MGE detailed information
MGE type: IS/Tn MGE length: 1221 bp
Accession: NZ_CP054353 Location: 1927743..1928963 Organism: Escherichia coli strain SCU-172 Replicon: chromosome
Accession: NZ_CP054353 Location: 1927743..1928963 Organism: Escherichia coli strain SCU-172 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPE50_RS09285 () | 1922864..1923922 | + | 1059 | WP_000492324.1 | transport protein YeeE | - |
| HPE50_RS09290 () | 1923936..1924163 | + | 228 | WP_000985273.1 | sulfurtransferase TusA family protein | - |
| HPE50_RS09295 () | 1924206..1925633 | - | 1428 | WP_000980614.1 | exodeoxyribonuclease I | - |
| HPE50_RS09300 () | 1925842..1927008 | + | 1167 | WP_001297905.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| HPE50_RS09305 () | 1927206..1927724 | + | 519 | WP_000115885.1 | ClbS/DfsB family four-helix bundle protein | - |
| HPE50_RS09310 () | 1927743..1928963 | + | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| HPE50_RS09315 () | 1929020..1929493 | + | 474 | WP_001105376.1 | DNA gyrase inhibitor SbmC | - |
| HPE50_RS09320 () | 1929691..1930749 | + | 1059 | WP_001200894.1 | FUSC family protein | - |
| HPE50_RS09325 () | 1930921..1931250 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| HPE50_RS09330 () | 1931351..1931533 | - | 183 | WP_001016348.1 | hypothetical protein | - |
| HPE50_RS09335 () | 1931587..1931733 | + | 147 | Protein_1802 | transposase domain-containing protein | - |
| HPE50_RS09340 () | 1932022..1932135 | - | 114 | WP_001161660.1 | DUF957 domain-containing protein | - |
| HPE50_RS09345 () | 1932148..1932342 | - | 195 | WP_000988601.1 | hypothetical protein | - |
| HPE50_RS09350 () | 1932339..1932713 | - | 375 | WP_000854814.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| HPE50_RS09355 () | 1932802..1933107 | - | 306 | WP_128857213.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HPE50_RS09360 () | 1933244..1933465 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli Nissle 1917 | IS/Tn | TA47049 | NZ_CP007799 | 4503424..4504644 | 0 |