MGE detailed information
MGE type: Conjugative plasmid MGE length: 141846 bp
Accession: NZ_CP053733 Location: 1..141846 Organism: Escherichia coli strain CP55_Sichuan Replicon: plasmid pCP55-141k
Accession: NZ_CP053733 Location: 1..141846 Organism: Escherichia coli strain CP55_Sichuan Replicon: plasmid pCP55-141k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP431_RS25045 () | 1..873 | + | 873 | WP_001536607.1 | incFII family plasmid replication initiator RepA | - |
| HP431_RS25050 () | 1833..2084 | + | 252 | WP_032331134.1 | antitoxin | Antitoxin Detail |
| HP431_RS25055 () | 2081..2368 | + | 288 | WP_032331135.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HP431_RS25060 () | 2472..3075 | + | 604 | Protein_3 | Serine acetyltransferase | VF |
| HP431_RS25065 () | 3267..3964 | + | 698 | Protein_4 | IS1 family transposase IS1X2 | Transposase |
| HP431_RS25070 () | 4220..5062 | + | 843 | WP_170969611.1 | polysaccharide deacetylase family protein | - |
| HP431_RS25075 () | 5065..6153 | + | 1089 | WP_072041713.1 | putative hexosyltransferase CapU | - |
| HP431_RS25080 () | 6158..7108 | + | 951 | WP_072041714.1 | virulence factor VirK | - |
| HP431_RS25085 () | 7173..8117 | + | 945 | WP_040208596.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| HP431_RS25090 () | 8179..8955 | - | 777 | Protein_9 | IS630 family transposase | - |
| HP431_RS25095 () | 9024..9570 | - | 547 | Protein_10 | IS1 family transposase | - |
| HP431_RS25100 () | 9616..10020 | + | 405 | Protein_11 | hypothetical protein | - |
| HP431_RS25105 () | 10088..10402 | + | 315 | WP_032331136.1 | hypothetical protein | - |
| HP431_RS25110 () | 10803..11669 | - | 867 | WP_001536599.1 | DMT family transporter | - |
| HP431_RS25115 () | 11662..12729 | - | 1068 | WP_170969594.1 | hypothetical protein | - |
| HP431_RS25120 () | 13384..14007 | + | 624 | WP_000904945.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| HP431_RS25125 () | 13988..16954 | + | 2967 | WP_172615568.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| HP431_RS25130 () | 17100..18092 | + | 993 | WP_136763385.1 | hypothetical protein | - |
| HP431_RS25135 () | 18151..18768 | - | 618 | WP_136763386.1 | proQ/FINO family protein | - |
| HP431_RS25140 () | 18958..20514 | - | 1557 | WP_032331137.1 | AAA family ATPase | - |
| HP431_RS25145 () | 20777..21367 | - | 591 | WP_032331138.1 | hypothetical protein | - |
| HP431_RS25150 () | 21367..21600 | - | 234 | WP_032280055.1 | hypothetical protein | - |
| HP431_RS25155 () | 21929..22381 | + | 453 | WP_000670960.1 | N-acetyltransferase | - |
| HP431_RS25160 () | 22413..23945 | - | 1533 | WP_032331140.1 | NAD(P)-binding domain-containing protein | - |
| HP431_RS25165 () | 23942..24211 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| HP431_RS25170 () | 24213..25229 | - | 1017 | WP_032280058.1 | Gfo/Idh/MocA family oxidoreductase | - |
| HP431_RS25175 () | 25232..26059 | - | 828 | WP_000154003.1 | HAD-IIB family hydrolase | - |
| HP431_RS25180 () | 26043..27281 | - | 1239 | WP_012006540.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| HP431_RS25185 () | 27850..29415 | + | 1566 | WP_000741348.1 | ATP-binding protein | - |
| HP431_RS25190 () | 29472..30341 | - | 870 | WP_000253407.1 | hypothetical protein | - |
| HP431_RS25195 () | 30343..31431 | - | 1089 | WP_000952231.1 | hypothetical protein | - |
| HP431_RS25200 () | 31729..32661 | - | 933 | WP_000991830.1 | hypothetical protein | - |
| HP431_RS25205 () | 32665..33660 | - | 996 | WP_000246635.1 | hypothetical protein | - |
| HP431_RS25210 () | 34366..34584 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HP431_RS25215 () | 34586..34891 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HP431_RS25220 () | 34892..35698 | + | 807 | WP_077255603.1 | site-specific integrase | - |
| HP431_RS25225 () | 35879..36523 | + | 645 | WP_001144036.1 | ParA family protein | - |
| HP431_RS25230 () | 36610..36918 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| HP431_RS25235 () | 37332..38312 | + | 981 | WP_032331146.1 | plasmid segregation protein ParM | - |
| HP431_RS25240 () | 38305..38721 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HP431_RS25245 () | 38723..39997 | - | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| HP431_RS25250 () | 39997..40434 | - | 438 | WP_032285024.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HP431_RS25255 () | 40431..40679 | - | 249 | WP_000619113.1 | DinI-like family protein | - |
| HP431_RS25260 () | 40980..41291 | + | 312 | WP_032147850.1 | hypothetical protein | - |
| HP431_RS25265 () | 41386..42288 | + | 903 | WP_172615583.1 | DUF1281 domain-containing protein | - |
| HP431_RS25270 () | 42292..42596 | + | 305 | Protein_45 | hypothetical protein | - |
| HP431_RS25275 () | 42673..43356 | + | 684 | WP_040208566.1 | DNA methylase | - |
| HP431_RS25280 () | 43357..43578 | + | 222 | WP_001104892.1 | hypothetical protein | - |
| HP431_RS25285 () | 43591..44025 | + | 435 | WP_032331153.1 | DUF1380 family protein | - |
| HP431_RS25290 () | 44044..44601 | + | 558 | Protein_49 | hypothetical protein | - |
| HP431_RS25295 () | 44486..45057 | + | 572 | Protein_50 | DUF1472 domain-containing protein | - |
| HP431_RS25300 () | 45153..45455 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| HP431_RS25305 () | 45502..45924 | + | 423 | WP_000271699.1 | DUF1380 family protein | - |
| HP431_RS25310 () | 45921..46112 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| HP431_RS25315 () | 46249..46530 | + | 282 | WP_172615569.1 | hypothetical protein | - |
| HP431_RS25320 () | 46882..47409 | + | 528 | WP_172615570.1 | single-stranded DNA-binding protein | - |
| HP431_RS25325 () | 47467..47700 | + | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| HP431_RS25330 () | 47759..49717 | + | 1959 | WP_172615571.1 | ParB/RepB/Spo0J family partition protein | - |
| HP431_RS25335 () | 49772..50206 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| HP431_RS25340 () | 50203..50922 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| HP431_RS25345 () | 50919..51515 | + | 597 | WP_040208620.1 | hypothetical protein | - |
| HP431_RS25350 () | 51587..52056 | + | 470 | Protein_61 | DUF1472 domain-containing protein | - |
| HP431_RS25355 () | 51977..52477 | + | 501 | WP_040208606.1 | antirestriction protein ArdA | - |
| HP431_RS25360 () | 53209..53643 | + | 435 | WP_000218864.1 | hypothetical protein | - |
| HP431_RS25365 () | 53736..54002 | + | 267 | WP_001546460.1 | hypothetical protein | - |
| HP431_RS25370 () | 54067..55017 | + | 951 | WP_032331164.1 | Recombination-promoting nuclease RpnA | VF |
| HP431_RS25375 () | 55017..55262 | + | 246 | WP_012605149.1 | hypothetical protein | - |
| HP431_RS25380 () | 55293..55544 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HP431_RS25385 () | 55578..55775 | - | 198 | WP_172615584.1 | hypothetical protein | - |
| HP431_RS25390 () | 56124..56972 | + | 849 | WP_172615572.1 | DUF4942 domain-containing protein | - |
| HP431_RS25395 () | 57057..57392 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HP431_RS25400 () | 57624..57956 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| HP431_RS25405 () | 57968..60679 | + | 2712 | WP_172615573.1 | Protein TraI | Relaxase |
| HP431_RS25410 () | 60747..61178 | + | 432 | WP_001335086.1 | hypothetical protein | - |
| HP431_RS25415 () | 61276..61506 | - | 231 | WP_071591569.1 | hypothetical protein | - |
| HP431_RS25420 () | 61973..64276 | - | 2304 | WP_172615574.1 | TraM recognition domain-containing protein | - |
| HP431_RS25425 () | 64257..65375 | - | 1119 | WP_170969603.1 | thioredoxin fold domain-containing protein | - |
| HP431_RS25430 () | 65372..66643 | - | 1272 | WP_170969604.1 | IncI1-type conjugal transfer protein TrbA | - |
| HP431_RS25435 () | 67059..67709 | + | 651 | WP_001536670.1 | IS66 family transposase IS679 | Transposase |
| HP431_RS25440 () | 67709..68056 | + | 348 | WP_001536669.1 | IS66 family transposase ISCro1 | Transposase |
| HP431_RS25445 () | 68076..69511 | + | 1436 | Protein_80 | IS66 family transposase ISCro1 | Transposase |
| HP431_RS25450 () | 70214..72262 | + | 2049 | WP_001536666.1 | TonB-dependent siderophore receptor IreA | - |
| HP431_RS25455 () | 72406..73613 | + | 1208 | Protein_82 | IS256 family transposase ISEc39 | Transposase |
| HP431_RS25460 () | 74121..74501 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| HP431_RS25465 () | 74498..74656 | + | 159 | WP_142905907.1 | IS66 family transposase ISEc8 | Transposase |
| HP431_RS25470 () | 74663..74845 | + | 183 | WP_077761304.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| HP431_RS25475 () | 74895..76433 | + | 1539 | WP_172615575.1 | IS66 family transposase ISEc8 | Transposase |
| HP431_RS25480 () | 76656..76847 | - | 192 | WP_000264909.1 | hypothetical protein | - |
| HP431_RS25485 () | 76857..77222 | - | 366 | WP_001536659.1 | hypothetical protein | - |
| HP431_RS25490 () | 77426..78322 | - | 897 | Protein_89 | IS3 family transposase ISSd1 | Transposase |
| HP431_RS25495 () | 78384..79535 | + | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| HP431_RS25500 () | 79545..79805 | - | 261 | Protein_91 | IS3 family transposase ISSfl10 | Transposase |
| HP431_RS25505 () | 79894..80055 | + | 162 | WP_172615576.1 | hypothetical protein | - |
| HP431_RS25510 () | 80217..84122 | - | 3906 | WP_062860766.1 | Serine protease EspP | VF |
| HP431_RS25520 () | 85814..86267 | - | 454 | Protein_95 | thermonuclease family protein | - |
| HP431_RS25525 () | 86429..87052 | + | 624 | WP_001536653.1 | hypothetical protein | - |
| HP431_RS25530 () | 87140..87595 | + | 456 | WP_172615578.1 | DUF2569 family protein | - |
| HP431_RS25535 () | 87795..89330 | + | 1536 | WP_001536640.1 | phosphoethanolamine transferase | - |
| HP431_RS25540 () | 89423..89665 | - | 243 | WP_000064387.1 | hypothetical protein | - |
| HP431_RS25545 () | 89997..90149 | + | 153 | WP_001536636.1 | Hok/Gef family protein | - |
| HP431_RS25550 () | 90146..90307 | - | 162 | WP_001138649.1 | hypothetical protein | - |
| HP431_RS25555 () | 90464..91108 | - | 645 | WP_172615579.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HP431_RS25560 () | 91199..93364 | - | 2166 | WP_137494570.1 | DotA/TraY family protein | - |
| HP431_RS25565 () | 93439..94008 | - | 570 | WP_021529219.1 | conjugal transfer protein TraX | - |
| HP431_RS25570 () | 94005..95210 | - | 1206 | WP_021529220.1 | conjugal transfer protein TraW | - |
| HP431_RS25575 () | 95171..95788 | - | 618 | WP_172615580.1 | conjugal transfer protein TraV | - |
| HP431_RS25580 () | 95788..98832 | - | 3045 | WP_021529221.1 | hypothetical protein | - |
| HP431_RS25585 () | 99367..99522 | - | 156 | Protein_108 | site-specific integrase | - |
| HP431_RS25590 () | 99642..100988 | - | 1347 | WP_032301578.1 | MFS transporter | - |
| HP431_RS25595 () | 101169..102781 | - | 1613 | Protein_110 | IS66 family transposase ISEc23 | Transposase |
| HP431_RS25600 () | 102812..103162 | - | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| HP431_RS25605 () | 103159..103584 | - | 426 | WP_001485287.1 | IS66 family transposase ISEc23 | Transposase |
| HP431_RS25610 () | 103727..104107 | - | 381 | WP_172615585.1 | hypothetical protein | - |
| HP431_RS25615 () | 104107..104466 | - | 360 | WP_162827361.1 | hypothetical protein | - |
| HP431_RS25620 () | 104521..105339 | - | 819 | WP_012605173.1 | hypothetical protein | - |
| HP431_RS25625 () | 105254..105505 | - | 252 | WP_012605174.1 | hypothetical protein | - |
| HP431_RS25630 () | 105562..105960 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| HP431_RS25635 () | 106007..106534 | - | 528 | WP_001388619.1 | conjugal transfer protein TraQ | - |
| HP431_RS25640 () | 106534..107247 | - | 714 | WP_032331806.1 | conjugal transfer protein TraP | - |
| HP431_RS25645 () | 107244..108581 | - | 1338 | WP_096122256.1 | conjugal transfer protein TraO | - |
| HP431_RS25650 () | 108585..109559 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| HP431_RS25655 () | 109570..110265 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| HP431_RS25660 () | 110277..110627 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| HP431_RS25665 () | 110644..114705 | - | 4062 | WP_172615581.1 | DNA primase | - |
| HP431_RS25670 () | 115059..115640 | - | 582 | WP_021561191.1 | hypothetical protein | - |
| HP431_RS25675 () | 115872..116162 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| HP431_RS25680 () | 116159..117307 | - | 1149 | WP_021565170.1 | putative protein YggR | VF |
| HP431_RS25685 () | 117291..118127 | - | 837 | WP_012605182.1 | hypothetical protein | VF |
| HP431_RS25690 () | 118124..118582 | - | 459 | WP_001681674.1 | DotD/TraH family lipoprotein | - |
| HP431_RS25695 () | 118686..119888 | - | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| HP431_RS25700 () | 119990..120811 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| HP431_RS25705 () | 121073..121411 | + | 339 | WP_001681677.1 | hypothetical protein | - |
| HP431_RS25710 () | 121698..122822 | - | 1125 | WP_042014175.1 | site-specific integrase | - |
| HP431_RS25715 () | 122886..123143 | + | 258 | Protein_134 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HP431_RS25720 () | 123149..124522 | - | 1374 | WP_042100569.1 | hypothetical protein | VF |
| HP431_RS25725 () | 124519..125169 | - | 651 | WP_001532121.1 | A24 family peptidase | - |
| HP431_RS25730 () | 125186..125668 | - | 483 | WP_032331127.1 | hypothetical protein | VF |
| HP431_RS25735 () | 125716..126249 | - | 534 | WP_136763406.1 | prepilin-type cleavage/methylation domain-containing protein | - |
| HP431_RS25740 () | 126301..127401 | - | 1101 | WP_001211427.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HP431_RS25745 () | 127403..128911 | - | 1509 | WP_000893939.1 | Type II secretion system protein E | VF |
| HP431_RS25750 () | 129008..129532 | - | 525 | WP_172615582.1 | hypothetical protein | - |
| HP431_RS25755 () | 129628..130182 | - | 555 | WP_001026779.1 | hypothetical protein | - |
| HP431_RS25760 () | 130231..130683 | - | 453 | WP_000543063.1 | hypothetical protein | VF |
| HP431_RS25765 () | 130673..131968 | - | 1296 | WP_025672403.1 | type 4b pilus protein PilO2 | - |
| HP431_RS25770 () | 131989..133608 | - | 1620 | WP_001034996.1 | Outer membrane lipoprotein BfpB | VF |
| HP431_RS25775 () | 133639..134076 | - | 438 | WP_021547660.1 | type IV pilus biogenesis protein PilM | - |
| HP431_RS25780 () | 134081..135151 | - | 1071 | WP_033804408.1 | hypothetical protein | VF |
| HP431_RS25785 () | 135253..135693 | + | 441 | WP_000468139.1 | hypothetical protein | - |
| HP431_RS25790 () | 135686..136573 | - | 888 | WP_042101662.1 | hypothetical protein | - |
| HP431_RS25795 () | 136766..137083 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| HP431_RS25800 () | 137089..138783 | - | 1695 | WP_000482666.1 | flotillin family protein | - |
| HP431_RS25805 () | 138810..139430 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| HP431_RS25810 () | 139697..140362 | - | 666 | WP_136769817.1 | traC | - |
| HP431_RS25815 () | 140503..141144 | - | 642 | WP_001681782.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|