () | 35579..36772 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
| HED12_RS23320 () | 36950..37099 | + | 150 | Protein_35 | IS3 family transposase | - |
| HED12_RS23325 () | 37370..38773 | + | 1404 | WP_096248357.1 | ISNCY family transposase ISKpn21 | Transposase |
| HED12_RS23330 () | 38804..39721 | - | 918 | WP_001610307.1 | hypothetical protein | - |
| HED12_RS23335 () | 39725..40723 | - | 999 | WP_001610306.1 | hypothetical protein | - |
| HED12_RS23340 () | 40984..42381 | + | 1398 | WP_001610305.1 | ISNCY family transposase ISKpn21 | Transposase |
| HED12_RS23345 () | 42613..42882 | + | 270 | WP_001610304.1 | hypothetical protein | - |
| HED12_RS23350 () | 42882..43349 | + | 468 | WP_001610303.1 | hypothetical protein | - |
| HED12_RS23355 () | 43392..43763 | + | 372 | WP_001610302.1 | hypothetical protein | - |
| HED12_RS23360 () | 43999..45344 | + | 1346 | Protein_43 | ISNCY family transposase ISLad2 | Transposase |
| HED12_RS23365 () | 45750..45854 | - | 105 | Protein_44 | IS3 family transposase IS1351 | Transposase |
| HED12_RS23370 () | 46105..48369 | - | 2265 | WP_001610298.1 | UvrD-helicase domain-containing protein | - |
| HED12_RS23375 () | 48371..49147 | - | 777 | WP_001610297.1 | hypothetical protein | - |
| HED12_RS23380 () | 49899..51212 | - | 1314 | Protein_47 | IS4 family transposase | - |
| HED12_RS23385 () | 51543..52913 | - | 1371 | WP_001696614.1 | efflux transporter outer membrane subunit | - |
| HED12_RS23390 () | 52917..54857 | - | 1941 | WP_001610286.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| HED12_RS23395 () | 54854..56041 | - | 1188 | WP_001696612.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HED12_RS23400 () | 57756..58172 | + | 417 | WP_001595315.1 | IS3 family transposase IS1351 | Transposase |
| HED12_RS23405 () | 59446..60399 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| HED12_RS23410 () | 60831..61940 | + | 1110 | WP_001696610.1 | SDR family oxidoreductase | - |
| HED12_RS23415 () | 62009..62911 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| HED12_RS23420 () | 63285..63473 | + | 189 | WP_001312821.1 | hypothetical protein | - |
| HED12_RS23425 () | 63594..64334 | + | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| HED12_RS23430 () | 64619..65596 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| HED12_RS23435 () | 66340..66663 | + | 324 | Protein_58 | IS21 family transposase IS21 | Transposase |
| HED12_RS23440 () | 66665..66769 | + | 105 | Protein_59 | AAA family ATPase | - |
| HED12_RS23445 () | 66830..67343 | + | 514 | Protein_60 | DUF4113 domain-containing protein | - |
| HED12_RS23450 () | 67523..68220 | - | 698 | Protein_61 | IS1 family transposase IS1S | Transposase |
| HED12_RS23455 () | 68577..69491 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| HED12_RS23460 () | 69491..70318 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| HED12_RS23465 () | 70315..71172 | + | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| HED12_RS23470 () | 71169..72026 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| HED12_RS23475 () | 72260..72517 | - | 258 | Protein_66 | Tn3 family transposase | - |
| HED12_RS23480 () | 72515..72928 | + | 414 | Protein_67 | phosphopyruvate hydratase | - |
| HED12_RS23485 () | 73269..73427 | + | 159 | Protein_68 | fluoride efflux transporter CrcB | - |
| HED12_RS23490 () | 73482..74179 | + | 698 | Protein_69 | IS1 family transposase IS1S | Transposase |
| HED12_RS23495 () | 74408..75910 | + | 1503 | WP_001610277.1 | hypothetical protein | - |
| HED12_RS23500 () | 76245..76942 | + | 698 | Protein_71 | IS1 family transposase IS1S | Transposase |
| HED12_RS23505 () | 77242..78408 | + | 1167 | WP_202791757.1 | Sporulation initiation inhibitor protein Soj | VF |
| HED12_RS23510 () | 78408..79379 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HED12_RS23515 () | 80578..80916 | + | 339 | WP_001513511.1 | hypothetical protein | - |
| HED12_RS23520 () | 80985..81560 | + | 576 | WP_000343071.1 | hypothetical protein | - |
| HED12_RS23525 () | 81573..81785 | + | 213 | WP_000092896.1 | hypothetical protein | - |
| HED12_RS23530 () | 82046..83017 | - | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| HED12_RS23535 () | 83542..83844 | + | 303 | WP_072256028.1 | antirestriction protein | - |
| HED12_RS23540 () | 83844..84305 | + | 462 | WP_042007484.1 | DUF1380 family protein | - |
| HED12_RS23545 () | 84305..84487 | + | 183 | WP_001027505.1 | hypothetical protein | - |
| HED12_RS23550 () | 84475..84803 | - | 329 | Protein_81 | pilus assembly protein | - |
| HED12_RS23555 () | 85481..85711 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| HED12_RS23560 () | 85763..87124 | + | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| HED12_RS23565 () | 87170..87733 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| HED12_RS23570 () | 87885..88151 | + | 267 | WP_072254135.1 | hypothetical protein | - |
| HED12_RS23575 () | 88621..89148 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| HED12_RS23580 () | 89204..89437 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| HED12_RS23585 () | 89496..91454 | + | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| HED12_RS23590 () | 91509..91943 | + | 435 | WP_137433372.1 | conjugation system SOS inhibitor PsiB | - |
| HED12_RS23595 () | 91940..92659 | + | 720 | WP_001610270.1 | plasmid SOS inhibition protein A | - |
| HED12_RS23600 () | 92671..92859 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 92671..92895 | + | 225 | NuclAT_0 | - | - |
| - () | 92671..92895 | + | 225 | NuclAT_0 | - | - |
| - () | 92671..92895 | + | 225 | NuclAT_0 | - | - |
| - () | 92671..92895 | + | 225 | NuclAT_0 | - | - |
| - () | 92828..92893 | + | 66 | - | - | Antitoxin Detail |
| HED12_RS23605 () | 92939..93097 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HED12_RS23610 () | 93788..93994 | + | 207 | WP_000547939.1 | hypothetical protein | - |
| HED12_RS23615 () | 94019..94306 | + | 288 | WP_000107537.1 | hypothetical protein | - |
| HED12_RS23620 () | 94426..95247 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| HED12_RS23625 () | 95544..96146 | - | 603 | WP_000243709.1 | hypothetical protein | VF |
| HED12_RS23630 () | 96467..96850 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| HED12_RS23635 () | 97037..97726 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| HED12_RS23640 () | 97825..98220 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| HED12_RS23645 () | 98253..98618 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| HED12_RS23650 () | 98633..98944 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HED12_RS23655 () | 98966..99532 | + | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| HED12_RS23660 () | 99543..100247 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HED12_RS23665 () | 100247..101674 | + | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| HED12_RS23670 () | 101664..102254 | + | 591 | WP_000002792.1 | conjugal transfer protein TraP | - |
| HED12_RS23675 () | 102208..102438 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| HED12_RS23680 () | 102450..102701 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| HED12_RS23685 () | 102698..103213 | + | 516 | WP_000809840.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HED12_RS23690 () | 103348..103569 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| HED12_RS23695 () | 103729..106356 | + | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| HED12_RS23700 () | 106353..106739 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| HED12_RS23705 () | 106736..107368 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| HED12_RS23710 () | 107365..108357 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| HED12_RS23715 () | 108366..109004 | + | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HED12_RS23720 () | 109001..110809 | + | 1809 | WP_001610323.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HED12_RS23725 () | 110836..111084 | + | 249 | WP_021553208.1 | conjugal transfer protein TrbE | - |
| HED12_RS23730 () | 111086..111829 | + | 744 | WP_001030389.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HED12_RS23735 () | 111845..112192 | + | 348 | WP_001287676.1 | conjugal transfer protein TrbA | - |
| HED12_RS23740 () | 112311..112595 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HED12_RS23745 () | 112582..113127 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HED12_RS23750 () | 113057..113419 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| HED12_RS23755 () | 113419..114792 | + | 1374 | WP_170974982.1 | conjugal transfer protein TraH | - |
| HED12_RS23760 () | 114789..117611 | + | 2823 | WP_001610322.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HED12_RS23765 () | 117627..118112 | + | 486 | WP_000605866.1 | hypothetical protein | - |
| HED12_RS23770 () | 118161..118892 | + | 732 | WP_000782454.1 | complement resistance protein TraT | - |
| HED12_RS23775 () | 119145..121307 | + | 2163 | WP_052944470.1 | type IV conjugative transfer system coupling protein TraD | - |
| HED12_RS23780 () | 121307..126577 | + | 5271 | WP_202791758.1 | Multifunctional conjugation protein TraI | Relaxase |
| HED12_RS23785 () | 126597..127343 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| HED12_RS23790 () | 127402..128262 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| HED12_RS23795 () | 128365..128925 | + | 561 | WP_001610319.1 | fertility inhibition protein FinO | - |
| HED12_RS23800 () | 129057..129308 | + | 252 | WP_001372275.1 | hypothetical protein | - |
| HED12_RS23805 () | 129596..131167 | - | 1572 | WP_097293269.1 | IS66 family transposase ISCro1 | Transposase |
| HED12_RS23810 () | 131187..131534 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| HED12_RS23815 () | 131534..132184 | - | 651 | WP_089558189.1 | IS66 family transposase IS679 | Transposase |
| HED12_RS23820 () | 132280..132681 | + | 402 | WP_202791760.1 | thermonuclease family protein | - |
| HED12_RS23825 () | 132727..132936 | + | 210 | WP_001610317.1 | hemolysin expression modulator Hha | - |
| HED12_RS23830 () | 132974..133564 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| HED12_RS23835 () | 133803..134063 | + | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| HED12_RS23840 () | 134289..134363 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|