MGE detailed information
MGE type: Prophage MGE length: 48404 bp
Accession: NZ_CP053634 Location: 1236993..1285396 Organism: Staphylococcus aureus strain 14638 Replicon: chromosome
Accession: NZ_CP053634 Location: 1236993..1285396 Organism: Staphylococcus aureus strain 14638 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HA038_RS06145 () | 1232769..1233410 | + | 642 | WP_000192949.1 | YigZ family protein | - |
| HA038_RS06150 () | 1233575..1234630 | - | 1056 | WP_000258150.1 | undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase | - |
| HA038_RS06155 () | 1234948..1236018 | + | 1071 | WP_000460983.1 | GGDEF domain-containing protein | - |
| HA038_RS06160 () | 1236214..1236975 | + | 762 | WP_001113406.1 | threonine/serine exporter ThrE family protein | - |
| HA038_RS06165 () | 1236993..1237487 | + | 495 | WP_000899890.1 | threonine/serine exporter family protein | - |
| HA038_RS06170 () | 1237501..1238727 | + | 1227 | WP_000795811.1 | peptidase T | - |
| HA038_RS06175 () | 1239609..1241063 | - | 1455 | WP_064131672.1 | N-acetylmuramoyl-L-alanine amidase | - |
| HA038_RS06180 () | 1241075..1241377 | - | 303 | WP_000339146.1 | phage holin | - |
| HA038_RS06185 () | 1241513..1241812 | - | 300 | WP_173863683.1 | DUF2951 family protein | - |
| HA038_RS06190 () | 1241858..1242022 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| HA038_RS06195 () | 1242015..1242404 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| HA038_RS06200 () | 1242404..1243870 | - | 1467 | WP_000067123.1 | BppU family phage baseplate upper protein | - |
| HA038_RS06205 () | 1243870..1245780 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| HA038_RS06210 () | 1245796..1246086 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| HA038_RS06215 () | 1246086..1247669 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| HA038_RS06220 () | 1247678..1248502 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| HA038_RS06225 () | 1248502..1254702 | - | 6201 | WP_173863684.1 | phage tail tape measure protein | - |
| HA038_RS06230 () | 1254716..1254874 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| HA038_RS06235 () | 1254916..1255266 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| HA038_RS06240 () | 1255324..1255779 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| HA038_RS06245 () | 1255871..1256512 | - | 642 | WP_000807536.1 | tail protein | - |
| HA038_RS06250 () | 1256547..1256942 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| HA038_RS06255 () | 1256943..1257344 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| HA038_RS06260 () | 1257341..1257673 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| HA038_RS06265 () | 1257685..1257963 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| HA038_RS06270 () | 1258032..1259195 | - | 1164 | WP_001142739.1 | phage major capsid protein | - |
| HA038_RS06275 () | 1259207..1259980 | - | 774 | WP_000061872.1 | Clp protease ClpP | - |
| HA038_RS06280 () | 1259964..1261202 | - | 1239 | WP_001100660.1 | phage portal protein | - |
| HA038_RS06285 () | 1261207..1262898 | - | 1692 | WP_000152858.1 | terminase large subunit | - |
| HA038_RS06290 () | 1262888..1263193 | - | 306 | WP_000778935.1 | P27 family phage terminase small subunit | - |
| HA038_RS06295 () | 1263318..1263638 | - | 321 | WP_000166884.1 | HNH endonuclease | - |
| HA038_RS06300 () | 1263795..1264232 | - | 438 | WP_031795556.1 | transcriptional regulator | - |
| HA038_RS06305 () | 1264245..1265612 | - | 1368 | WP_001795330.1 | DEAD/DEAH box helicase | - |
| HA038_RS06310 () | 1265593..1265883 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| HA038_RS06315 () | 1266017..1266121 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| HA038_RS06320 () | 1266224..1268671 | - | 2448 | WP_000884860.1 | virulence-associated E family protein | - |
| HA038_RS06325 () | 1268724..1268924 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| HA038_RS06330 () | 1268992..1269144 | - | 153 | WP_000595269.1 | transcriptional activator RinB | - |
| HA038_RS06335 () | 1269141..1269530 | - | 390 | WP_001596346.1 | hypothetical protein | - |
| HA038_RS06340 () | 1269520..1269756 | - | 237 | WP_000608283.1 | hypothetical protein | - |
| HA038_RS06345 () | 1269749..1269952 | - | 204 | WP_000141259.1 | hypothetical protein | - |
| HA038_RS06350 () | 1269949..1270155 | - | 207 | WP_000195832.1 | DUF1381 domain-containing protein | - |
| HA038_RS06355 () | 1270192..1270728 | - | 537 | WP_001066454.1 | dUTPase | - |
| HA038_RS06360 () | 1270721..1270891 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| HA038_RS06365 () | 1270878..1271132 | - | 255 | WP_001065104.1 | DUF1024 family protein | - |
| HA038_RS06370 () | 1271125..1271433 | - | 309 | WP_000144698.1 | hypothetical protein | - |
| HA038_RS06375 () | 1271430..1271777 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| HA038_RS06380 () | 1271774..1272178 | - | 405 | WP_000695753.1 | hypothetical protein | - |
| HA038_RS06385 () | 1272181..1272387 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| HA038_RS06390 () | 1272401..1272649 | - | 249 | WP_060474161.1 | hypothetical protein | - |
| HA038_RS06395 () | 1272649..1272903 | - | 255 | WP_000022719.1 | DUF3310 domain-containing protein | - |
| HA038_RS06400 () | 1272903..1273304 | - | 402 | WP_000113944.1 | PVL family protein | - |
| HA038_RS06405 () | 1273304..1273489 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| HA038_RS06410 () | 1273502..1275454 | - | 1953 | WP_075339477.1 | DNA polymerase | - |
| HA038_RS06415 () | 1275523..1276080 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| HA038_RS06420 () | 1276106..1277272 | - | 1167 | WP_105799089.1 | DUF2800 domain-containing protein | - |
| HA038_RS06425 () | 1277269..1277631 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| HA038_RS06430 () | 1277646..1277969 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| HA038_RS06435 () | 1278048..1278209 | - | 162 | WP_001285948.1 | DUF1270 domain-containing protein | - |
| HA038_RS06440 () | 1278222..1278485 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| HA038_RS06445 () | 1278512..1278727 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| HA038_RS06450 () | 1278782..1279147 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| HA038_RS06455 () | 1279116..1279361 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| HA038_RS06460 () | 1279428..1279808 | + | 381 | WP_000773059.1 | DUF2513 domain-containing protein | - |
| HA038_RS06465 () | 1279795..1279992 | - | 198 | WP_001148860.1 | hypothetical protein | - |
| HA038_RS06470 () | 1280062..1280274 | + | 213 | WP_000362644.1 | hypothetical protein | - |
| HA038_RS06475 () | 1280315..1280464 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| HA038_RS06480 () | 1280493..1281269 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| HA038_RS06485 () | 1281283..1281519 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| HA038_RS06490 () | 1281671..1281985 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| HA038_RS06495 () | 1281998..1282459 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| HA038_RS06500 () | 1282487..1282708 | + | 222 | Protein_1254 | membrane lipoprotein lipid attachment site-containing protein | - |
| HA038_RS06505 () | 1283002..1283886 | + | 885 | WP_001025527.1 | hypothetical protein | - |
| HA038_RS06510 () | 1284191..1285396 | + | 1206 | WP_000264751.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| HA038_RS06515 () | 1285546..1286670 | - | 1125 | WP_000866737.1 | glycerate kinase | - |
| HA038_RS06520 () | 1287094..1287414 | - | 321 | WP_000985617.1 | bacillithiol system redox-active protein YtxJ | - |
| HA038_RS06525 () | 1287568..1288446 | - | 879 | WP_000724887.1 | EMYY motif lipoprotein | - |
| HA038_RS06530 () | 1288566..1289084 | + | 519 | WP_000287207.1 | GrpB family protein | - |
| HA038_RS06535 () | 1289211..1290134 | + | 924 | WP_000608433.1 | UDP-N-acetylmuramate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|