MGE detailed information
MGE type: Prophage MGE length: 69174 bp
Accession: NZ_CP055302 Location: 1671947..1741120 Organism: Mannheimia pernigra strain 16CN0041 Replicon: chromosome
Accession: NZ_CP055302 Location: 1671947..1741120 Organism: Mannheimia pernigra strain 16CN0041 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV561_RS08555 () | 1667599..1668096 | + | 498 | WP_159629910.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| HV561_RS08560 () | 1668239..1669342 | + | 1104 | WP_176808553.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| HV561_RS08565 () | 1669440..1670525 | + | 1086 | WP_176809031.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| HV561_RS08570 () | 1671072..1671413 | - | 342 | WP_176808554.1 | hypothetical protein | - |
| HV561_RS08575 () | 1671590..1671889 | + | 300 | WP_176809010.1 | helix-turn-helix transcriptional regulator | - |
| HV561_RS08580 () | 1671947..1674001 | - | 2055 | WP_176809032.1 | DUF1983 domain-containing protein | - |
| HV561_RS08585 () | 1674002..1676287 | - | 2286 | Protein_1641 | host specificity protein J | - |
| HV561_RS08590 () | 1676291..1676863 | - | 573 | WP_176809033.1 | tail assembly protein | - |
| HV561_RS08595 () | 1676872..1677603 | - | 732 | WP_176808555.1 | C40 family peptidase | - |
| HV561_RS08600 () | 1677607..1678323 | - | 717 | WP_176808556.1 | phage minor tail protein L | - |
| HV561_RS08605 () | 1678323..1678651 | - | 329 | Protein_1645 | phage tail protein | - |
| HV561_RS08610 () | 1678651..1681953 | - | 3303 | WP_176808557.1 | tape measure protein | - |
| HV561_RS08615 () | 1682017..1682292 | - | 276 | WP_176808558.1 | hypothetical protein | - |
| HV561_RS08620 () | 1682369..1682638 | - | 270 | WP_176808559.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| HV561_RS08625 () | 1682642..1682908 | - | 267 | WP_176808560.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HV561_RS08630 () | 1682972..1683202 | - | 231 | WP_176808561.1 | DUF4035 domain-containing protein | - |
| HV561_RS08635 () | 1683247..1683648 | - | 402 | WP_176808562.1 | hypothetical protein | - |
| HV561_RS08640 () | 1683731..1684372 | - | 642 | WP_176808563.1 | hypothetical protein | - |
| HV561_RS08645 () | 1684404..1684799 | - | 396 | WP_176808564.1 | phage tail protein | - |
| HV561_RS08650 () | 1684796..1685320 | - | 525 | WP_176808565.1 | phage tail protein | - |
| HV561_RS08655 () | 1685327..1685629 | - | 303 | WP_176808566.1 | phage tail protein | - |
| HV561_RS08660 () | 1685622..1685945 | - | 324 | WP_176808567.1 | DUF2190 family protein | - |
| HV561_RS08665 () | 1686013..1688037 | - | 2025 | WP_176808568.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HV561_RS08670 () | 1687973..1689493 | - | 1521 | WP_176808569.1 | phage portal protein | - |
| HV561_RS08675 () | 1689495..1689647 | - | 153 | WP_176808570.1 | hypothetical protein | - |
| HV561_RS08680 () | 1689724..1689948 | - | 225 | WP_176808571.1 | hypothetical protein | - |
| HV561_RS08685 () | 1689945..1692061 | - | 2117 | Protein_1661 | phage terminase large subunit family protein | - |
| HV561_RS08690 () | 1692061..1692537 | - | 477 | WP_176808572.1 | DUF1441 family protein | - |
| HV561_RS08695 () | 1692685..1693083 | - | 399 | WP_176808573.1 | hypothetical protein | - |
| HV561_RS08700 () | 1693220..1693453 | - | 234 | WP_176808574.1 | hypothetical protein | - |
| HV561_RS08705 () | 1693398..1693748 | - | 351 | WP_176808575.1 | DUF2570 domain-containing protein | - |
| HV561_RS08710 () | 1693721..1694260 | - | 540 | WP_176808576.1 | lysozyme | - |
| HV561_RS08715 () | 1694257..1694502 | - | 246 | WP_176808239.1 | hypothetical protein | - |
| HV561_RS08720 () | 1694614..1695189 | + | 576 | WP_176808238.1 | hypothetical protein | - |
| HV561_RS08735 () | 1695476..1695949 | - | 474 | WP_176808577.1 | hypothetical protein | - |
| HV561_RS08740 () | 1695939..1696265 | - | 327 | WP_201723603.1 | RusA family crossover junction endodeoxyribonuclease | - |
| HV561_RS08745 () | 1696304..1696588 | - | 285 | WP_176808578.1 | DUF1364 domain-containing protein | - |
| HV561_RS08750 () | 1696706..1696948 | + | 243 | WP_176808579.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| HV561_RS08755 () | 1696938..1697228 | + | 291 | WP_176808580.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HV561_RS08760 () | 1697562..1698215 | + | 654 | WP_176808581.1 | hypothetical protein | - |
| HV561_RS08765 () | 1698258..1698708 | - | 451 | Protein_1675 | DUF1367 family protein | - |
| HV561_RS08770 () | 1698827..1699405 | - | 579 | WP_176808582.1 | adenine methyltransferase | - |
| HV561_RS08775 () | 1699402..1700247 | - | 846 | WP_176808583.1 | IS21 family transposase IS712 | Transposase |
| HV561_RS11320 () | 1700244..1700990 | - | 747 | WP_202880430.1 | replication protein | - |
| HV561_RS08785 () | 1700987..1701702 | - | 716 | Protein_1679 | Rha family transcriptional regulator | - |
| HV561_RS08790 () | 1701756..1701965 | - | 210 | WP_094945951.1 | helix-turn-helix transcriptional regulator | - |
| HV561_RS08795 () | 1702093..1702764 | + | 672 | WP_176808585.1 | XRE family transcriptional regulator | - |
| HV561_RS11325 () | 1702806..1702964 | + | 159 | WP_202880431.1 | hypothetical protein | - |
| HV561_RS11330 () | 1703456..1703863 | + | 408 | WP_202880432.1 | hypothetical protein | - |
| HV561_RS08805 () | 1703841..1704215 | + | 375 | WP_176808586.1 | ASCH domain-containing protein | - |
| HV561_RS08810 () | 1704350..1704946 | - | 597 | WP_176808587.1 | hypothetical protein | - |
| HV561_RS08815 () | 1705247..1705417 | - | 171 | WP_176808588.1 | DUF1508 domain-containing protein | - |
| HV561_RS08820 () | 1705431..1705652 | + | 222 | WP_176808589.1 | hypothetical protein | - |
| HV561_RS08830 () | 1706370..1706537 | + | 168 | WP_176808590.1 | hypothetical protein | - |
| HV561_RS08835 () | 1706544..1706714 | + | 171 | WP_176808591.1 | hypothetical protein | - |
| HV561_RS08840 () | 1706717..1707640 | + | 924 | WP_176808592.1 | hypothetical protein | - |
| HV561_RS08845 () | 1707649..1708062 | + | 414 | WP_176808226.1 | hypothetical protein | - |
| HV561_RS08850 () | 1708055..1708381 | + | 327 | WP_176808593.1 | hypothetical protein | - |
| HV561_RS08855 () | 1708736..1709047 | + | 312 | Protein_1693 | Bro-N domain-containing protein | - |
| HV561_RS08860 () | 1709299..1710063 | + | 765 | WP_176808594.1 | Serine/threonine-protein kinase PknD | VF |
| HV561_RS08865 () | 1710060..1710773 | + | 714 | WP_176808595.1 | protein phosphatase 2C domain-containing protein | - |
| HV561_RS08870 () | 1711062..1711706 | + | 645 | WP_176808596.1 | KilA-N domain-containing protein | - |
| HV561_RS08875 () | 1711809..1711952 | + | 144 | WP_176807315.1 | hypothetical protein | - |
| HV561_RS08880 () | 1711949..1712314 | + | 366 | WP_176808597.1 | helix-turn-helix domain-containing protein | - |
| HV561_RS08885 () | 1712307..1712447 | + | 141 | WP_176808598.1 | hypothetical protein | - |
| HV561_RS08890 () | 1712447..1712701 | + | 255 | Protein_1700 | hypothetical protein | - |
| HV561_RS08895 () | 1712682..1713182 | + | 501 | WP_176808599.1 | siphovirus Gp157 family protein | - |
| HV561_RS08900 () | 1713194..1713871 | + | 678 | WP_176808600.1 | AAA family ATPase | - |
| HV561_RS08905 () | 1713868..1714542 | + | 675 | WP_176808601.1 | hypothetical protein | - |
| HV561_RS08910 () | 1714582..1714728 | + | 147 | WP_176807317.1 | hypothetical protein | - |
| HV561_RS08915 () | 1714792..1715373 | + | 582 | WP_176808602.1 | hypothetical protein | - |
| HV561_RS08920 () | 1715387..1715806 | + | 420 | WP_176808603.1 | hypothetical protein | - |
| HV561_RS08925 () | 1715906..1717198 | + | 1293 | WP_176808604.1 | hypothetical protein | - |
| HV561_RS08930 () | 1717481..1717705 | + | 225 | WP_176808605.1 | hypothetical protein | - |
| HV561_RS08935 () | 1717871..1718089 | - | 219 | WP_176808606.1 | hypothetical protein | - |
| HV561_RS08940 () | 1718610..1719299 | + | 690 | WP_176808607.1 | phage repressor protein/antirepressor Ant | - |
| HV561_RS08945 () | 1719534..1719755 | + | 222 | WP_176808608.1 | DUF4224 domain-containing protein | - |
| HV561_RS08950 () | 1719879..1720817 | + | 939 | WP_176808609.1 | hypothetical protein ; Integrase | Integrase |
| HV561_RS08955 () | 1720976..1721263 | - | 288 | WP_176808610.1 | 50S ribosomal protein L25 | - |
| HV561_RS08960 () | 1721410..1722327 | - | 918 | WP_176808611.1 | RimK family alpha-L-glutamate ligase | - |
| HV561_RS08965 () | 1722330..1722479 | - | 150 | WP_176808612.1 | hypothetical protein | - |
| HV561_RS08970 () | 1722490..1723263 | - | 774 | WP_176808613.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| HV561_RS08975 () | 1723264..1723572 | - | 309 | WP_176808614.1 | trp operon repressor | - |
| HV561_RS08980 () | 1723661..1724293 | - | 633 | WP_176808615.1 | outer membrane lipoprotein chaperone LolA | - |
| HV561_RS08985 () | 1724411..1727269 | - | 2859 | WP_176808616.1 | DNA polymerase I | - |
| HV561_RS08990 () | 1727387..1728790 | - | 1404 | WP_176808617.1 | YdgA family protein | - |
| HV561_RS08995 () | 1728949..1729761 | - | 813 | WP_176808618.1 | tryptophan synthase subunit alpha | - |
| HV561_RS09000 () | 1729763..1730953 | - | 1191 | WP_176808619.1 | tryptophan synthase subunit beta | - |
| HV561_RS09005 () | 1730981..1731733 | - | 753 | WP_176808620.1 | SDR family oxidoreductase | - |
| HV561_RS09010 () | 1731962..1733500 | - | 1539 | WP_176808621.1 | Na+/H+ antiporter NhaC family protein | - |
| HV561_RS09015 () | 1733916..1734335 | + | 420 | WP_176808622.1 | H-NS histone family protein | - |
| HV561_RS09020 () | 1734410..1735246 | + | 837 | WP_159629880.1 | formyltetrahydrofolate deformylase | - |
| HV561_RS09025 () | 1735577..1736650 | + | 1074 | WP_176808623.1 | homoserine O-acetyltransferase | - |
| HV561_RS09030 () | 1736731..1738233 | - | 1503 | WP_176808624.1 | lysine--tRNA ligase | - |
| HV561_RS09035 () | 1738391..1739866 | - | 1476 | WP_176808625.1 | ribonuclease G | - |
| HV561_RS09040 () | 1740041..1740742 | - | 702 | WP_176808626.1 | IS3 family transposase ISCce4 | Transposase |
| HV561_RS09045 () | 1740881..1741120 | - | 240 | WP_176808627.1 | IS3 family transposase ISPosp5 | Transposase |
| HV561_RS09050 () | 1741359..1742321 | - | 963 | WP_176808628.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| HV561_RS09055 () | 1742418..1744181 | - | 1764 | WP_176808629.1 | YcaO-like family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|