MGE detailed information
MGE type: Integron MGE length: 30568 bp
Accession: NZ_CP053745 Location: 338106..368673 Organism: Vibrio cholerae strain SA3G Replicon: chromosome
Accession: NZ_CP053745 Location: 338106..368673 Organism: Vibrio cholerae strain SA3G Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPY04_RS15080 () | 333425..334555 | + | 1131 | WP_175249389.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| HPY04_RS15085 () | 334848..336776 | + | 1929 | WP_001121779.1 | threonine--tRNA ligase | - |
| HPY04_RS15090 () | 336780..337331 | + | 552 | WP_001894072.1 | translation initiation factor IF-3 | - |
| HPY04_RS15095 () | 337435..337629 | + | 195 | WP_001885060.1 | 50S ribosomal protein L35 | - |
| HPY04_RS15100 () | 337671..338024 | + | 354 | WP_001138366.1 | 50S ribosomal protein L20 | - |
| HPY04_RS15105 () | 338106..339068 | - | 963 | WP_000841995.1 | IS91 family transposase ISAzo26 | Transposase |
| HPY04_RS15110 () | 339313..339828 | + | 516 | WP_069217449.1 | lipocalin family protein | - |
| HPY04_RS15115 () | 340422..340925 | + | 504 | WP_175249390.1 | DinB family protein | - |
| HPY04_RS15120 () | 341053..341499 | + | 447 | WP_175249391.1 | GNAT family N-acetyltransferase | - |
| HPY04_RS15125 () | 341850..341945 | + | 96 | WP_001907607.1 | DUF645 family protein | - |
| HPY04_RS15130 () | 342304..342483 | + | 180 | WP_175249662.1 | DUF645 family protein | - |
| HPY04_RS15135 () | 343081..343875 | + | 795 | WP_175249392.1 | hypothetical protein | - |
| HPY04_RS15140 () | 343893..343982 | + | 90 | WP_072036367.1 | DUF3265 domain-containing protein | - |
| HPY04_RS15145 () | 344017..344514 | + | 498 | WP_000259910.1 | GNAT family N-acetyltransferase | - |
| HPY04_RS15150 () | 344802..344984 | + | 183 | WP_000923184.1 | DUF645 family protein | - |
| HPY04_RS15155 () | 345201..345938 | + | 738 | WP_175249393.1 | Levodione reductase | VF |
| HPY04_RS15160 () | 346036..346407 | + | 372 | WP_001891306.1 | DUF4144 domain-containing protein | - |
| HPY04_RS15165 () | 346555..347067 | + | 513 | WP_069730860.1 | hypothetical protein | - |
| HPY04_RS15170 () | 347210..347725 | + | 516 | WP_069217449.1 | lipocalin family protein | - |
| HPY04_RS15175 () | 347934..348215 | + | 282 | WP_000086649.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY04_RS15180 () | 348212..348499 | + | 288 | WP_000869999.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY04_RS15185 () | 348650..349180 | + | 531 | WP_055034297.1 | hypothetical protein | - |
| HPY04_RS15190 () | 349482..349568 | + | 87 | WP_134820423.1 | DUF645 family protein | - |
| HPY04_RS15195 () | 349571..349660 | + | 90 | Protein_305 | DUF645 family protein | - |
| HPY04_RS15200 () | 349858..350604 | + | 747 | WP_033929253.1 | HNH endonuclease | - |
| HPY04_RS15205 () | 350968..351146 | + | 179 | Protein_307 | DUF645 family protein | - |
| HPY04_RS15210 () | 351337..351825 | + | 489 | WP_175249394.1 | GNAT family N-acetyltransferase | - |
| HPY04_RS15215 () | 351972..352724 | + | 753 | WP_175249395.1 | hypothetical protein | - |
| HPY04_RS15220 () | 352786..352848 | + | 63 | Protein_310 | acetyltransferase | - |
| HPY04_RS15225 () | 353274..353501 | + | 228 | WP_175249396.1 | hypothetical protein | - |
| HPY04_RS15230 () | 353656..354255 | + | 600 | WP_001891245.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| HPY04_RS15235 () | 354394..354876 | + | 483 | WP_095469236.1 | tetratricopeptide repeat protein | - |
| HPY04_RS15240 () | 355035..355475 | + | 441 | WP_095457934.1 | hypothetical protein | - |
| HPY04_RS15245 () | 355782..355963 | + | 182 | Protein_315 | DUF645 family protein | - |
| HPY04_RS15250 () | 356179..356778 | + | 600 | WP_046126216.1 | porin family protein | - |
| HPY04_RS15255 () | 357000..357242 | + | 243 | WP_033930503.1 | hypothetical protein | - |
| HPY04_RS15260 () | 357425..357976 | + | 552 | WP_175249397.1 | hypothetical protein | - |
| HPY04_RS15265 () | 358163..359662 | + | 1500 | WP_057563221.1 | RNA-directed DNA polymerase | - |
| HPY04_RS15270 () | 359890..360027 | + | 138 | WP_000757220.1 | YHYH domain-containing protein | - |
| HPY04_RS15275 () | 360270..360803 | + | 534 | WP_055032242.1 | cysteine hydrolase | - |
| HPY04_RS15280 () | 360866..360967 | + | 102 | WP_175249398.1 | acetyltransferase | - |
| HPY04_RS15285 () | 360957..361334 | + | 378 | WP_175249399.1 | VOC family protein | - |
| HPY04_RS15290 () | 361628..361756 | + | 129 | WP_088129246.1 | DUF645 family protein | - |
| HPY04_RS15295 () | 361772..361810 | + | 39 | WP_108244118.1 | hypothetical protein | - |
| HPY04_RS15300 () | 361989..362798 | + | 810 | WP_175249400.1 | hypothetical protein | - |
| HPY04_RS15305 () | 362717..362905 | + | 189 | WP_175249401.1 | DUF3265 domain-containing protein | - |
| HPY04_RS15310 () | 362949..363629 | + | 681 | WP_175249402.1 | hypothetical protein | - |
| HPY04_RS15315 () | 363848..364870 | + | 1023 | WP_175249403.1 | hypothetical protein | - |
| HPY04_RS15320 () | 364911..365393 | + | 483 | WP_001900268.1 | hypothetical protein | - |
| HPY04_RS15325 () | 365528..365845 | - | 318 | WP_001913968.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPY04_RS15330 () | 365864..366106 | - | 243 | WP_000557292.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HPY04_RS15335 () | 366321..366836 | + | 516 | WP_000090012.1 | hypothetical protein | - |
| HPY04_RS15340 () | 366992..367386 | + | 395 | Protein_334 | DUF3465 domain-containing protein | - |
| HPY04_RS15345 () | 367532..368191 | + | 660 | WP_071179796.1 | hypothetical protein | - |
| HPY04_RS15350 () | 368350..368673 | + | 324 | WP_175249404.1 | hypothetical protein | - |
| HPY04_RS15355 () | 368889..369482 | - | 594 | WP_057552378.1 | hypothetical protein | - |
| HPY04_RS15360 () | 369498..370403 | - | 906 | WP_175249405.1 | hypothetical protein | - |
| HPY04_RS15365 () | 370465..372072 | - | 1608 | WP_175249406.1 | hypothetical protein | - |
| HPY04_RS15370 () | 372079..372474 | - | 396 | WP_175249407.1 | hypothetical protein | - |
| HPY04_RS15375 () | 372453..372716 | - | 264 | WP_175249408.1 | hypothetical protein | - |
| HPY04_RS15380 () | 372819..373442 | - | 624 | WP_175249409.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|