MGE detailed information
MGE type: Conjugative plasmid MGE length: 70770 bp
Accession: NZ_CP053734 Location: 1..70770 Organism: Escherichia coli strain CP55_Sichuan Replicon: plasmid pCP55-IncFII
Accession: NZ_CP053734 Location: 1..70770 Organism: Escherichia coli strain CP55_Sichuan Replicon: plasmid pCP55-IncFII
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP431_RS25825 () | 1559..1699 | + | 141 | WP_001333237.1 | hypothetical protein | - |
| HP431_RS25830 () | 1797..2450 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HP431_RS25835 () | 2543..2800 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HP431_RS25840 () | 2733..3134 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HP431_RS25845 () | 3383..3514 | + | 132 | Protein_5 | IS1 family transposase | - |
| HP431_RS25850 () | 3794..4798 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| HP431_RS25855 () | 4877..5731 | - | 855 | Protein_7 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| HP431_RS25860 () | 6000..7625 | + | 1626 | WP_089613755.1 | Phosphoethanolamine transferase EptA | VF |
| HP431_RS25865 () | 7743..8123 | + | 381 | WP_039026395.1 | diacylglycerol kinase | - |
| HP431_RS25870 () | 8261..8964 | - | 704 | Protein_10 | IS6 family transposase IS15DI | Transposase |
| HP431_RS25875 () | 9139..9425 | + | 287 | Protein_11 | IS1 family transposase | - |
| HP431_RS25880 () | 9461..10004 | - | 544 | Protein_12 | Tn3 family transposase | - |
| HP431_RS25885 () | 10077..10771 | - | 695 | Protein_13 | IS6 family transposase IS26 | Transposase |
| HP431_RS25890 () | 10836..11714 | - | 879 | Protein_14 | MFS transporter | - |
| HP431_RS25895 () | 11711..12517 | - | 807 | Protein_15 | hypothetical protein | ARG |
| HP431_RS25900 () | 12572..13276 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HP431_RS25905 () | 13342..13407 | + | 66 | Protein_17 | hypothetical protein | - |
| HP431_RS25910 () | 14856..15090 | + | 235 | Protein_18 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HP431_RS25915 () | 15218..15499 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| HP431_RS25920 () | 15622..15972 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| HP431_RS25925 () | 15975..16937 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| HP431_RS25930 () | 17084..17377 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| HP431_RS25935 () | 17454..18137 | + | 684 | WP_000085883.1 | DNA methylase | - |
| HP431_RS25940 () | 18138..18359 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HP431_RS25945 () | 18373..18807 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| HP431_RS25950 () | 18858..19622 | + | 765 | Protein_26 | hypothetical protein | - |
| HP431_RS25955 () | 19507..20079 | + | 573 | WP_011161242.1 | YubH family protein | - |
| HP431_RS25960 () | 20175..20477 | + | 303 | WP_172615587.1 | antirestriction protein | - |
| HP431_RS25965 () | 20524..20946 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| HP431_RS25970 () | 20943..21134 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| HP431_RS25975 () | 22172..22402 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| HP431_RS25980 () | 22454..23815 | + | 1362 | WP_021538345.1 | DUF3560 domain-containing protein | - |
| HP431_RS25985 () | 23861..24424 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| HP431_RS25990 () | 24576..24854 | + | 279 | WP_072127934.1 | hypothetical protein | - |
| HP431_RS25995 () | 24905..25099 | + | 195 | WP_032175643.1 | hypothetical protein | - |
| HP431_RS26000 () | 25327..25854 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| HP431_RS26005 () | 25912..26145 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| HP431_RS26010 () | 26206..28229 | + | 2024 | Protein_38 | ParB/RepB/Spo0J family partition protein | - |
| HP431_RS26015 () | 28298..28732 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| HP431_RS26020 () | 28729..29448 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 29460..29684 | + | 225 | NuclAT_0 | - | - |
| - () | 29460..29684 | + | 225 | NuclAT_0 | - | - |
| - () | 29460..29684 | + | 225 | NuclAT_0 | - | - |
| - () | 29460..29684 | + | 225 | NuclAT_0 | - | - |
| HP431_RS26025 () | 29469..29648 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - () | 29617..29682 | + | 66 | - | - | Antitoxin Detail |
| HP431_RS26030 () | 29728..29886 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HP431_RS26035 () | 30364..30557 | + | 194 | Protein_43 | hypothetical protein | - |
| HP431_RS26040 () | 30783..31079 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| HP431_RS26045 () | 31190..32011 | + | 822 | WP_032237714.1 | DUF945 domain-containing protein | - |
| HP431_RS26050 () | 32308..32910 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| HP431_RS26055 () | 33233..33616 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| HP431_RS26060 () | 33810..34481 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| HP431_RS26065 () | 34618..34845 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| HP431_RS26070 () | 34878..35237 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| HP431_RS26075 () | 35252..35563 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| HP431_RS26080 () | 35585..36151 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| HP431_RS26085 () | 36138..36866 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| HP431_RS26090 () | 36866..38317 | + | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| HP431_RS26095 () | 38286..38873 | + | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| HP431_RS26100 () | 38812..39180 | + | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| HP431_RS26105 () | 39177..39692 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HP431_RS26110 () | 39827..40048 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| HP431_RS26115 () | 40041..40517 | + | 477 | WP_000549587.1 | hypothetical protein | - |
| HP431_RS26120 () | 40597..40815 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| HP431_RS26125 () | 40843..41190 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| HP431_RS26130 () | 41316..43946 | + | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| HP431_RS26135 () | 43943..44329 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| HP431_RS26140 () | 44326..44958 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| HP431_RS26145 () | 44955..45947 | + | 993 | WP_032237708.1 | conjugal transfer pilus assembly protein TraU | - |
| HP431_RS26150 () | 45977..46282 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| HP431_RS26155 () | 46291..46929 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HP431_RS26160 () | 46926..48776 | + | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HP431_RS26165 () | 48803..49060 | + | 258 | WP_044789554.1 | conjugal transfer protein TrbE | - |
| HP431_RS26170 () | 49053..49796 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HP431_RS26175 () | 49810..50154 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| HP431_RS26180 () | 50273..50557 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HP431_RS26185 () | 50544..51089 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HP431_RS26190 () | 51019..51366 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| HP431_RS26195 () | 51314..51739 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| HP431_RS26200 () | 51726..53099 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| HP431_RS26205 () | 53096..55918 | + | 2823 | WP_024220490.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HP431_RS26210 () | 55934..56419 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| HP431_RS26215 () | 56468..57199 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| HP431_RS26220 () | 57402..58139 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| HP431_RS26225 () | 58190..60424 | + | 2235 | WP_000009330.1 | type IV conjugative transfer system coupling protein TraD | - |
| HP431_RS26230 () | 60424..65694 | + | 5271 | WP_172615586.1 | Multifunctional conjugation protein TraI | Relaxase |
| HP431_RS26235 () | 65714..66460 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| HP431_RS26240 () | 66519..67379 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| HP431_RS26245 () | 67482..68042 | + | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| HP431_RS26250 () | 68171..68383 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| HP431_RS26255 () | 68628..69089 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| HP431_RS26260 () | 69135..69344 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| HP431_RS26265 () | 69382..69972 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| HP431_RS26270 () | 70212..70466 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|