MGE detailed information
MGE type: Genomic_island MGE length: 33804 bp
Accession: NZ_CP053012 Location: 989317..1023120 Organism: Dickeya zeae MS1 Replicon: chromosome
Accession: NZ_CP053012 Location: 989317..1023120 Organism: Dickeya zeae MS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J417_RS04475 (J417_04485) | 984508..985332 | + | 825 | WP_019844397.1 | hypothetical protein | - |
| J417_RS04480 (J417_04490) | 985716..986825 | - | 1110 | WP_019844396.1 | SDR family oxidoreductase | - |
| J417_RS04485 (J417_04495) | 987302..987496 | - | 195 | WP_026357875.1 | MipA/OmpV family protein | - |
| J417_RS04490 (J417_04500) | 987474..987913 | + | 440 | Protein_874 | transposase | - |
| J417_RS04495 (J417_04505) | 988088..989296 | - | 1209 | WP_019844393.1 | MFS transporter | - |
| J417_RS04500 (J417_04510) | 989317..990564 | - | 1248 | WP_019844392.1 | ATP-grasp domain-containing protein | - |
| J417_RS04505 (J417_04515) | 990561..991721 | - | 1161 | WP_019844391.1 | hypothetical protein | - |
| J417_RS04510 (J417_04520) | 991718..992965 | - | 1248 | WP_019844390.1 | ATP-grasp domain-containing protein | - |
| J417_RS04515 (J417_04525) | 993046..993780 | - | 735 | WP_019844389.1 | hypothetical protein | - |
| J417_RS04520 (J417_04530) | 993785..994063 | - | 279 | WP_019844388.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| J417_RS04525 (J417_04535) | 994035..995180 | - | 1146 | WP_019844387.1 | hypothetical protein | - |
| J417_RS04530 (J417_04540) | 995363..996772 | + | 1410 | WP_050563635.1 | PLP-dependent aminotransferase family protein | - |
| J417_RS04535 (J417_04545) | 996889..997674 | - | 786 | WP_019844385.1 | MipA/OmpV family protein | - |
| J417_RS04540 (J417_04550) | 997828..998523 | + | 696 | WP_019844384.1 | Phosphate regulon transcriptional regulatory protein PhoB | VF |
| J417_RS04545 (J417_04555) | 998520..999689 | + | 1170 | WP_019844383.1 | Signal transduction histidine-protein kinase BaeS | VF |
| J417_RS04550 (J417_04560) | 999818..1000960 | + | 1143 | WP_019844382.1 | efflux RND transporter periplasmic adaptor subunit | - |
| J417_RS04555 (J417_04565) | 1000960..1004025 | + | 3066 | WP_026357873.1 | efflux RND transporter permease subunit | - |
| J417_RS04560 (J417_04570) | 1004101..1005348 | - | 1248 | WP_019844380.1 | conjugal transfer protein TraF | - |
| J417_RS04565 (J417_04575) | 1006003..1006398 | + | 396 | WP_019844379.1 | helix-turn-helix domain-containing protein | - |
| J417_RS04570 (J417_04580) | 1006443..1006970 | - | 528 | WP_019844378.1 | ATPase AAA | - |
| J417_RS04575 (J417_04585) | 1007201..1008307 | - | 1107 | WP_019844377.1 | ABC transporter substrate-binding protein | - |
| J417_RS04580 (J417_04590) | 1008796..1013370 | - | 4575 | WP_019844375.1 | ATP-binding protein | - |
| J417_RS04585 (J417_04595) | 1013552..1014139 | - | 588 | WP_019844374.1 | hypothetical protein | - |
| J417_RS04590 (J417_04600) | 1014196..1014456 | - | 261 | WP_019844373.1 | helix-turn-helix transcriptional regulator | - |
| J417_RS04595 (J417_04605) | 1014561..1014821 | - | 261 | WP_019844372.1 | helix-turn-helix transcriptional regulator | - |
| J417_RS04600 (J417_04610) | 1014942..1015238 | + | 297 | WP_172640055.1 | helix-turn-helix transcriptional regulator | - |
| J417_RS04605 (J417_04615) | 1015514..1015807 | + | 294 | WP_019844370.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| J417_RS04610 (J417_04620) | 1015804..1016298 | + | 495 | WP_019844369.1 | GNAT family N-acetyltransferase | Toxin Detail |
| J417_RS04615 (J417_04625) | 1016912..1017949 | + | 1038 | WP_019844368.1 | nucleotidyltransferase | - |
| J417_RS04620 (J417_04630) | 1017946..1019682 | + | 1737 | WP_019844367.1 | ThiF family adenylyltransferase | - |
| J417_RS04625 (J417_04635) | 1019699..1020145 | + | 447 | WP_236377695.1 | Mov34/MPN/PAD-1 family protein | - |
| J417_RS04630 (J417_04640) | 1020155..1021222 | + | 1068 | WP_019844365.1 | SAVED domain-containing protein | - |
| J417_RS04635 (J417_04645) | 1021809..1022351 | - | 543 | WP_236377735.1 | restriction endonuclease | - |
| J417_RS04640 (J417_04650) | 1022594..1022899 | - | 306 | WP_019844363.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| J417_RS04645 (J417_04655) | 1022902..1023120 | - | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| J417_RS04650 (J417_04660) | 1023179..1023922 | - | 744 | WP_019844362.1 | MobC family replication-relaxation protein | - |
| J417_RS04655 (J417_04665) | 1024059..1024229 | + | 171 | WP_172640054.1 | hypothetical protein | - |
| J417_RS04660 (J417_04670) | 1024819..1025169 | - | 351 | WP_019844360.1 | hypothetical protein | - |
| J417_RS04665 (J417_04675) | 1025356..1025550 | + | 195 | WP_019844359.1 | YlcI/YnfO family protein | - |
| J417_RS04670 (J417_04680) | 1025657..1026916 | - | 1260 | WP_019844358.1 | integrase arm-type DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|