MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88052 bp
Accession: NZ_CP054414 Location: 1..88052 Organism: Escherichia coli strain SCU-204 Replicon: plasmid pSCU-204-1
Accession: NZ_CP054414 Location: 1..88052 Organism: Escherichia coli strain SCU-204 Replicon: plasmid pSCU-204-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ42_RS25610 (HHJ42_025220) | 1..978 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| HHJ42_RS25615 (HHJ42_025225) | 1221..1961 | - | 741 | WP_001066952.1 | tyrosine-type recombinase/integrase | - |
| HHJ42_RS25620 (HHJ42_025230) | 2082..2270 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| HHJ42_RS25625 (HHJ42_025240) | 2637..3806 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| HHJ42_RS25630 (HHJ42_025245) | 4032..4207 | - | 176 | Protein_4 | IS3 family transposase | - |
| HHJ42_RS25635 (HHJ42_025250) | 4653..4925 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| HHJ42_RS25640 (HHJ42_025255) | 5462..5886 | - | 425 | Protein_6 | transposase | - |
| HHJ42_RS25645 (HHJ42_025260) | 6168..8138 | + | 1971 | WP_001298664.1 | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor | - |
| HHJ42_RS25650 (HHJ42_025265) | 8145..8936 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| HHJ42_RS25655 (HHJ42_025270) | 8999..9607 | - | 609 | Protein_9 | IS66 family transposase | - |
| HHJ42_RS25660 (HHJ42_025275) | 9675..10457 | - | 783 | WP_001300609.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| HHJ42_RS25665 (HHJ42_025280) | 10454..11476 | - | 1023 | WP_001310017.1 | IS21-like element IS100 family transposase | - |
| HHJ42_RS25670 (HHJ42_025285) | 11562..12507 | - | 946 | Protein_12 | IS66 family transposase | - |
| HHJ42_RS25675 (HHJ42_025290) | 12556..12903 | - | 348 | WP_000612626.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| HHJ42_RS25680 (HHJ42_025295) | 12900..13304 | - | 405 | WP_000839179.1 | transposase | - |
| HHJ42_RS25685 (HHJ42_025300) | 13384..13722 | - | 339 | Protein_15 | DDE-type integrase/transposase/recombinase | - |
| HHJ42_RS25690 (HHJ42_025305) | 13806..15314 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| HHJ42_RS25695 (HHJ42_025310) | 15987..16725 | - | 739 | Protein_17 | IS3 family transposase | - |
| HHJ42_RS25700 (HHJ42_025315) | 16828..17088 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| HHJ42_RS25705 (HHJ42_025320) | 17085..17593 | + | 509 | Protein_19 | hypothetical protein | - |
| HHJ42_RS25710 (HHJ42_025325) | 17613..17917 | - | 305 | Protein_20 | DUF6404 family protein | - |
| HHJ42_RS25715 (HHJ42_025335) | 19868..20493 | + | 626 | Protein_21 | replication initiation protein | - |
| HHJ42_RS25720 (HHJ42_025340) | 20867..21742 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| HHJ42_RS25725 (HHJ42_025345) | 21750..22526 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| HHJ42_RS25730 (HHJ42_025350) | 22695..24956 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| HHJ42_RS25735 (HHJ42_025355) | 25025..26200 | + | 1176 | WP_001020413.1 | enterotoxin production-related protein TieB | - |
| HHJ42_RS25740 (HHJ42_025360) | 26723..27028 | - | 306 | Protein_26 | IS91 family transposase | - |
| HHJ42_RS25745 (HHJ42_025365) | 27054..27793 | + | 740 | Protein_27 | IS3 family transposase | - |
| HHJ42_RS25750 (HHJ42_026245) | 28466..28780 | + | 315 | Protein_28 | hypothetical protein | - |
| HHJ42_RS25755 (HHJ42_026250) | 28781..28954 | + | 174 | Protein_29 | transposase | - |
| HHJ42_RS25760 (HHJ42_025375) | 29104..29737 | - | 634 | Protein_30 | histidine-type phosphatase | - |
| HHJ42_RS25765 (HHJ42_025380) | 29859..30344 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| HHJ42_RS25770 (HHJ42_025385) | 30369..30854 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| HHJ42_RS25775 (HHJ42_025390) | 30841..31536 | - | 696 | WP_000117262.1 | ABC transporter ATP-binding protein | - |
| HHJ42_RS25780 (HHJ42_025395) | 31541..32671 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| HHJ42_RS25785 (HHJ42_025400) | 32661..33944 | - | 1284 | WP_171274539.1 | ABC transporter permease | - |
| HHJ42_RS25790 (HHJ42_025405) | 33947..35326 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| HHJ42_RS25795 (HHJ42_025410) | 35430..35957 | - | 528 | WP_000178050.1 | iron transporter | - |
| HHJ42_RS25800 (HHJ42_025415) | 35998..37884 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| HHJ42_RS25805 (HHJ42_025420) | 38231..38992 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| HHJ42_RS25810 (HHJ42_025425) | 39229..39735 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| HHJ42_RS25815 (HHJ42_025430) | 39725..39895 | - | 171 | Protein_41 | DsbA family protein | - |
| HHJ42_RS25820 | 40033..40146 | - | 114 | Protein_42 | IS6 family transposase | - |
| HHJ42_RS25825 (HHJ42_025435) | 40346..40953 | + | 608 | Protein_43 | IS1 family transposase | - |
| HHJ42_RS25830 (HHJ42_025440) | 41130..41834 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HHJ42_RS25835 (HHJ42_025445) | 41884..42603 | + | 720 | Protein_45 | helicase RepA family protein | - |
| HHJ42_RS25840 (HHJ42_025450) | 42590..43441 | + | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| HHJ42_RS25845 (HHJ42_025460) | 43749..44564 | + | 816 | WP_001043265.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| HHJ42_RS25850 (HHJ42_025465) | 44625..45428 | + | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| HHJ42_RS25855 (HHJ42_025470) | 45428..46264 | + | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| HHJ42_RS25860 (HHJ42_025475) | 46325..47029 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HHJ42_RS25865 (HHJ42_025480) | 47094..48344 | - | 1251 | Protein_51 | transposase | - |
| HHJ42_RS25870 (HHJ42_025485) | 48419..49087 | - | 669 | WP_001300294.1 | EAL domain-containing protein | - |
| HHJ42_RS25875 (HHJ42_025490) | 49123..49359 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| HHJ42_RS25880 (HHJ42_025495) | 49356..49718 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| HHJ42_RS25885 (HHJ42_025500) | 49736..51430 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| HHJ42_RS25890 (HHJ42_025505) | 51482..51904 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| HHJ42_RS25895 (HHJ42_025510) | 51940..52215 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| HHJ42_RS25900 (HHJ42_025515) | 52229..52579 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| HHJ42_RS25905 (HHJ42_025520) | 52651..53085 | + | 435 | WP_000429836.1 | Hg(II)-responsive transcriptional regulator | - |
| HHJ42_RS25915 (HHJ42_025530) | 54138..54539 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HHJ42_RS25920 (HHJ42_025535) | 54472..54729 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HHJ42_RS25925 (HHJ42_025540) | 54822..55475 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HHJ42_RS25930 (HHJ42_025545) | 55938..56477 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| HHJ42_RS26560 | 56503..56709 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| HHJ42_RS26565 | 56950..57201 | - | 252 | WP_071579736.1 | hypothetical protein | - |
| HHJ42_RS25935 (HHJ42_025555) | 57120..57326 | - | 207 | WP_001774176.1 | hypothetical protein | - |
| HHJ42_RS25940 (HHJ42_025560) | 57352..57915 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| HHJ42_RS25945 (HHJ42_025565) | 57963..59323 | - | 1361 | Protein_69 | DUF3560 domain-containing protein | - |
| HHJ42_RS25950 (HHJ42_025575) | 59375..59605 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| HHJ42_RS25955 (HHJ42_025580) | 60640..60831 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| HHJ42_RS25960 (HHJ42_025585) | 60828..61250 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| HHJ42_RS25965 (HHJ42_025590) | 61297..61722 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| HHJ42_RS25970 (HHJ42_025595) | 62139..62915 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| HHJ42_RS25975 (HHJ42_025600) | 62966..63484 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| HHJ42_RS25980 (HHJ42_025605) | 63414..63635 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| HHJ42_RS25985 (HHJ42_025610) | 63636..64319 | - | 684 | WP_000086185.1 | DNA methylase | - |
| HHJ42_RS25990 (HHJ42_025615) | 64396..64707 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| HHJ42_RS25995 (HHJ42_025620) | 64704..65606 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| HHJ42_RS26000 (HHJ42_025115) | 66473..67444 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HHJ42_RS26005 (HHJ42_025120) | 67444..68610 | - | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| HHJ42_RS26010 (HHJ42_025125) | 69198..69953 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HHJ42_RS26015 (HHJ42_025130) | 70727..71533 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| HHJ42_RS26020 (HHJ42_025135) | 71534..71839 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HHJ42_RS26025 (HHJ42_025140) | 71841..72059 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HHJ42_RS26030 (HHJ42_025145) | 72626..73138 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| HHJ42_RS26035 (HHJ42_025150) | 73172..74305 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| HHJ42_RS26040 (HHJ42_025155) | 74472..75245 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| HHJ42_RS26045 (HHJ42_025160) | 75258..75758 | - | 501 | WP_001773886.1 | HEPN family nuclease | - |
| HHJ42_RS26050 (HHJ42_025165) | 76023..76253 | + | 231 | WP_001261278.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HHJ42_RS26055 (HHJ42_025170) | 76250..76666 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HHJ42_RS26060 (HHJ42_025175) | 76711..80505 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| HHJ42_RS26065 (HHJ42_025180) | 80886..81116 | + | 231 | WP_001261286.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HHJ42_RS26070 (HHJ42_025185) | 81113..81529 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HHJ42_RS26075 (HHJ42_025190) | 81604..83169 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| HHJ42_RS26080 (HHJ42_025195) | 83154..84176 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| HHJ42_RS26090 (HHJ42_025205) | 85430..86127 | + | 698 | WP_223369285.1 | IS1-like element IS1A family transposase | - |
| HHJ42_RS26095 (HHJ42_025210) | 86307..86820 | - | 514 | Protein_99 | DUF4113 domain-containing protein | - |
| HHJ42_RS26100 (HHJ42_026255) | 86881..86985 | - | 105 | Protein_100 | AAA family ATPase | - |
| HHJ42_RS26105 (HHJ42_025215) | 86987..87310 | - | 324 | Protein_101 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|