MGE detailed information
MGE type: Conjugative plasmid MGE length: 117256 bp
Accession: NZ_CP055053 Location: 1..117256 Organism: Shigella dysenteriae strain SWHEFF_51 Replicon: plasmid unnamed1
Accession: NZ_CP055053 Location: 1..117256 Organism: Shigella dysenteriae strain SWHEFF_51 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUZ69_RS24215 (1) | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| HUZ69_RS24220 (1263) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| HUZ69_RS24225 (2124) | 2124..2258 | - | 135 | Protein_2 | serine/threonine protein kinase | - |
| HUZ69_RS24230 (2760) | 2760..4259 | - | 1500 | WP_012775847.1 | alpha/beta hydrolase | - |
| HUZ69_RS24235 (4352) | 4352..5300 | - | 949 | Protein_4 | Outer membrane protease OmpP | VF |
| HUZ69_RS24240 (5949) | 5949..10136 | + | 4188 | WP_239594267.1 | Outer membrane protein IcsA autotransporter | VF |
| HUZ69_RS24245 (10773) | 10773..16082 | + | 5310 | WP_239594269.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| HUZ69_RS24250 (16836) | 16836..17528 | + | 693 | WP_032221916.1 | hypothetical protein | - |
| HUZ69_RS24255 (18071) | 18071..18440 | - | 370 | Protein_8 | IS3 family transposase | - |
| HUZ69_RS24260 (18455) | 18455..19914 | - | 1460 | Protein_9 | IS66 family transposase | - |
| HUZ69_RS24265 (19906) | 19906..20103 | - | 198 | Protein_10 | IS3 family transposase | - |
| HUZ69_RS24270 (20774) | 20774..20962 | + | 189 | WP_000131420.1 | hypothetical protein | - |
| HUZ69_RS24275 (21565) | 21565..21978 | + | 414 | WP_032221911.1 | hypothetical protein | - |
| HUZ69_RS24280 (22153) | 22153..22548 | + | 396 | WP_000491615.1 | polymer-forming cytoskeletal protein | - |
| HUZ69_RS24285 (22712) | 22712..23128 | + | 417 | WP_032221909.1 | hypothetical protein | - |
| HUZ69_RS24290 (23231) | 23231..24292 | + | 1062 | WP_068858826.1 | EAL domain-containing protein | - |
| HUZ69_RS24295 (24700) | 24700..24861 | - | 162 | Protein_16 | transposase | - |
| HUZ69_RS24300 (24998) | 24998..25291 | - | 294 | Protein_17 | IS3 family transposase ISKpn37 | Transposase |
| HUZ69_RS24305 (25277) | 25277..25441 | + | 165 | WP_225390958.1 | hypothetical protein | - |
| HUZ69_RS24310 (25597) | 25597..26097 | + | 501 | Protein_19 | IS21 family transposase IS100kyp | Transposase |
| HUZ69_RS24315 (26094) | 26094..26789 | + | 696 | WP_074440817.1 | IS21 family transposase IS100kyp | Transposase |
| HUZ69_RS24320 (27008) | 27008..27814 | - | 807 | WP_020219156.1 | site-specific integrase | - |
| HUZ69_RS24325 (27815) | 27815..28120 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HUZ69_RS24330 (28122) | 28122..28340 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HUZ69_RS24335 (29050) | 29050..31671 | + | 2622 | WP_020219157.1 | histidinol-phosphatase | - |
| HUZ69_RS24340 (32041) | 32041..33036 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| HUZ69_RS24345 (33079) | 33079..33972 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| HUZ69_RS24350 (34082) | 34082..34594 | - | 513 | WP_194161621.1 | hypothetical protein | - |
| HUZ69_RS24355 (35228) | 35228..35431 | + | 204 | WP_020219159.1 | hypothetical protein | - |
| HUZ69_RS24360 (35421) | 35421..35702 | - | 282 | Protein_29 | korC | - |
| HUZ69_RS24365 (35699) | 35699..36826 | - | 1128 | WP_020219161.1 | DUF4238 domain-containing protein | - |
| HUZ69_RS24370 (36860) | 36860..38383 | - | 1524 | WP_233403352.1 | hypothetical protein | - |
| HUZ69_RS24375 (38660) | 38660..39439 | - | 780 | WP_020219164.1 | hypothetical protein | - |
| HUZ69_RS24380 (39452) | 39452..39952 | - | 501 | WP_020219165.1 | HEPN family nuclease | - |
| HUZ69_RS24385 (40226) | 40226..40486 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| HUZ69_RS24390 (40483) | 40483..41073 | + | 591 | WP_020219166.1 | hypothetical protein | - |
| HUZ69_RS24395 (41091) | 41091..41438 | - | 348 | WP_194161622.1 | DUF6404 family protein | - |
| HUZ69_RS24400 (41728) | 41728..42210 | - | 483 | WP_194161623.1 | hypothetical protein | - |
| HUZ69_RS24405 (42327) | 42327..43175 | - | 849 | WP_020219167.1 | 3'-5' exonuclease | - |
| HUZ69_RS24410 (43221) | 43221..43499 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| HUZ69_RS24415 (43499) | 43499..43768 | - | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| HUZ69_RS24420 (43841) | 43841..43981 | - | 141 | WP_012512742.1 | hypothetical protein | - |
| HUZ69_RS24425 (44682) | 44682..45539 | - | 858 | WP_019842754.1 | incFII family plasmid replication initiator RepA | - |
| HUZ69_RS24430 (45532) | 45532..46014 | - | 483 | WP_074149688.1 | hypothetical protein | - |
| HUZ69_RS24435 (46007) | 46007..46054 | - | 48 | WP_229471593.1 | hypothetical protein | - |
| HUZ69_RS24440 (46045) | 46045..46296 | + | 252 | WP_223195197.1 | replication protein RepA | - |
| HUZ69_RS24445 (46313) | 46313..46570 | - | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| HUZ69_RS24450 (46833) | 46833..46979 | - | 147 | Protein_47 | Hok/Gef family protein | - |
| - (47023) | 47023..47084 | + | 62 | NuclAT_1 | - | - |
| - (47023) | 47023..47084 | + | 62 | NuclAT_1 | - | - |
| - (47023) | 47023..47084 | + | 62 | NuclAT_1 | - | - |
| - (47023) | 47023..47084 | + | 62 | NuclAT_1 | - | - |
| HUZ69_RS24455 (47668) | 47668..47880 | - | 213 | WP_032084501.1 | hypothetical protein | - |
| HUZ69_RS24460 (48014) | 48014..48574 | - | 561 | WP_063073483.1 | fertility inhibition protein FinO | - |
| HUZ69_RS24465 (48629) | 48629..49375 | - | 747 | WP_089533201.1 | conjugal transfer pilus acetylase TraX | - |
| HUZ69_RS24470 (49395) | 49395..54665 | - | 5271 | WP_109954974.1 | Multifunctional conjugation protein TraI | Relaxase |
| HUZ69_RS24475 (54665) | 54665..56827 | - | 2163 | WP_001332348.1 | type IV conjugative transfer system coupling protein TraD | - |
| HUZ69_RS24480 (57079) | 57079..57810 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| HUZ69_RS24485 (57824) | 57824..58333 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| HUZ69_RS24490 (58330) | 58330..61155 | - | 2826 | WP_001007030.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| HUZ69_RS24495 (61152) | 61152..62525 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| HUZ69_RS24500 (62525) | 62525..62887 | - | 363 | WP_074149687.1 | P-type conjugative transfer protein TrbJ | - |
| HUZ69_RS24505 (62817) | 62817..63362 | - | 546 | WP_000052614.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HUZ69_RS24510 (63349) | 63349..63633 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HUZ69_RS24515 (63752) | 63752..64098 | - | 347 | Protein_60 | conjugal transfer protein TrbA | - |
| HUZ69_RS24520 (64114) | 64114..64857 | - | 744 | WP_063073478.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HUZ69_RS24525 (64850) | 64850..65107 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| HUZ69_RS24530 (65134) | 65134..66942 | - | 1809 | WP_001567342.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HUZ69_RS24535 (66939) | 66939..67577 | - | 639 | WP_089541249.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HUZ69_RS24540 (67586) | 67586..68578 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| HUZ69_RS24545 (68575) | 68575..69207 | - | 633 | WP_001749440.1 | type-F conjugative transfer system protein TraW | - |
| HUZ69_RS24550 (69204) | 69204..69590 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| HUZ69_RS24555 (69587) | 69587..72217 | - | 2631 | WP_000069755.1 | type IV secretion system protein TraC | - |
| HUZ69_RS24560 (72343) | 72343..72705 | - | 363 | WP_000836675.1 | hypothetical protein | - |
| HUZ69_RS24565 (72733) | 72733..72948 | - | 216 | WP_000556747.1 | hypothetical protein | - |
| HUZ69_RS24570 (73028) | 73028..73501 | - | 474 | WP_194161624.1 | hypothetical protein | - |
| HUZ69_RS24575 (73494) | 73494..73907 | - | 414 | WP_000549581.1 | hypothetical protein | - |
| HUZ69_RS24580 (73900) | 73900..74121 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| HUZ69_RS24585 (74256) | 74256..74771 | - | 516 | WP_000809874.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HUZ69_RS24590 (74768) | 74768..75088 | - | 321 | WP_001057307.1 | conjugal transfer protein TrbD | - |
| HUZ69_RS24595 (75075) | 75075..75665 | - | 591 | WP_000002784.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| HUZ69_RS24600 (75655) | 75655..77082 | - | 1428 | WP_000146657.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| HUZ69_RS24605 (77082) | 77082..77810 | - | 729 | WP_214673585.1 | type-F conjugative transfer system secretin TraK | - |
| HUZ69_RS24610 (77797) | 77797..78363 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| HUZ69_RS24615 (78385) | 78385..78696 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HUZ69_RS24620 (78711) | 78711..79070 | - | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| HUZ69_RS24625 (79103) | 79103..79504 | - | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| HUZ69_RS24630 (79597) | 79597..80286 | - | 690 | WP_000283383.1 | conjugal transfer transcriptional regulator TraJ | - |
| HUZ69_RS24635 (80479) | 80479..80862 | - | 384 | WP_001151522.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HUZ69_RS24640 (81195) | 81195..81785 | + | 591 | WP_165835419.1 | hypothetical protein | VF |
| HUZ69_RS24645 (82082) | 82082..82902 | - | 821 | Protein_86 | DUF932 domain-containing protein | - |
| HUZ69_RS24650 (83021) | 83021..83308 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| HUZ69_RS24655 (83333) | 83333..83539 | - | 207 | WP_000547968.1 | hypothetical protein | - |
| HUZ69_RS24660 (83609) | 83609..83782 | + | 174 | Protein_89 | hypothetical protein | - |
| HUZ69_RS24665 (83780) | 83780..84010 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| HUZ69_RS24670 (84230) | 84230..84355 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HUZ69_RS24675 (84297) | 84297..84446 | - | 150 | Protein_92 | plasmid maintenance protein Mok | - |
| - (84432) | 84432..84656 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (84432) | 84432..84656 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (84432) | 84432..84656 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (84432) | 84432..84656 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| HUZ69_RS24680 (84468) | 84468..84656 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| HUZ69_RS24685 (84668) | 84668..85387 | - | 720 | WP_239594264.1 | plasmid SOS inhibition protein A | - |
| HUZ69_RS24690 (85384) | 85384..85818 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| HUZ69_RS24695 (85873) | 85873..87831 | - | 1959 | WP_001775124.1 | ParB/RepB/Spo0J family partition protein | - |
| HUZ69_RS24700 (87897) | 87897..88130 | - | 234 | WP_089533205.1 | DUF905 family protein | - |
| HUZ69_RS24705 (88193) | 88193..88732 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| HUZ69_RS24710 (88758) | 88758..88964 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| HUZ69_RS24715 (89205) | 89205..89474 | - | 270 | WP_071977877.1 | hypothetical protein | - |
| HUZ69_RS24720 (89375) | 89375..89599 | - | 225 | WP_016238251.1 | hypothetical protein | - |
| HUZ69_RS24725 (89625) | 89625..90188 | - | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| HUZ69_RS24730 (90236) | 90236..91597 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| HUZ69_RS24735 (91649) | 91649..91879 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| HUZ69_RS24740 (92914) | 92914..93105 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| HUZ69_RS24745 (93102) | 93102..93536 | - | 435 | WP_014106967.1 | DUF1380 family protein | - |
| HUZ69_RS24750 (93583) | 93583..94008 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| HUZ69_RS24755 (94425) | 94425..95201 | - | 777 | WP_063073488.1 | hypothetical protein | - |
| HUZ69_RS24760 (95252) | 95252..95770 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| HUZ69_RS24765 (95700) | 95700..95921 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| HUZ69_RS24770 (95922) | 95922..96605 | - | 684 | WP_001775017.1 | DNA methylase | - |
| HUZ69_RS24775 (96682) | 96682..96987 | - | 306 | WP_063073472.1 | hypothetical protein | - |
| HUZ69_RS24780 (96991) | 96991..97893 | - | 903 | WP_148934335.1 | DUF1281 domain-containing protein | - |
| HUZ69_RS24785 (98311) | 98311..98559 | + | 249 | WP_001775014.1 | DinI-like family protein | - |
| HUZ69_RS24790 (98556) | 98556..98993 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HUZ69_RS24795 (98993) | 98993..100263 | + | 1271 | Protein_116 | Y-family DNA polymerase | - |
| HUZ69_RS24800 (100268) | 100268..100660 | - | 393 | WP_063073471.1 | plasmid partitioning/stability family protein | - |
| HUZ69_RS24805 (100665) | 100665..101636 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| HUZ69_RS24810 (101865) | 101865..102509 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| HUZ69_RS24815 (102503) | 102503..102778 | + | 276 | WP_050858693.1 | hypothetical protein | - |
| HUZ69_RS24820 (102930) | 102930..103721 | - | 792 | WP_000016494.1 | site-specific integrase | - |
| HUZ69_RS24825 (103718) | 103718..104224 | - | 507 | WP_001505085.1 | hypothetical protein | - |
| HUZ69_RS24830 (104215) | 104215..104919 | + | 705 | WP_239594266.1 | IS6-like element IS26 family transposase | - |
| HUZ69_RS24835 (105308) | 105308..105733 | + | 426 | WP_024198578.1 | hypothetical protein | - |
| HUZ69_RS24840 (105750) | 105750..106613 | + | 864 | WP_050858821.1 | toll/interleukin-1 receptor domain-containing protein | - |
| HUZ69_RS24845 (106856) | 106856..107245 | - | 390 | Protein_126 | ISNCY family transposase ISKpn21 | Transposase |
| HUZ69_RS24850 (107310) | 107310..108014 | + | 705 | WP_001067848.1 | IS6 family transposase IS15DI | Transposase |
| HUZ69_RS24855 (108161) | 108161..108337 | - | 177 | Protein_128 | hypothetical protein | - |
| HUZ69_RS24860 (108294) | 108294..108524 | + | 231 | WP_063073411.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HUZ69_RS24865 (108521) | 108521..108937 | + | 417 | WP_063073410.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HUZ69_RS24870 (109011) | 109011..110573 | + | 1563 | WP_063073409.1 | AAA family ATPase | - |
| HUZ69_RS24875 (110558) | 110558..111580 | + | 1023 | WP_063073408.1 | hypothetical protein | - |
| HUZ69_RS24880 (111867) | 111867..112097 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| HUZ69_RS24885 (112094) | 112094..112189 | + | 96 | Protein_134 | VapC toxin family PIN domain ribonuclease | - |
| HUZ69_RS24890 (112248) | 112248..113032 | - | 785 | Protein_135 | IS21-like element helper ATPase IstB | - |
| HUZ69_RS24895 (113032) | 113032..113685 | - | 654 | Protein_136 | IS21 family transposase IS21 | Transposase |
| HUZ69_RS24900 (115441) | 115441..116082 | + | 642 | WP_089533208.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|