MGE detailed information
MGE type: Prophage MGE length: 29167 bp
Accession: NZ_CP053627 Location: 1447227..1476393 Organism: Xylella taiwanensis strain PLS229 Replicon: chromosome
Accession: NZ_CP053627 Location: 1447227..1476393 Organism: Xylella taiwanensis strain PLS229 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PLS229_RS06240 () | 1444159..1446309 | + | 2151 | WP_038272467.1 | S46 family peptidase | - |
| PLS229_RS06245 () | 1446416..1447060 | + | 645 | WP_038272466.1 | histidine phosphatase family protein | - |
| PLS229_RS06250 () | 1447227..1447571 | + | 345 | WP_038272464.1 | hypothetical protein | - |
| PLS229_RS06255 () | 1447634..1448050 | - | 417 | WP_038272463.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PLS229_RS06260 () | 1448047..1448319 | - | 273 | WP_038272460.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| PLS229_RS06265 () | 1448409..1449536 | - | 1128 | WP_114867127.1 | hypothetical protein | - |
| PLS229_RS06270 () | 1449549..1449893 | - | 345 | WP_038273069.1 | DUF2523 domain-containing protein | - |
| PLS229_RS06275 () | 1449896..1451365 | - | 1470 | Protein_1215 | hypothetical protein | - |
| PLS229_RS06280 () | 1451461..1451685 | - | 225 | WP_081755494.1 | hypothetical protein | - |
| PLS229_RS06285 () | 1451706..1451912 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| PLS229_RS06290 () | 1451915..1452232 | - | 318 | WP_051482395.1 | hypothetical protein | - |
| PLS229_RS06295 () | 1452505..1453092 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| PLS229_RS06300 () | 1453289..1453432 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| PLS229_RS06305 () | 1453552..1453752 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| PLS229_RS06310 () | 1453801..1454064 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| PLS229_RS06315 () | 1454068..1454229 | - | 162 | WP_160165182.1 | hypothetical protein | - |
| PLS229_RS06320 () | 1454318..1454785 | + | 468 | WP_162814096.1 | helix-turn-helix domain-containing protein | - |
| PLS229_RS06325 () | 1454844..1455188 | + | 345 | WP_038272511.1 | hypothetical protein | - |
| PLS229_RS06330 () | 1455224..1455496 | - | 273 | WP_038272512.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| PLS229_RS06335 () | 1455496..1455756 | - | 261 | WP_038272513.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PLS229_RS06340 () | 1455845..1456972 | - | 1128 | WP_114867127.1 | hypothetical protein | - |
| PLS229_RS06345 () | 1456985..1457329 | - | 345 | WP_038273069.1 | DUF2523 domain-containing protein | - |
| PLS229_RS06350 () | 1457332..1458801 | - | 1470 | Protein_1230 | hypothetical protein | - |
| PLS229_RS06355 () | 1458897..1459121 | - | 225 | WP_081755494.1 | hypothetical protein | - |
| PLS229_RS06360 () | 1459142..1459348 | - | 207 | WP_038273075.1 | hypothetical protein | - |
| PLS229_RS06365 () | 1459351..1459668 | - | 318 | WP_051482395.1 | hypothetical protein | - |
| PLS229_RS06370 () | 1459941..1460528 | - | 588 | WP_038273076.1 | hypothetical protein | - |
| PLS229_RS06375 () | 1460725..1460868 | - | 144 | WP_160165233.1 | hypothetical protein | - |
| PLS229_RS06380 () | 1460988..1461188 | - | 201 | WP_038273077.1 | hypothetical protein | - |
| PLS229_RS06385 () | 1461237..1461500 | - | 264 | WP_162814095.1 | hypothetical protein | - |
| PLS229_RS06390 () | 1461504..1461665 | - | 162 | WP_160165236.1 | hypothetical protein | - |
| PLS229_RS06395 () | 1461808..1462284 | + | 477 | WP_152536672.1 | DUF3693 domain-containing protein | - |
| PLS229_RS06400 () | 1462195..1463035 | - | 841 | Protein_1240 | site-specific integrase | - |
| PLS229_RS06405 () | 1463321..1463542 | + | 222 | WP_038273164.1 | antitoxin MazE family protein | Antitoxin Detail |
| PLS229_RS06410 () | 1463539..1463862 | + | 324 | WP_038273166.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| PLS229_RS06415 () | 1463963..1465111 | - | 1149 | WP_069636227.1 | hypothetical protein | - |
| PLS229_RS06420 () | 1465111..1465452 | - | 342 | WP_038273089.1 | DUF2523 domain-containing protein | - |
| PLS229_RS06425 () | 1465456..1466523 | - | 1068 | WP_152536670.1 | hypothetical protein | - |
| PLS229_RS06430 () | 1466991..1467209 | - | 219 | WP_051482398.1 | phage coat protein | - |
| PLS229_RS06435 () | 1467218..1467424 | - | 207 | WP_038273092.1 | hypothetical protein | - |
| PLS229_RS06440 () | 1467427..1467720 | - | 294 | WP_038273093.1 | hypothetical protein | - |
| PLS229_RS06445 () | 1467766..1468914 | - | 1149 | WP_038273097.1 | replication initiation factor domain-containing protein | - |
| PLS229_RS06450 () | 1469345..1469527 | - | 183 | WP_114867130.1 | hypothetical protein | - |
| PLS229_RS06455 () | 1469558..1469818 | - | 261 | WP_152536640.1 | hypothetical protein | - |
| PLS229_RS06460 () | 1469962..1470270 | + | 309 | Protein_1252 | hypothetical protein | - |
| PLS229_RS06470 () | 1470429..1471097 | - | 669 | WP_038271631.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| PLS229_RS06475 () | 1471952..1473721 | + | 1770 | WP_038271663.1 | aspartate--tRNA ligase | - |
| PLS229_RS06480 () | 1474043..1474870 | - | 828 | WP_038271629.1 | SDR family oxidoreductase | - |
| PLS229_RS06485 () | 1475015..1475364 | + | 350 | Protein_1256 | recombinase family protein | - |
| PLS229_RS06490 () | 1475334..1476513 | + | 1180 | Protein_1257 | Tn3 family transposase | - |
| PLS229_RS06495 () | 1476557..1478074 | - | 1518 | WP_038271625.1 | fumarate hydratase | - |
| PLS229_RS06500 () | 1478085..1478330 | - | 246 | WP_038271623.1 | hypothetical protein | - |
| PLS229_RS06505 () | 1479396..1480979 | - | 1584 | WP_038271621.1 | peptidase S41 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|