MGE detailed information
MGE type: Conjugative plasmid MGE length: 156025 bp
Accession: NZ_CP053732 Location: 1..156025 Organism: Escherichia coli strain CP55_Sichuan Replicon: plasmid pCP55-IncFIB
Accession: NZ_CP053732 Location: 1..156025 Organism: Escherichia coli strain CP55_Sichuan Replicon: plasmid pCP55-IncFIB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HP431_RS24195 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| HP431_RS24200 () | 1263..2003 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| HP431_RS24205 () | 2124..2312 | - | 189 | WP_014640565.1 | hypothetical protein | - |
| HP431_RS24210 () | 2686..3588 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| HP431_RS24215 () | 3657..4766 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| HP431_RS24220 () | 5199..6152 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| HP431_RS24225 () | 7425..7583 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| HP431_RS24230 () | 7767..8980 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| HP431_RS24235 () | 9022..9327 | - | 306 | Protein_8 | ISNCY family transposase ISKpn21 | Transposase |
| HP431_RS24240 () | 9637..9786 | - | 150 | Protein_9 | IS3 family transposase IS2 | Transposase |
| HP431_RS24245 () | 9964..11157 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| HP431_RS24250 () | 12380..13616 | - | 1237 | Protein_11 | IS3 family transposase IS2 | Transposase |
| HP431_RS24255 () | 14243..14536 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| HP431_RS24260 () | 14594..14769 | - | 176 | Protein_13 | lysis protein | - |
| HP431_RS24265 () | 15347..16451 | + | 1105 | Protein_14 | IS481 family transposase ISKpn28 | Transposase |
| HP431_RS24270 () | 17687..18802 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| HP431_RS24275 () | 18942..22601 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| HP431_RS24280 () | 22705..23934 | + | 1230 | WP_172615565.1 | Enterochelin esterase | VF |
| HP431_RS24285 () | 24019..24975 | + | 957 | WP_000271276.1 | Ferri-bacillibactin esterase BesA | VF |
| HP431_RS24290 () | 25020..27197 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| HP431_RS24295 () | 28052..29086 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| HP431_RS24300 () | 29645..29992 | - | 348 | WP_000142437.1 | hypothetical protein | - |
| HP431_RS24305 () | 30294..30776 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| HP431_RS24310 () | 30893..31741 | - | 849 | WP_001058005.1 | 3'-5' exonuclease | - |
| HP431_RS24315 () | 31787..32068 | - | 282 | WP_000969990.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HP431_RS24320 () | 32065..32334 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HP431_RS24325 () | 32856..34092 | + | 1237 | Protein_26 | IS3 family transposase IS2 | Transposase |
| HP431_RS24330 () | 34289..35563 | + | 1275 | WP_000489607.1 | HlyD family secretion protein | - |
| HP431_RS24335 () | 35538..37652 | + | 2115 | WP_109045958.1 | peptidase domain-containing ABC transporter | - |
| HP431_RS24340 () | 37822..38133 | - | 312 | WP_001259758.1 | colicin V | - |
| HP431_RS24345 () | 38111..38347 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| HP431_RS24350 () | 38619..39731 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| HP431_RS24355 () | 40161..40442 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| HP431_RS24360 () | 40615..40782 | + | 168 | Protein_33 | colicin-B | - |
| HP431_RS24365 () | 40800..41327 | - | 528 | WP_113440680.1 | colicin B immunity protein | - |
| HP431_RS24370 () | 41571..42386 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| HP431_RS24375 () | 42436..42789 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| HP431_RS24380 () | 42967..43758 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| HP431_RS24385 () | 43755..44444 | - | 690 | WP_089583722.1 | hypothetical protein | - |
| HP431_RS24390 () | 44488..44838 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| HP431_RS24395 () | 45630..45920 | - | 291 | WP_000990619.1 | hypothetical protein | - |
| HP431_RS24400 () | 46219..47402 | - | 1184 | Protein_41 | IS3 family transposase ISEhe3 | Transposase |
| HP431_RS24405 () | 47579..51655 | + | 4077 | WP_112916244.1 | Serine protease SepA autotransporter | VF |
| HP431_RS24410 () | 51841..52608 | - | 768 | WP_001159649.1 | hypothetical protein | VF |
| HP431_RS24415 () | 52777..53391 | + | 615 | WP_000160640.1 | TIR domain-containing protein | - |
| HP431_RS24420 () | 53429..54139 | - | 711 | WP_001219114.1 | hypothetical protein | - |
| HP431_RS24425 () | 54167..54649 | - | 483 | WP_113440678.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HP431_RS24430 () | 54689..55393 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HP431_RS24435 () | 55457..56719 | - | 1263 | Protein_48 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HP431_RS24440 () | 56708..57115 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| HP431_RS24445 () | 57253..58137 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| HP431_RS24450 () | 58169..59368 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| HP431_RS24455 () | 59474..60124 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HP431_RS24460 () | 60156..60398 | - | 243 | WP_000844627.1 | transposase | - |
| HP431_RS24465 () | 60456..61970 | - | 1515 | Protein_54 | Tn3-like element TnAs1 family transposase | - |
| HP431_RS24470 () | 62036..62740 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HP431_RS24475 () | 62794..63108 | + | 315 | Protein_56 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| HP431_RS24480 () | 63111..66077 | + | 2967 | WP_001138070.1 | Tn3 family transposase | - |
| HP431_RS24485 () | 66156..67160 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| HP431_RS24490 () | 67342..67518 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| HP431_RS24495 () | 67848..68663 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| HP431_RS24500 () | 68724..69527 | + | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HP431_RS24505 () | 69527..70363 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| HP431_RS24510 () | 70594..71454 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HP431_RS24515 () | 71637..72194 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HP431_RS24520 () | 72358..72558 | + | 201 | Protein_65 | Tn3 family transposase ISEc63 | Transposase |
| HP431_RS24525 () | 72623..73327 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HP431_RS24530 () | 73393..73938 | + | 546 | Protein_67 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HP431_RS24535 () | 73974..74389 | - | 416 | Protein_68 | IS1 family transposase | - |
| HP431_RS24540 () | 74638..75039 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HP431_RS24545 () | 74972..75229 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HP431_RS24550 () | 75322..75975 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HP431_RS24555 () | 76073..76213 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| HP431_RS24560 () | 76913..77770 | - | 858 | WP_001425616.1 | incFII family plasmid replication initiator RepA | - |
| HP431_RS24565 () | 77763..77837 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| HP431_RS24570 () | 78073..78330 | - | 258 | WP_000083825.1 | replication regulatory protein RepA | - |
| HP431_RS24575 () | 79063..80172 | - | 1110 | WP_032237610.1 | N-acetylneuraminate epimerase | - |
| HP431_RS24580 () | 80182..80892 | - | 711 | WP_032237609.1 | N-acetylneuraminic acid channel protein | - |
| HP431_RS24585 () | 80946..81767 | - | 822 | WP_050487620.1 | alpha/beta hydrolase | - |
| HP431_RS24590 () | 81783..83249 | - | 1467 | WP_001307003.1 | MFS transporter | - |
| HP431_RS24595 () | 83320..84195 | - | 876 | WP_032237629.1 | N-acetylmannosamine kinase | - |
| HP431_RS24600 () | 84255..85154 | - | 900 | WP_032237628.1 | N-acetylneuraminate lyase | - |
| HP431_RS24605 () | 85290..86333 | - | 1044 | WP_050487621.1 | hypothetical protein | - |
| HP431_RS24610 () | 86445..87173 | + | 729 | WP_032237608.1 | transcriptional regulator NanR | - |
| HP431_RS24615 () | 87192..88076 | - | 885 | WP_032237607.1 | alpha/beta hydrolase | - |
| HP431_RS24620 () | 88595..88807 | - | 213 | WP_172615566.1 | hypothetical protein | - |
| HP431_RS24625 () | 88939..89499 | - | 561 | WP_032237605.1 | fertility inhibition protein FinO | - |
| HP431_RS24630 () | 89554..90300 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| HP431_RS24635 () | 90320..95590 | - | 5271 | WP_172615567.1 | Multifunctional conjugation protein TraI | Relaxase |
| HP431_RS24640 () | 95590..97842 | - | 2253 | WP_032267844.1 | type IV conjugative transfer system coupling protein TraD | - |
| HP431_RS24645 () | 97893..98630 | - | 738 | WP_032246346.1 | hypothetical protein | - |
| HP431_RS24650 () | 98833..99564 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| HP431_RS24655 () | 99578..100087 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| HP431_RS24660 () | 100084..102909 | - | 2826 | WP_032246347.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HP431_RS24665 () | 102906..104279 | - | 1374 | WP_032237715.1 | conjugal transfer protein TraH | - |
| HP431_RS24670 () | 104266..104691 | - | 426 | WP_071781062.1 | F-type conjugal transfer protein TrbF | - |
| HP431_RS24675 () | 104639..104986 | - | 348 | WP_044789557.1 | P-type conjugative transfer protein TrbJ | - |
| HP431_RS24680 () | 104916..105461 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HP431_RS24685 () | 105448..105732 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HP431_RS24690 () | 105813..106148 | + | 336 | Protein_99 | toxin ArtA | - |
| HP431_RS24695 () | 106129..106470 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| HP431_RS24700 () | 106484..107227 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HP431_RS24705 () | 107220..107477 | - | 258 | WP_044789554.1 | conjugal transfer protein TrbE | - |
| HP431_RS24710 () | 107504..109354 | - | 1851 | WP_032237707.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HP431_RS24715 () | 109351..109773 | - | 423 | WP_001229309.1 | HNH endonuclease | - |
| HP431_RS24720 () | 109798..110169 | - | 372 | WP_000174465.1 | hypothetical protein | - |
| HP431_RS24725 () | 110166..110804 | - | 639 | WP_000087539.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HP431_RS24730 () | 110831..111349 | - | 519 | WP_000009088.1 | hypothetical protein | - |
| HP431_RS24735 () | 111412..111720 | - | 309 | WP_000412445.1 | hypothetical protein | - |
| HP431_RS24740 () | 111747..112739 | - | 993 | WP_032237708.1 | conjugal transfer pilus assembly protein TraU | - |
| HP431_RS24745 () | 112736..113368 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| HP431_RS24750 () | 113365..113751 | - | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| HP431_RS24755 () | 113748..116378 | - | 2631 | WP_000069763.1 | type IV secretion system protein TraC | - |
| HP431_RS24760 () | 116510..116857 | - | 348 | WP_032237709.1 | hypothetical protein | - |
| HP431_RS24765 () | 117179..117655 | - | 477 | WP_000549582.1 | hypothetical protein | - |
| HP431_RS24770 () | 117648..117869 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| HP431_RS24775 () | 118004..118519 | - | 516 | WP_032237710.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HP431_RS24780 () | 118516..118878 | - | 363 | WP_071829612.1 | conjugal transfer protein TrbD | - |
| HP431_RS24785 () | 118817..119407 | - | 591 | WP_032237712.1 | conjugal transfer protein TraP | - |
| HP431_RS24790 () | 119397..120824 | - | 1428 | WP_032178523.1 | conjugal transfer protein TraB | - |
| HP431_RS24795 () | 120824..121528 | - | 705 | WP_148935214.1 | type-F conjugative transfer system secretin TraK | - |
| HP431_RS24800 () | 121539..122105 | - | 567 | WP_032237713.1 | type IV conjugative transfer system protein TraE | - |
| HP431_RS24805 () | 122127..122438 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HP431_RS24810 () | 122453..122812 | - | 360 | WP_019842162.1 | type IV conjugative transfer system pilin TraA | - |
| HP431_RS24815 () | 122846..123073 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| HP431_RS24820 () | 123167..123853 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| HP431_RS24825 () | 124047..124430 | - | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| HP431_RS24830 () | 124716..125363 | + | 648 | WP_122999502.1 | hypothetical protein | VF |
| HP431_RS24835 () | 125660..126481 | - | 822 | WP_032237714.1 | DUF945 domain-containing protein | - |
| HP431_RS24840 () | 126592..126888 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| HP431_RS24845 () | 127114..127307 | - | 194 | Protein_130 | hypothetical protein | - |
| HP431_RS24850 () | 127785..127943 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 127987..128211 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 127987..128211 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 127987..128211 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 127987..128211 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| HP431_RS24855 () | 128023..128202 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| HP431_RS24860 () | 128223..128942 | - | 720 | WP_021526634.1 | plasmid SOS inhibition protein A | - |
| HP431_RS24865 () | 128939..129373 | - | 435 | WP_032238009.1 | conjugation system SOS inhibitor PsiB | - |
| HP431_RS24870 () | 129428..131386 | - | 1959 | WP_032238008.1 | ParB/RepB/Spo0J family partition protein | - |
| HP431_RS24875 () | 131445..131678 | - | 234 | WP_032188375.1 | DUF905 domain-containing protein | - |
| HP431_RS24880 () | 131736..132263 | - | 528 | WP_136747970.1 | single-stranded DNA-binding protein | - |
| HP431_RS24885 () | 132491..132685 | - | 195 | WP_032175643.1 | hypothetical protein | - |
| HP431_RS24890 () | 132736..133014 | - | 279 | WP_072127934.1 | hypothetical protein | - |
| HP431_RS24895 () | 133166..133729 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| HP431_RS24900 () | 133775..135136 | - | 1362 | WP_021538345.1 | DUF3560 domain-containing protein | - |
| HP431_RS24905 () | 135188..135418 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| HP431_RS24910 () | 136412..136594 | - | 183 | WP_113440889.1 | hypothetical protein | - |
| HP431_RS24915 () | 136594..137055 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| HP431_RS24920 () | 137055..137357 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| HP431_RS24925 () | 137453..137709 | - | 257 | Protein_146 | DUF1472 domain-containing protein | - |
| HP431_RS24930 () | 137882..138853 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| HP431_RS24935 () | 139114..139326 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| HP431_RS24940 () | 139339..139596 | - | 258 | Protein_149 | hypothetical protein | - |
| HP431_RS24945 () | 139608..140305 | - | 698 | Protein_150 | IS1 family transposase | - |
| HP431_RS24950 () | 140362..140670 | - | 309 | Protein_151 | hypothetical protein | - |
| HP431_RS24955 () | 140896..141108 | - | 213 | Protein_152 | DUF1472 domain-containing protein | - |
| HP431_RS24960 () | 141846..142817 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HP431_RS24965 () | 142817..143983 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| HP431_RS24970 () | 144283..144980 | - | 698 | Protein_155 | IS1 family transposase IS1G | Transposase |
| HP431_RS24975 () | 145136..146638 | - | 1503 | WP_000715078.1 | hypothetical protein | - |
| HP431_RS24980 () | 147265..147714 | - | 450 | WP_000238252.1 | hypothetical protein | - |
| HP431_RS24985 () | 147832..148311 | + | 480 | WP_039052483.1 | hypothetical protein | - |
| HP431_RS24990 () | 148751..148978 | + | 228 | Protein_159 | malate dehydrogenase | - |
| HP431_RS24995 () | 148975..149106 | - | 132 | Protein_160 | phosphopyruvate hydratase | - |
| HP431_RS25000 () | 149104..149361 | + | 258 | Protein_161 | Tn3 family transposase | - |
| HP431_RS25005 () | 149595..150452 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| HP431_RS25010 () | 150449..151306 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| HP431_RS25015 () | 151303..152130 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| HP431_RS25020 () | 152130..153044 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| HP431_RS25025 () | 153400..154097 | + | 698 | Protein_166 | IS1 family transposase | - |
| HP431_RS25030 () | 154277..154790 | - | 514 | Protein_167 | DUF4113 domain-containing protein | - |
| HP431_RS25035 () | 154851..154955 | - | 105 | Protein_168 | AAA family ATPase | - |
| HP431_RS25040 () | 154957..155280 | - | 324 | Protein_169 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|