MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122881 bp
Accession: NZ_CP056037 Location: 1..122881 Organism: Escherichia coli strain EC31 Replicon: plasmid pEC31-1
Accession: NZ_CP056037 Location: 1..122881 Organism: Escherichia coli strain EC31 Replicon: plasmid pEC31-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUW39_RS25015 (HUW39_25015) | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| HUW39_RS25020 (HUW39_25020) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| HUW39_RS25025 (HUW39_25025) | 2124..2312 | - | 189 | WP_033559363.1 | hypothetical protein | - |
| HUW39_RS25030 (HUW39_25030) | 2687..3589 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| HUW39_RS25035 (HUW39_25035) | 3658..4767 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| HUW39_RS25040 (HUW39_25040) | 5200..6153 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| HUW39_RS25045 (HUW39_25045) | 7405..7945 | - | 541 | Protein_6 | IS3 family transposase IS1351 | Transposase |
| HUW39_RS25050 (HUW39_25050) | 9556..10743 | + | 1188 | WP_001696612.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HUW39_RS25055 (HUW39_25055) | 10740..12680 | + | 1941 | WP_001610286.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| HUW39_RS25060 (HUW39_25060) | 12684..14054 | + | 1371 | WP_073056898.1 | efflux transporter outer membrane subunit | - |
| HUW39_RS25065 (HUW39_25065) | 14385..15698 | + | 1314 | Protein_10 | IS4 family transposase | - |
| HUW39_RS25070 (HUW39_25070) | 16440..17228 | + | 789 | WP_251385176.1 | hypothetical protein | - |
| HUW39_RS25075 (HUW39_25075) | 17230..19494 | + | 2265 | WP_021539375.1 | UvrD-helicase domain-containing protein | - |
| HUW39_RS25080 (HUW39_25080) | 19745..19849 | + | 105 | Protein_13 | IS3 family transposase IS1351 | Transposase |
| HUW39_RS25085 (HUW39_25085) | 20255..21600 | - | 1346 | Protein_14 | ISNCY family transposase ISLad2 | Transposase |
| HUW39_RS25090 (HUW39_25090) | 21836..22207 | - | 372 | WP_001610984.1 | hypothetical protein | - |
| HUW39_RS25095 (HUW39_25095) | 22250..22717 | - | 468 | WP_196446566.1 | hypothetical protein | - |
| HUW39_RS25100 (HUW39_25100) | 22717..22986 | - | 270 | WP_001610985.1 | hypothetical protein | - |
| HUW39_RS25105 (HUW39_25105) | 23218..24615 | - | 1398 | Protein_18 | ISNCY family transposase ISKpn21 | Transposase |
| HUW39_RS25110 (HUW39_25110) | 24924..25073 | - | 150 | Protein_19 | IS3 family transposase IS2 | Transposase |
| HUW39_RS25115 (HUW39_25115) | 25251..26444 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| HUW39_RS25120 (HUW39_25120) | 27667..28903 | - | 1237 | Protein_21 | IS3 family transposase IS2 | Transposase |
| HUW39_RS25125 (HUW39_25125) | 29530..29823 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| HUW39_RS25130 (HUW39_25130) | 29907..30055 | - | 149 | Protein_23 | Rz1 family lipoprotein | - |
| HUW39_RS26495 | 30012..30119 | - | 108 | Protein_24 | lysis system i-spanin subunit Rz | - |
| HUW39_RS25135 (HUW39_25135) | 30634..31657 | + | 1024 | Protein_25 | IS481 family transposase ISKpn28 | Transposase |
| HUW39_RS25140 (HUW39_25140) | 32968..34083 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| HUW39_RS25145 (HUW39_25145) | 34223..37882 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| HUW39_RS25150 (HUW39_25150) | 37986..39215 | + | 1230 | WP_001552738.1 | Enterochelin esterase | VF |
| HUW39_RS25155 (HUW39_25155) | 39300..40256 | + | 957 | WP_032072160.1 | Ferri-bacillibactin esterase BesA | VF |
| HUW39_RS25160 (HUW39_25160) | 40301..42478 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| HUW39_RS25170 (HUW39_25170) | 43768..44934 | + | 1167 | WP_212405518.1 | AAA family ATPase | - |
| HUW39_RS25175 (HUW39_25175) | 45129..45323 | + | 195 | Protein_33 | proQ/FINO family protein | - |
| HUW39_RS25180 (HUW39_25180) | 45356..47035 | - | 1680 | Protein_34 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HUW39_RS25185 (HUW39_25185) | 47039..47431 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| HUW39_RS25190 (HUW39_25190) | 47569..48453 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| HUW39_RS25195 (HUW39_25195) | 48485..49684 | - | 1200 | WP_025732387.1 | Tetracycline resistance protein, class C | ARG |
| HUW39_RS25200 (HUW39_25200) | 49790..50440 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HUW39_RS25205 (HUW39_25205) | 50472..50714 | - | 243 | WP_000844627.1 | transposase | - |
| HUW39_RS25210 (HUW39_25210) | 50772..51353 | - | 582 | Protein_40 | Tn3 family transposase | - |
| HUW39_RS25215 (HUW39_25215) | 51434..52138 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HUW39_RS25220 (HUW39_25220) | 52260..53165 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| HUW39_RS25225 (HUW39_25225) | 53162..54400 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| HUW39_RS25230 (HUW39_25230) | 54400..54984 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| HUW39_RS25235 (HUW39_25235) | 55402..56106 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HUW39_RS25240 (HUW39_25240) | 56161..57006 | - | 846 | Protein_46 | IS4 family transposase IS10R | Transposase |
| HUW39_RS25245 (HUW39_25245) | 57116..58078 | - | 963 | Protein_47 | IS4 family transposase IS10R | Transposase |
| HUW39_RS25250 (HUW39_25250) | 58221..59081 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| HUW39_RS25255 (HUW39_25255) | 59094..59636 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| HUW39_RS25260 (HUW39_25260) | 60118..60309 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| HUW39_RS25265 (HUW39_25265) | 60333..60560 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| HUW39_RS25270 (HUW39_25270) | 60611..61738 | + | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| HUW39_RS25275 (HUW39_25275) | 61775..62479 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HUW39_RS25280 (HUW39_25280) | 62533..62970 | - | 438 | Protein_54 | class 1 integron integrase IntI1 | - |
| HUW39_RS25285 (HUW39_25285) | 63128..63601 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| HUW39_RS25290 (HUW39_25290) | 63732..64397 | + | 666 | Protein_56 | Streptomycin 3''-adenylyltransferase | ARG |
| HUW39_RS25295 (HUW39_25295) | 64449..65153 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HUW39_RS25300 (HUW39_25300) | 65217..66413 | - | 1197 | Protein_58 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUW39_RS25305 (HUW39_25305) | 66477..67181 | + | 705 | WP_001067855.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUW39_RS25310 (HUW39_25310) | 67603..68478 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| HUW39_RS25315 (HUW39_25315) | 68525..69001 | - | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| HUW39_RS25320 (HUW39_25320) | 69260..70003 | - | 744 | Protein_62 | Beta-lactamase TEM | ARG |
| HUW39_RS25325 (HUW39_25325) | 70053..70757 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HUW39_RS25330 (HUW39_25330) | 71143..71559 | + | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| HUW39_RS25335 (HUW39_25335) | 71564..72082 | - | 519 | WP_014839979.1 | FidL-like protein | - |
| HUW39_RS25340 (HUW39_25340) | 72082..72870 | - | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| HUW39_RS25345 (HUW39_25345) | 72890..73315 | - | 426 | Protein_67 | TetR/AcrR family transcriptional regulator | - |
| HUW39_RS25350 (HUW39_25350) | 73370..74074 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HUW39_RS25355 (HUW39_25355) | 74346..75026 | + | 681 | Protein_69 | class 1 integron integrase IntI1 | - |
| HUW39_RS25360 (HUW39_25360) | 75091..75795 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HUW39_RS25365 (HUW39_25365) | 75861..76406 | + | 546 | Protein_71 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HUW39_RS25370 (HUW39_25370) | 76442..76857 | - | 416 | Protein_72 | IS1-like element IS1B family transposase | - |
| HUW39_RS25375 (HUW39_25375) | 77106..77507 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HUW39_RS25380 (HUW39_25380) | 77440..77697 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HUW39_RS25385 (HUW39_25385) | 77790..78443 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HUW39_RS25390 (HUW39_25390) | 78541..78681 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| HUW39_RS25395 (HUW39_25395) | 79657..79869 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| HUW39_RS25400 (HUW39_25400) | 80000..80362 | - | 363 | Protein_78 | fertility inhibition protein FinO | - |
| HUW39_RS25405 (HUW39_25405) | 80358..83609 | - | 3252 | Protein_79 | Multifunctional conjugation protein TraI | Relaxase |
| HUW39_RS25410 (HUW39_25410) | 83609..85336 | - | 1728 | WP_134051828.1 | type IV conjugative transfer system coupling protein TraD | - |
| HUW39_RS25415 (HUW39_25415) | 85320..86984 | - | 1665 | Protein_81 | conjugal transfer mating-pair stabilization protein TraG | - |
| HUW39_RS25425 (HUW39_25420) | 87064..87516 | - | 453 | Protein_82 | DNA methyltransferase | - |
| HUW39_RS25430 (HUW39_25425) | 87593..87904 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| HUW39_RS25435 (HUW39_25430) | 87901..88803 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| HUW39_RS25440 (HUW39_25435) | 89670..90641 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HUW39_RS25445 (HUW39_25440) | 90641..91807 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| HUW39_RS25450 (HUW39_25445) | 92395..93150 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HUW39_RS25455 (HUW39_25450) | 93924..94730 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| HUW39_RS25460 (HUW39_25455) | 94731..95036 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HUW39_RS25465 (HUW39_25460) | 95038..95256 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HUW39_RS25470 (HUW39_25465) | 95823..96335 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| HUW39_RS25475 (HUW39_25470) | 96369..97502 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| HUW39_RS25480 (HUW39_25475) | 97669..98442 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| HUW39_RS25485 (HUW39_25480) | 98455..98955 | - | 501 | WP_000528931.1 | HEPN family nuclease | - |
| HUW39_RS25490 (HUW39_25485) | 99220..99450 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HUW39_RS25495 (HUW39_25490) | 99447..99863 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HUW39_RS25500 (HUW39_25495) | 99908..103702 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| HUW39_RS25510 (HUW39_25505) | 105148..107349 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| HUW39_RS25515 (HUW39_25510) | 107375..108708 | - | 1334 | Protein_100 | L-lysine N6-monooxygenase | VF |
| HUW39_RS25520 (HUW39_25515) | 108705..110447 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| HUW39_RS25525 (HUW39_25520) | 110447..111394 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| HUW39_RS25530 (HUW39_25525) | 111395..113119 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| HUW39_RS25535 (HUW39_25530) | 113255..114448 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| HUW39_RS25540 (HUW39_25535) | 114828..115208 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| HUW39_RS25545 (HUW39_25540) | 115549..115962 | - | 414 | Protein_106 | phosphopyruvate hydratase | - |
| HUW39_RS25550 (HUW39_25545) | 115960..116217 | + | 258 | Protein_107 | Tn3 family transposase | - |
| HUW39_RS25555 (HUW39_25550) | 116451..117308 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| HUW39_RS25560 (HUW39_25555) | 117305..118162 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| HUW39_RS25565 (HUW39_25560) | 118159..118986 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| HUW39_RS25570 (HUW39_25565) | 118986..119900 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| HUW39_RS25575 (HUW39_25570) | 120256..120953 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| HUW39_RS25580 (HUW39_25575) | 121133..121646 | - | 514 | Protein_113 | DUF4113 domain-containing protein | - |
| HUW39_RS25585 (HUW39_25580) | 121707..121811 | - | 105 | Protein_114 | AAA family ATPase | - |
| HUW39_RS25590 (HUW39_25585) | 121813..122136 | - | 324 | Protein_115 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|