MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39154 bp
Accession: NZ_CP054346 Location: 1..39154 Organism: Escherichia coli strain SCU-176 Replicon: plasmid pSCU-176-1
Accession: NZ_CP054346 Location: 1..39154 Organism: Escherichia coli strain SCU-176 Replicon: plasmid pSCU-176-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPE52_RS24190 () | 146..628 | + | 483 | WP_174165907.1 | Afimbrial adhesin AFA-III | VF |
| HPE52_RS24195 () | 1831..2145 | + | 315 | WP_162828185.1 | IS4 family transposase ISLpn6 | Transposase |
| HPE52_RS24200 () | 2156..2797 | - | 642 | Protein_2 | IS66 family transposase ISEc22 | Transposase |
| HPE52_RS24205 () | 2801..3075 | - | 275 | Protein_3 | IS3 family transposase IS1203 | Transposase |
| HPE52_RS24210 () | 3258..4274 | - | 1017 | WP_001310555.1 | IS5 family transposase IS5D | Transposase |
| HPE52_RS24215 () | 4307..5329 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| HPE52_RS24220 () | 5314..6879 | - | 1566 | WP_115766545.1 | AAA family ATPase | - |
| HPE52_RS24225 () | 6954..7370 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HPE52_RS24230 () | 7367..7597 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HPE52_RS24235 () | 8227..8445 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HPE52_RS24240 () | 8447..8752 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HPE52_RS24245 () | 8753..9562 | + | 810 | WP_000016979.1 | site-specific integrase | - |
| HPE52_RS24250 () | 9700..9975 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| HPE52_RS24255 () | 9969..10613 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| HPE52_RS24260 () | 10842..11813 | + | 972 | WP_001103694.1 | hypothetical protein | - |
| HPE52_RS24265 () | 11818..12210 | + | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| HPE52_RS24270 () | 12215..13038 | - | 824 | Protein_16 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HPE52_RS24275 () | 13630..14607 | + | 978 | WP_047090398.1 | RepB family plasmid replication initiator protein | - |
| HPE52_RS24280 () | 14893..15633 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| HPE52_RS24285 () | 15754..15942 | - | 189 | WP_115766544.1 | serine/threonine protein kinase | - |
| HPE52_RS24290 () | 16309..17478 | + | 1170 | WP_001072359.1 | hypothetical protein | - |
| HPE52_RS24295 () | 17704..17879 | - | 176 | Protein_21 | IS3 family transposase | - |
| HPE52_RS24300 () | 18325..18597 | - | 273 | WP_113394888.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HPE52_RS24305 () | 19122..19558 | - | 437 | Protein_23 | IS3 family transposase IS2 | Transposase |
| HPE52_RS24310 () | 19840..21810 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| HPE52_RS24315 () | 21817..22608 | + | 792 | WP_113394902.1 | DUF4198 domain-containing protein | - |
| HPE52_RS24320 () | 22671..23279 | - | 609 | Protein_26 | IS66 family transposase ISEc22 | Transposase |
| HPE52_RS24325 () | 23347..24126 | - | 780 | WP_001323403.1 | IS21 family transposase IS100kyp | Transposase |
| HPE52_RS24330 () | 24126..25148 | - | 1023 | WP_115766562.1 | IS21 family transposase IS100kyp | Transposase |
| HPE52_RS24335 () | 25234..26169 | - | 936 | Protein_29 | IS66 family transposase ISEc22 | Transposase |
| HPE52_RS24340 () | 26218..26565 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| HPE52_RS24345 () | 26562..26966 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| HPE52_RS24350 () | 26995..27378 | - | 384 | Protein_32 | IS3 family transposase IS629 | Transposase |
| HPE52_RS24355 () | 27468..28673 | - | 1206 | Protein_33 | group II intron reverse transcriptase/maturase | - |
| HPE52_RS24360 () | 28726..29430 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HPE52_RS24365 () | 29868..31340 | - | 1473 | WP_000621194.1 | sensor histidine kinase | - |
| HPE52_RS24370 () | 31337..32059 | - | 723 | WP_001057737.1 | Transcriptional regulatory protein WalR | VF |
| HPE52_RS24375 () | 32201..32800 | + | 600 | WP_001177183.1 | cytochrome b/b6 domain-containing protein | - |
| HPE52_RS24380 () | 32811..33581 | + | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| HPE52_RS24385 () | 33611..33868 | + | 258 | WP_021579169.1 | hypothetical protein | - |
| HPE52_RS24390 () | 34018..34116 | - | 99 | WP_137491101.1 | transposase | - |
| HPE52_RS24395 () | 34309..34617 | + | 309 | Protein_41 | IS91 family transposase ISSbo1 | Transposase |
| HPE52_RS24400 () | 34732..34944 | - | 213 | WP_032155400.1 | hypothetical protein | - |
| HPE52_RS24405 () | 35643..36500 | - | 858 | WP_174165908.1 | incFII family plasmid replication initiator RepA | - |
| HPE52_RS24410 () | 36493..36567 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| HPE52_RS24415 () | 36800..37060 | - | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| HPE52_RS24420 () | 37300..37581 | - | 282 | Protein_46 | DUF2726 domain-containing protein | - |
| HPE52_RS24425 () | 37636..38849 | + | 1214 | WP_139371347.1 | IS3 family transposase IS629 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|