MGE detailed information
MGE type: Conjugative plasmid MGE length: 108557 bp
Accession: NZ_CP054663 Location: 1..108557 Organism: Escherichia coli strain IGC_RcoliRes_1.1 Replicon: plasmid unnamed1
Accession: NZ_CP054663 Location: 1..108557 Organism: Escherichia coli strain IGC_RcoliRes_1.1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUR93_RS25665 (1) | 1..978 | + | 978 | WP_061892150.1 | RepB family plasmid replication initiator protein | - |
| HUR93_RS25670 (1257) | 1257..1997 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| HUR93_RS25675 (2856) | 2856..3698 | - | 843 | WP_077698982.1 | helix-turn-helix transcriptional regulator | - |
| HUR93_RS25680 (4109) | 4109..4678 | + | 570 | WP_061892148.1 | type 1 fimbrial protein | - |
| HUR93_RS25685 (4753) | 4753..5463 | + | 711 | WP_032334886.1 | putative fimbrial chaperone protein ElfD | VF |
| HUR93_RS25690 (5429) | 5429..8014 | + | 2586 | WP_164997245.1 | Outer membrane usher protein FimD | VF |
| HUR93_RS25695 (8031) | 8031..8957 | + | 927 | WP_061892147.1 | fimbrial protein | - |
| HUR93_RS25700 (9041) | 9041..9673 | - | 633 | Protein_7 | integrase core domain-containing protein | - |
| HUR93_RS25705 (9778) | 9778..10158 | + | 381 | WP_073972121.1 | IS66 family transposase ISEc8 | Transposase |
| HUR93_RS25710 (10155) | 10155..10502 | + | 348 | WP_061892145.1 | IS66 family transposase ISEc8 | Transposase |
| HUR93_RS25715 (10552) | 10552..11965 | + | 1414 | Protein_10 | IS66 family transposase ISEc8 | Transposase |
| HUR93_RS25720 (12182) | 12182..12910 | - | 729 | WP_061892143.1 | membrane lipoprotein lipid attachment site-containing protein | - |
| HUR93_RS25725 (13028) | 13028..13477 | - | 450 | Protein_12 | protein rep | - |
| HUR93_RS25730 (13537) | 13537..13959 | - | 423 | WP_237897981.1 | type II toxin-antitoxin system VapC family toxin | - |
| HUR93_RS25735 (13956) | 13956..14210 | - | 255 | WP_032334811.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| HUR93_RS25740 (14595) | 14595..16847 | - | 2253 | WP_032334847.1 | Catalase HPII | VF |
| HUR93_RS25745 (17333) | 17333..18232 | - | 900 | Protein_16 | IS110 family transposase IS5075 | Transposase |
| HUR93_RS25750 (18320) | 18320..18667 | + | 348 | WP_032334749.1 | DUF6404 family protein | - |
| HUR93_RS25755 (18685) | 18685..19275 | - | 591 | WP_032334750.1 | hypothetical protein | - |
| HUR93_RS25760 (19275) | 19275..19532 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| HUR93_RS25765 (19760) | 19760..20002 | + | 243 | Protein_20 | hypothetical protein | - |
| HUR93_RS25770 (20129) | 20129..20347 | + | 219 | WP_032334753.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HUR93_RS25775 (20349) | 20349..20654 | + | 306 | WP_032334755.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HUR93_RS25780 (20655) | 20655..21461 | + | 807 | WP_061892142.1 | site-specific integrase | - |
| HUR93_RS25785 (22264) | 22264..22454 | - | 191 | Protein_24 | hypothetical protein | - |
| HUR93_RS25790 (22977) | 22977..23891 | + | 915 | WP_073972117.1 | transcriptional regulator TdcA | - |
| HUR93_RS25795 (23931) | 23931..25100 | - | 1170 | WP_000656436.1 | M20 family metallopeptidase | - |
| HUR93_RS25800 (25116) | 25116..25577 | - | 462 | WP_237897982.1 | hypothetical protein | - |
| HUR93_RS25805 (25590) | 25590..26390 | - | 801 | WP_000854127.1 | DUF3100 domain-containing protein | - |
| HUR93_RS25810 (26665) | 26665..27350 | + | 686 | Protein_29 | tyrosine-type recombinase/integrase | - |
| HUR93_RS25815 (27530) | 27530..28174 | + | 645 | WP_001144036.1 | ParA family protein | - |
| HUR93_RS25820 (28261) | 28261..28569 | + | 309 | WP_061892141.1 | hypothetical protein | - |
| HUR93_RS25825 (28983) | 28983..29963 | + | 981 | WP_032334760.1 | plasmid segregation protein ParM | - |
| HUR93_RS25830 (29956) | 29956..30372 | + | 417 | WP_032334761.1 | plasmid partitioning/stability family protein | - |
| HUR93_RS25835 (30374) | 30374..30691 | - | 318 | Protein_34 | DUF4113 domain-containing protein | - |
| HUR93_RS25840 (30914) | 30914..31815 | + | 902 | Protein_35 | DUF1281 domain-containing protein | - |
| HUR93_RS25845 (31779) | 31779..31874 | + | 96 | Protein_36 | hypothetical protein | - |
| HUR93_RS25850 (31989) | 31989..32414 | + | 426 | WP_001198918.1 | antirestriction protein | - |
| HUR93_RS25855 (32461) | 32461..32880 | + | 420 | WP_032334762.1 | DUF1380 family protein | - |
| HUR93_RS25860 (32880) | 32880..33071 | + | 192 | WP_032334763.1 | hypothetical protein | - |
| HUR93_RS25865 (33068) | 33068..33214 | + | 147 | WP_171840569.1 | hypothetical protein | - |
| HUR93_RS25870 (33440) | 33440..33594 | - | 155 | Protein_41 | hypothetical protein | - |
| HUR93_RS25875 (34111) | 34111..34341 | + | 231 | WP_032334764.1 | hypothetical protein | - |
| HUR93_RS25880 (34393) | 34393..35754 | + | 1362 | WP_032334766.1 | DUF3560 domain-containing protein | - |
| HUR93_RS25885 (35802) | 35802..36206 | + | 405 | WP_032334834.1 | class I SAM-dependent methyltransferase | - |
| HUR93_RS25890 (36273) | 36273..37277 | + | 1005 | WP_032334768.1 | IS110 family transposase ISSfl8 | Transposase |
| HUR93_RS25895 (37558) | 37558..37716 | + | 159 | Protein_46 | class I SAM-dependent methyltransferase | - |
| HUR93_RS25900 (37868) | 37868..38098 | + | 231 | WP_001380705.1 | hypothetical protein | - |
| HUR93_RS25905 (38571) | 38571..39098 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| HUR93_RS25910 (39154) | 39154..39387 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| HUR93_RS25915 (39446) | 39446..41404 | + | 1959 | WP_061892140.1 | ParB/RepB/Spo0J family partition protein | - |
| HUR93_RS25920 (41459) | 41459..41893 | + | 435 | WP_061892139.1 | conjugation system SOS inhibitor PsiB | - |
| HUR93_RS25925 (41890) | 41890..42652 | + | 763 | Protein_52 | plasmid SOS inhibition protein A | - |
| HUR93_RS25930 (42621) | 42621..42809 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (42621) | 42621..42845 | + | 225 | NuclAT_0 | - | - |
| - (42621) | 42621..42845 | + | 225 | NuclAT_0 | - | - |
| - (42621) | 42621..42845 | + | 225 | NuclAT_0 | - | - |
| - (42621) | 42621..42845 | + | 225 | NuclAT_0 | - | - |
| HUR93_RS25935 (42831) | 42831..42980 | + | 150 | Protein_54 | plasmid maintenance protein Mok | - |
| HUR93_RS25940 (42931) | 42931..43047 | + | 117 | WP_001323520.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HUR93_RS25945 (43267) | 43267..43497 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| HUR93_RS25950 (43495) | 43495..43668 | - | 174 | Protein_57 | hypothetical protein | - |
| HUR93_RS25955 (43738) | 43738..43944 | + | 207 | WP_000547974.1 | hypothetical protein | - |
| HUR93_RS25960 (43969) | 43969..44256 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| HUR93_RS25965 (44376) | 44376..45197 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| HUR93_RS25970 (45494) | 45494..46084 | - | 591 | WP_165850686.1 | hypothetical protein | VF |
| HUR93_RS25975 (46419) | 46419..46802 | + | 384 | WP_046201845.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HUR93_RS25980 (46998) | 46998..47669 | + | 672 | WP_237897983.1 | conjugal transfer transcriptional regulator TraJ | - |
| HUR93_RS25985 (47806) | 47806..48033 | + | 228 | WP_000089265.1 | conjugal transfer relaxosome protein TraY | - |
| HUR93_RS25990 (48066) | 48066..48431 | + | 366 | WP_061892137.1 | type IV conjugative transfer system pilin TraA | - |
| HUR93_RS25995 (48446) | 48446..48757 | + | 312 | WP_000012118.1 | type IV conjugative transfer system protein TraL | - |
| HUR93_RS26000 (48779) | 48779..49345 | + | 567 | WP_061873499.1 | type IV conjugative transfer system protein TraE | - |
| HUR93_RS26005 (49332) | 49332..50060 | + | 729 | WP_061892136.1 | type-F conjugative transfer system secretin TraK | - |
| HUR93_RS26010 (50060) | 50060..51514 | + | 1455 | WP_061892135.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| HUR93_RS26015 (51504) | 51504..52064 | + | 561 | WP_061892134.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| HUR93_RS26020 (52003) | 52003..52275 | + | 273 | WP_061892133.1 | conjugal transfer protein TrbD | - |
| HUR93_RS26025 (52272) | 52272..52787 | + | 516 | WP_061892132.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HUR93_RS26030 (52922) | 52922..53143 | + | 222 | WP_021532666.1 | conjugal transfer protein TraR | - |
| HUR93_RS26035 (53136) | 53136..53609 | + | 474 | WP_061892131.1 | hypothetical protein | - |
| HUR93_RS26040 (53689) | 53689..53907 | + | 219 | WP_061892130.1 | hypothetical protein | - |
| HUR93_RS26045 (53935) | 53935..54282 | + | 348 | WP_000802783.1 | hypothetical protein | - |
| HUR93_RS26050 (54409) | 54409..54543 | + | 135 | Protein_77 | F pilus assembly Type-IV secretion system for plasmid transfer family protein | - |
| HUR93_RS26055 (54735) | 54735..56276 | + | 1542 | WP_061892665.1 | IS21 family transposase ISEc12 | Transposase |
| HUR93_RS26060 (56291) | 56291..57037 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| HUR93_RS26065 (57065) | 57065..57439 | + | 375 | WP_237897976.1 | hypothetical protein | - |
| HUR93_RS26070 (57439) | 57439..57516 | + | 78 | Protein_81 | IS91 family transposase IS91 | Transposase |
| HUR93_RS26075 (57827) | 57827..58228 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HUR93_RS26080 (58161) | 58161..58418 | - | 258 | WP_061892696.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HUR93_RS26085 (58511) | 58511..59164 | - | 654 | WP_061892697.1 | CPBP family intramembrane metalloprotease | - |
| HUR93_RS26090 (59244) | 59244..59402 | - | 159 | WP_061892698.1 | hypothetical protein | - |
| HUR93_RS26095 (60101) | 60101..60958 | - | 858 | WP_061892699.1 | incFII family plasmid replication initiator RepA | - |
| HUR93_RS26100 (60951) | 60951..61025 | - | 75 | WP_061892708.1 | RepA leader peptide Tap | - |
| HUR93_RS26105 (61263) | 61263..61517 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| HUR93_RS26110 (61757) | 61757..62347 | - | 591 | WP_061892700.1 | DUF2726 domain-containing protein | - |
| HUR93_RS26115 (62385) | 62385..62594 | - | 210 | WP_061892701.1 | hemolysin expression modulator Hha | - |
| HUR93_RS26120 (62640) | 62640..63100 | - | 461 | Protein_91 | thermonuclease family protein | - |
| HUR93_RS26125 (63346) | 63346..63558 | - | 213 | WP_061892702.1 | hypothetical protein | - |
| HUR93_RS26130 (63694) | 63694..64254 | - | 561 | WP_061892703.1 | fertility inhibition protein FinO | - |
| HUR93_RS26135 (64309) | 64309..65049 | - | 741 | WP_032334797.1 | conjugal transfer pilus acetylase TraX | - |
| HUR93_RS26140 (65069) | 65069..70339 | - | 5271 | WP_061892704.1 | Multifunctional conjugation protein TraI | Relaxase |
| HUR93_RS26145 (70339) | 70339..72555 | - | 2217 | WP_237897977.1 | type IV conjugative transfer system coupling protein TraD | - |
| HUR93_RS26150 (72606) | 72606..73346 | - | 741 | WP_061892706.1 | hypothetical protein | - |
| HUR93_RS26155 (73549) | 73549..74280 | - | 732 | WP_061892709.1 | conjugal transfer complement resistance protein TraT | - |
| HUR93_RS26160 (74648) | 74648..74824 | - | 177 | WP_171840587.1 | hypothetical protein | - |
| HUR93_RS26165 (74857) | 74857..76812 | - | 1956 | Protein_100 | conjugal transfer mating pair stabilization protein TraG | - |
| HUR93_RS26170 (76897) | 76897..77643 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| HUR93_RS26175 (77658) | 77658..79199 | - | 1542 | WP_061892665.1 | IS21 family transposase ISEc12 | Transposase |
| HUR93_RS26180 (79528) | 79528..79629 | + | 102 | Protein_103 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HUR93_RS26185 (80489) | 80489..81718 | + | 1230 | WP_024227651.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| HUR93_RS26190 (81702) | 81702..84668 | + | 2967 | WP_237897978.1 | putative autotransporter | VF |
| HUR93_RS26195 (84815) | 84815..85075 | + | 261 | WP_237897985.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| HUR93_RS26200 (85291) | 85291..85347 | - | 57 | WP_229997132.1 | hypothetical protein | - |
| HUR93_RS26205 (86242) | 86242..86506 | + | 265 | Protein_108 | IS256 family transposase IS1414 | Transposase |
| HUR93_RS26210 (87054) | 87054..87371 | + | 318 | WP_237897979.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HUR93_RS26215 (87499) | 87499..88017 | + | 519 | WP_032334824.1 | hypothetical protein | VF |
| HUR93_RS26220 (88102) | 88102..90507 | + | 2406 | WP_077875802.1 | Outer membrane usher protein FimD | VF |
| HUR93_RS26225 (90500) | 90500..91192 | + | 693 | WP_024227327.1 | Chaperone protein FaeE | VF |
| HUR93_RS26230 (91179) | 91179..91697 | + | 519 | WP_061892257.1 | fimbrial protein | - |
| HUR93_RS26235 (91705) | 91705..92274 | + | 570 | WP_032334819.1 | hypothetical protein | - |
| HUR93_RS26240 (92399) | 92399..93358 | + | 960 | WP_061892258.1 | hypothetical protein | - |
| HUR93_RS26245 (93522) | 93522..94298 | + | 777 | WP_237897980.1 | EAL domain-containing protein | - |
| HUR93_RS26250 (94549) | 94549..95142 | + | 594 | WP_032334815.1 | histidine phosphatase family protein | - |
| HUR93_RS26255 (95165) | 95165..95329 | - | 165 | Protein_118 | IS1 family transposase | - |
| HUR93_RS26260 (95453) | 95453..95623 | - | 171 | Protein_119 | adhesin | - |
| HUR93_RS26265 (95620) | 95620..96165 | + | 546 | Protein_120 | IS21 family transposase ISEc12 | Transposase |
| HUR93_RS26270 (96180) | 96180..96926 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| HUR93_RS26275 (97092) | 97092..98286 | - | 1195 | Protein_122 | IS91 family transposase IS91 | Transposase |
| HUR93_RS26280 (98286) | 98286..98651 | - | 366 | WP_061892118.1 | hypothetical protein | - |
| HUR93_RS26285 (98861) | 98861..99019 | + | 159 | Protein_124 | IS4 family transposase | - |
| HUR93_RS26295 (101437) | 101437..102876 | + | 1440 | WP_164997246.1 | MFS transporter | - |
| HUR93_RS26300 (102937) | 102937..104616 | + | 1680 | WP_061892152.1 | glycoside hydrolase family 43 protein | - |
| HUR93_RS26305 (105124) | 105124..105306 | + | 183 | Protein_128 | IS3 family transposase ISEc17 | Transposase |
| HUR93_RS26310 (105384) | 105384..105656 | + | 273 | WP_011310366.1 | hypothetical protein | - |
| HUR93_RS26315 (105637) | 105637..106842 | + | 1206 | Protein_130 | IS91 family transposase ISSbo1 | Transposase |
| HUR93_RS26320 (107108) | 107108..107359 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| HUR93_RS26325 (107356) | 107356..107643 | + | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HUR93_RS26330 (107645) | 107645..107923 | + | 279 | Protein_133 | integrase core domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|