MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 124247 bp
Accession: NZ_CP053580 Location: 1..124247 Organism: Salmonella enterica strain 94-0093 Replicon: plasmid unnamed
Accession: NZ_CP053580 Location: 1..124247 Organism: Salmonella enterica strain 94-0093 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPG92_RS00005 () | 43..506 | - | 464 | Protein_0 | DUF4113 domain-containing protein | - |
| HPG92_RS00010 () | 591..1608 | + | 1018 | Protein_1 | IS21 family transposase | - |
| HPG92_RS00015 () | 1608..2379 | + | 772 | Protein_2 | AAA family ATPase | - |
| HPG92_RS00020 () | 2446..2739 | - | 294 | Protein_3 | helix-turn-helix domain-containing protein | - |
| HPG92_RS00025 () | 3056..3412 | - | 357 | Protein_4 | GntP family permease | - |
| HPG92_RS00030 () | 4546..6837 | + | 2292 | WP_171773976.1 | inverse autotransporter beta domain-containing protein | - |
| HPG92_RS00035 () | 6851..7045 | - | 195 | Protein_6 | IS3 family transposase | - |
| HPG92_RS00040 () | 7049..9163 | + | 2115 | Protein_7 | type IV conjugative transfer system coupling protein TraD | - |
| HPG92_RS00045 () | 9163..14460 | + | 5298 | Protein_8 | conjugative transfer relaxase/helicase TraI | - |
| HPG92_RS00050 () | 14479..15045 | + | 567 | WP_171773977.1 | DUF2726 domain-containing protein | - |
| HPG92_RS00055 () | 15042..15773 | + | 732 | WP_171773978.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| HPG92_RS00060 () | 15815..16156 | + | 342 | WP_171773979.1 | hypothetical protein | - |
| HPG92_RS00065 () | 16305..16856 | + | 552 | WP_171773980.1 | phospholipase D family protein | - |
| HPG92_RS00070 () | 16988..17230 | + | 243 | WP_171773981.1 | replication regulatory protein RepA | - |
| HPG92_RS00075 () | 17462..17539 | + | 78 | WP_071530466.1 | RepA leader peptide Tap | - |
| HPG92_RS00080 () | 17532..18473 | + | 942 | WP_171773982.1 | replication initiator protein RepA | - |
| HPG92_RS00085 () | 19684..20114 | - | 431 | Protein_16 | Tn3 family transposase | - |
| HPG92_RS00090 () | 20178..20339 | + | 162 | Protein_17 | 5'-nucleotidase, lipoprotein e(P4) family | - |
| HPG92_RS00095 () | 20465..21163 | - | 699 | WP_171773983.1 | lactate utilization protein C | - |
| HPG92_RS00100 () | 21168..22583 | - | 1416 | WP_171773984.1 | iron-sulfur cluster-binding protein | - |
| HPG92_RS00105 () | 22594..23313 | - | 720 | WP_171773985.1 | (Fe-S)-binding protein | - |
| HPG92_RS00110 () | 23363..24919 | - | 1557 | WP_171773986.1 | lactate permease LctP family transporter | - |
| HPG92_RS00115 () | 26185..27137 | - | 953 | Protein_22 | Tn3 family transposase | - |
| HPG92_RS00120 () | 27142..27528 | - | 387 | Protein_23 | recombinase family protein | - |
| HPG92_RS00125 () | 27864..28016 | + | 153 | Protein_24 | Tn3 family transposase | - |
| HPG92_RS00130 () | 28089..31090 | + | 3002 | Protein_25 | Tn3 family transposase | - |
| HPG92_RS00135 () | 31429..34641 | + | 3213 | WP_171773987.1 | molybdopterin-dependent oxidoreductase | - |
| HPG92_RS00140 () | 34654..35112 | + | 459 | WP_004103181.1 | (2Fe-2S)-binding protein | - |
| HPG92_RS00145 () | 35178..35783 | + | 606 | WP_032728392.1 | CTP--molybdopterin cytidylyltransferase | - |
| HPG92_RS00150 () | 35858..38005 | - | 2148 | WP_171773988.1 | formate dehydrogenase subunit alpha | - |
| HPG92_RS00155 () | 38139..39614 | - | 1476 | WP_171773989.1 | purine/pyrimidine permease | - |
| HPG92_RS00160 () | 40125..42065 | + | 1941 | WP_171773990.1 | formate-dependent uric acid utilization protein YgfT | - |
| HPG92_RS00165 () | 42062..42538 | + | 477 | WP_004103174.1 | 4Fe-4S dicluster domain-containing protein | - |
| HPG92_RS00170 () | 42636..43967 | - | 1332 | WP_164852917.1 | putative aminohydrolase SsnA | - |
| HPG92_RS00175 () | 43970..47074 | - | 3105 | WP_171773991.1 | putative selenate reductase subunit YgfK | - |
| HPG92_RS00180 () | 47606..48439 | + | 834 | WP_171773992.1 | XdhC family protein | - |
| HPG92_RS00185 () | 48490..49422 | - | 933 | WP_004103169.1 | carbamate kinase | - |
| HPG92_RS00190 () | 49436..50842 | - | 1407 | WP_004103167.1 | dihydropyrimidinase | - |
| HPG92_RS00195 () | 50893..52104 | - | 1212 | WP_171773993.1 | YgeY family selenium metabolism-linked hydrolase | - |
| HPG92_RS00200 () | 52168..53367 | - | 1200 | WP_171773994.1 | diaminopropionate ammonia-lyase | - |
| HPG92_RS00205 () | 53429..54616 | - | 1188 | WP_004103164.1 | knotted carbamoyltransferase YgeW | - |
| HPG92_RS00210 () | 55105..56883 | + | 1779 | WP_171773995.1 | sigma-54-dependent Fis family transcriptional regulator | - |
| HPG92_RS00215 () | 56955..57656 | + | 702 | Protein_42 | IS6 family transposase | - |
| HPG92_RS00220 () | 57809..58066 | + | 258 | WP_114047722.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| HPG92_RS00225 () | 58066..58518 | + | 453 | WP_171773996.1 | PIN domain-containing protein | - |
| HPG92_RS00230 () | 58703..59029 | - | 327 | Protein_45 | recombinase family protein | - |
| HPG92_RS00235 () | 59071..59466 | - | 396 | WP_171773997.1 | recombinase family protein | - |
| HPG92_RS00240 () | 59539..59658 | - | 120 | WP_171773998.1 | helix-turn-helix domain-containing protein | - |
| HPG92_RS00245 () | 59611..59898 | + | 288 | Protein_48 | IS630 family transposase | - |
| HPG92_RS00250 () | 59879..60325 | + | 447 | WP_171773999.1 | recombinase family protein | - |
| HPG92_RS00255 () | 60421..61588 | - | 1168 | Protein_50 | IS3 family transposase | - |
| HPG92_RS00260 () | 61658..62541 | - | 884 | Protein_51 | GNAT family N-acetyltransferase | - |
| HPG92_RS00265 () | 62538..63839 | - | 1302 | WP_171774000.1 | phenylacetate--CoA ligase family protein | - |
| HPG92_RS00270 () | 63878..66286 | - | 2409 | WP_171774001.1 | AMP-binding protein | - |
| HPG92_RS00275 () | 66288..67415 | - | 1128 | WP_171774002.1 | acyl-protein synthase | - |
| HPG92_RS00280 () | 67455..67820 | - | 366 | WP_171774003.1 | hypothetical protein | - |
| HPG92_RS00285 () | 68684..68932 | + | 249 | WP_171774004.1 | DUF883 family protein | - |
| HPG92_RS00290 () | 68985..69338 | + | 354 | WP_171774005.1 | hypothetical protein | - |
| HPG92_RS00295 () | 69444..69896 | + | 453 | WP_171774006.1 | phage holin family protein | - |
| HPG92_RS00300 () | 69893..70186 | + | 294 | WP_171774007.1 | hypothetical protein | - |
| HPG92_RS00305 () | 70773..72872 | - | 2100 | WP_171774008.1 | ATP-binding cassette domain-containing protein | - |
| HPG92_RS00310 () | 72865..74139 | - | 1275 | WP_171774009.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| HPG92_RS00315 () | 74353..74559 | + | 207 | WP_171774010.1 | hypothetical protein | - |
| HPG92_RS00320 () | 74799..76157 | - | 1359 | WP_171774011.1 | IS1182 family transposase | - |
| HPG92_RS00325 () | 76361..77719 | - | 1359 | WP_171774012.1 | IS1182 family transposase | - |
| HPG92_RS00330 () | 77988..78751 | + | 764 | Protein_65 | transposase | - |
| HPG92_RS00335 () | 79207..79434 | + | 228 | WP_171774013.1 | hypothetical protein | - |
| HPG92_RS00340 () | 79682..80332 | + | 651 | WP_171774014.1 | Tn3 family transposase | - |
| HPG92_RS00345 () | 80314..80577 | + | 264 | Protein_68 | helix-turn-helix domain-containing protein | - |
| HPG92_RS00350 () | 80662..82152 | + | 1491 | WP_171774045.1 | PhoPQ-regulated protein | - |
| HPG92_RS00355 () | 82539..83052 | - | 514 | Protein_70 | MobC family mobilization protein | - |
| HPG92_RS00360 () | 84097..84261 | + | 165 | Protein_71 | recombinase family protein | - |
| HPG92_RS00365 () | 84326..84757 | - | 432 | WP_171774015.1 | hypothetical protein | - |
| HPG92_RS00370 () | 85167..85403 | + | 237 | WP_080096647.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| HPG92_RS00375 () | 85491..86033 | + | 543 | WP_171774016.1 | colicin immunity protein Cui | - |
| HPG92_RS00380 () | 86078..87715 | - | 1638 | WP_171774046.1 | hypothetical protein | - |
| HPG92_RS00385 () | 87885..88268 | + | 384 | WP_171774047.1 | Exc2 family lipoprotein | - |
| HPG92_RS00390 () | 88411..88718 | - | 308 | Protein_77 | transposase | - |
| HPG92_RS00395 () | 88723..88941 | + | 219 | WP_171774017.1 | hypothetical protein | - |
| HPG92_RS00400 () | 88998..89255 | + | 258 | WP_171774018.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| HPG92_RS00405 () | 89255..89683 | + | 429 | WP_171774019.1 | PIN domain-containing protein | - |
| HPG92_RS00410 () | 89699..89956 | - | 258 | WP_171774020.1 | bacteriocin immunity protein | - |
| HPG92_RS00415 () | 89959..90168 | - | 210 | WP_171774048.1 | HNH endonuclease | - |
| HPG92_RS00420 () | 90514..91872 | + | 1359 | WP_171774021.1 | IS1182 family transposase | - |
| HPG92_RS00425 () | 92519..92601 | - | 83 | Protein_84 | IS6 family transposase | - |
| HPG92_RS00430 () | 92889..93182 | - | 294 | WP_079894908.1 | hypothetical protein | - |
| HPG92_RS00435 () | 93543..93791 | + | 249 | WP_171774022.1 | Tn3 family transposase | - |
| HPG92_RS00440 () | 93759..94016 | - | 258 | Protein_87 | transposase domain-containing protein | - |
| HPG92_RS00445 () | 94206..94514 | - | 309 | Protein_88 | recombinase family protein | - |
| HPG92_RS00450 () | 94539..94886 | + | 348 | WP_171774023.1 | transposase | - |
| HPG92_RS00455 () | 95752..96269 | + | 518 | Protein_90 | fimbrial protein | - |
| HPG92_RS00460 () | 96404..98797 | + | 2394 | WP_171774024.1 | PefC/AfrB family outer membrane usher protein | - |
| HPG92_RS00465 () | 98805..99464 | + | 660 | WP_171774049.1 | fimbrial chaperone | - |
| HPG92_RS00470 () | 99485..100504 | + | 1020 | WP_171774025.1 | hypothetical protein | - |
| HPG92_RS00475 () | 100517..101068 | + | 552 | WP_171774026.1 | fimbrial protein | - |
| HPG92_RS00480 () | 101083..101628 | + | 546 | WP_171774027.1 | fimbrial protein | - |
| HPG92_RS00485 () | 101873..102226 | + | 354 | WP_171774028.1 | LuxR C-terminal-related transcriptional regulator | - |
| HPG92_RS00490 () | 102277..102486 | + | 210 | WP_171774029.1 | faeA-like family protein | - |
| HPG92_RS00495 () | 102857..103067 | + | 211 | Protein_98 | GNAT family N-acetyltransferase | - |
| HPG92_RS00500 () | 103265..104662 | + | 1398 | WP_171774030.1 | ISNCY family transposase | - |
| HPG92_RS00505 () | 105206..105472 | + | 267 | WP_171774031.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HPG92_RS00510 () | 105459..105755 | + | 297 | WP_171774032.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HPG92_RS00515 () | 106052..106783 | + | 732 | Protein_102 | site-specific integrase | - |
| HPG92_RS00520 () | 107087..108079 | - | 993 | WP_077907168.1 | RepB family plasmid replication initiator protein | - |
| HPG92_RS00525 () | 108933..109202 | + | 270 | WP_171774033.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HPG92_RS00530 () | 109206..109736 | + | 531 | WP_171774034.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HPG92_RS00535 () | 109782..109968 | + | 187 | Protein_106 | transposase | - |
| HPG92_RS00540 () | 110339..110953 | - | 615 | WP_171774035.1 | DNA-binding protein | - |
| HPG92_RS00545 () | 112000..112386 | + | 387 | WP_171774036.1 | hypothetical protein | - |
| HPG92_RS00550 () | 112422..112931 | + | 510 | WP_171774037.1 | hypothetical protein | - |
| HPG92_RS00555 () | 112936..113715 | + | 780 | WP_171774038.1 | tyrosine-type recombinase/integrase | - |
| HPG92_RS00560 () | 113866..114597 | - | 732 | Protein_111 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HPG92_RS00565 () | 114698..115957 | + | 1260 | WP_171774039.1 | tyrosine-type recombinase/integrase | - |
| HPG92_RS00570 () | 115951..116865 | + | 915 | WP_171774040.1 | tyrosine-type recombinase/integrase | - |
| HPG92_RS00575 () | 116862..117863 | + | 1002 | WP_171774041.1 | tyrosine-type recombinase/integrase | - |
| HPG92_RS00580 () | 117965..118216 | - | 252 | Protein_115 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HPG92_RS00585 () | 118631..119836 | + | 1206 | WP_000427674.1 | AAA family ATPase | - |
| HPG92_RS00590 () | 119836..120810 | + | 975 | WP_171774042.1 | ParB/RepB/Spo0J family partition protein | - |
| HPG92_RS00595 () | 120892..121695 | - | 804 | Protein_118 | translesion error-prone DNA polymerase V subunit UmuC | - |
| HPG92_RS00600 () | 121708..122049 | + | 342 | Protein_119 | hypothetical protein | - |
| HPG92_RS00605 () | 122339..122757 | - | 419 | Protein_120 | hypothetical protein | - |
| HPG92_RS00610 () | 122998..123627 | - | 630 | WP_171774043.1 | recombinase family protein | - |
| HPG92_RS00615 () | 123871..124125 | - | 255 | WP_171774044.1 | cobalamin biosynthesis protein CbiX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|