MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 185112 bp
Accession: NZ_CP052865 Location: 1..185112 Organism: Burkholderia glumae strain HN1 Replicon: plasmid pBGHN1-1
Accession: NZ_CP052865 Location: 1..185112 Organism: Burkholderia glumae strain HN1 Replicon: plasmid pBGHN1-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HJC54_RS11770 () | 2062..2775 | + | 714 | Protein_1 | adenylyl-sulfate kinase | - |
| HJC54_RS11775 () | 2799..3662 | + | 864 | WP_169511672.1 | sulfotransferase | - |
| HJC54_RS11780 () | 3772..4042 | - | 271 | Protein_3 | IS1182 family transposase ISThsp18 | Transposase |
| HJC54_RS11785 () | 4192..5482 | + | 1291 | Protein_4 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| HJC54_RS11790 () | 5841..6861 | - | 1021 | Protein_5 | IS110 family transposase IS884 | Transposase |
| HJC54_RS11795 () | 7064..7880 | + | 817 | Protein_6 | IS5 family transposase | - |
| HJC54_RS11800 () | 8224..8774 | + | 551 | Protein_7 | HD-GYP domain-containing protein | - |
| HJC54_RS11805 () | 9070..10165 | + | 1096 | Protein_8 | tyrosine-type recombinase/integrase | - |
| HJC54_RS11810 () | 10289..11872 | - | 1584 | WP_169511673.1 | Methyl-accepting chemotaxis protein IV | VF |
| HJC54_RS11815 () | 12737..14429 | + | 1693 | Protein_10 | Methyl-accepting chemotaxis protein I | VF |
| HJC54_RS11820 () | 14605..16427 | + | 1823 | Protein_11 | Methyl-accepting chemotaxis protein I | VF |
| HJC54_RS11825 () | 16545..17033 | + | 489 | WP_080569430.1 | hypothetical protein | - |
| HJC54_RS11830 () | 18746..19791 | + | 1046 | Protein_13 | IS481 family transposase IS1419 | Transposase |
| HJC54_RS11835 () | 19863..21368 | + | 1506 | WP_169511674.1 | Aerotaxis receptor | VF |
| HJC54_RS11840 () | 21468..22185 | + | 718 | Protein_15 | IS3 family transposase IS1416 | Transposase |
| HJC54_RS11845 () | 22416..23461 | + | 1046 | Protein_16 | IS481 family transposase IS1419 | Transposase |
| HJC54_RS11850 () | 23495..24297 | + | 803 | WP_169511701.1 | IS5 family transposase | - |
| HJC54_RS11855 () | 24394..24870 | + | 477 | WP_169511675.1 | IS66 family transposase ISRm2 | Transposase |
| HJC54_RS11860 () | 24959..25195 | + | 237 | WP_080763709.1 | IS66 family transposase ISBmu30 | Transposase |
| HJC54_RS11865 () | 25227..26782 | + | 1556 | Protein_20 | IS66 family transposase ISAeh1 | Transposase |
| HJC54_RS11870 () | 26806..27137 | + | 332 | Protein_21 | integrase core domain-containing protein | - |
| HJC54_RS11875 () | 27169..29260 | - | 2092 | Protein_22 | response regulator | - |
| HJC54_RS11880 () | 29309..29854 | - | 546 | Protein_23 | hybrid sensor histidine kinase/response regulator | - |
| HJC54_RS11885 () | 29851..30630 | - | 780 | WP_012734079.1 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | VF |
| HJC54_RS11890 () | 30850..31587 | - | 738 | WP_017423070.1 | Regulatory protein AtoC | VF |
| HJC54_RS11895 () | 31802..32604 | + | 803 | Protein_26 | IS5 family transposase | - |
| HJC54_RS11900 () | 33278..33916 | + | 639 | WP_169511676.1 | hypothetical protein | - |
| HJC54_RS11905 () | 33992..34396 | + | 405 | WP_169511677.1 | hypothetical protein | - |
| HJC54_RS11910 () | 34852..36699 | + | 1848 | WP_012734082.1 | peptidase C11 | - |
| HJC54_RS11915 () | 36878..37683 | + | 806 | WP_169511678.1 | IS5 family transposase | - |
| HJC54_RS11920 () | 37658..37837 | - | 180 | Protein_31 | IS3 family transposase IS1416 | Transposase |
| HJC54_RS11925 () | 37959..38490 | + | 532 | Protein_32 | IS3 family transposase ISBvi3 | Transposase |
| HJC54_RS11930 () | 38553..38693 | + | 141 | WP_080569432.1 | integrase | - |
| HJC54_RS11935 () | 38955..39356 | - | 402 | Protein_34 | IS6 family transposase | - |
| HJC54_RS11940 () | 39435..39722 | - | 288 | WP_017924497.1 | hypothetical protein | - |
| HJC54_RS11945 () | 39920..40420 | - | 501 | WP_012734085.1 | hypothetical protein | VF |
| HJC54_RS11950 () | 40779..42326 | - | 1548 | WP_012734086.1 | Methyl-accepting chemotaxis protein I | VF |
| HJC54_RS11955 () | 42632..43253 | - | 622 | Protein_38 | IS6 family transposase | - |
| HJC54_RS11960 () | 43389..44048 | - | 660 | WP_169511679.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| HJC54_RS11965 () | 44151..44933 | + | 783 | WP_012734088.1 | helix-turn-helix transcriptional regulator | - |
| HJC54_RS11975 () | 46751..47005 | + | 255 | WP_012734091.1 | antitoxin | - |
| HJC54_RS11980 () | 46996..47406 | + | 411 | WP_039203971.1 | type II toxin-antitoxin system VapC family toxin | - |
| HJC54_RS11985 () | 47469..47786 | + | 318 | WP_017925051.1 | hypothetical protein | - |
| HJC54_RS11990 () | 47821..48201 | + | 381 | WP_080763664.1 | hypothetical protein | - |
| HJC54_RS11995 () | 48198..50021 | + | 1824 | WP_039203972.1 | site-specific integrase | - |
| HJC54_RS12000 () | 50064..50273 | + | 210 | WP_017925019.1 | hypothetical protein | - |
| HJC54_RS12005 () | 50489..51172 | + | 684 | WP_169511702.1 | IS6 family transposase ISDge13 | Transposase |
| HJC54_RS12010 () | 51579..54086 | + | 2508 | WP_039203083.1 | type VI secretion system tip protein VgrG | - |
| HJC54_RS12015 () | 54139..57042 | + | 2904 | WP_039203085.1 | SH3 domain-containing protein | - |
| HJC54_RS12020 () | 57050..57586 | + | 537 | WP_017924909.1 | hypothetical protein | - |
| HJC54_RS12025 () | 57599..57850 | + | 252 | WP_012735336.1 | hypothetical protein | VF |
| HJC54_RS12030 () | 57981..58319 | - | 339 | Protein_53 | IS6 family transposase ISApr5 | Transposase |
| HJC54_RS12035 () | 58241..59797 | - | 1557 | WP_169511681.1 | IS66 family transposase ISAeh1 | Transposase |
| HJC54_RS12040 () | 59829..60065 | - | 237 | WP_080763709.1 | IS66 family transposase ISBmu30 | Transposase |
| HJC54_RS12045 () | 60154..60629 | - | 476 | Protein_56 | IS66 family transposase ISRm2 | Transposase |
| HJC54_RS12050 () | 60858..61910 | - | 1053 | WP_012732755.1 | AraC family transcriptional regulator ligand-binding domain-containing protein | - |
| HJC54_RS12055 () | 62055..63476 | + | 1422 | WP_012732756.1 | coniferyl aldehyde dehydrogenase | - |
| HJC54_RS12060 () | 63503..65203 | + | 1701 | WP_012732757.1 | GMC family oxidoreductase N-terminal domain-containing protein | - |
| HJC54_RS12065 () | 65190..67655 | + | 2466 | WP_012732758.1 | Baeyer-Villiger monooxygenase | VF |
| HJC54_RS12070 () | 67662..68135 | - | 474 | Protein_61 | IS5 family transposase | - |
| HJC54_RS12075 () | 68187..69653 | - | 1467 | WP_169511703.1 | ATP-binding domain-containing protein | - |
| HJC54_RS12080 () | 70037..70854 | + | 818 | WP_088499524.1 | IS5 family transposase | - |
| HJC54_RS12085 () | 70991..72355 | - | 1365 | Protein_64 | error-prone DNA polymerase | - |
| HJC54_RS12090 () | 72485..72814 | + | 330 | WP_085967323.1 | DNA-binding protein Bv3F | VF |
| HJC54_RS12095 () | 72823..73086 | + | 264 | WP_017432678.1 | hypothetical protein | - |
| HJC54_RS12100 () | 73344..73886 | - | 543 | WP_080742217.1 | GNAT family N-acetyltransferase | - |
| HJC54_RS12105 () | 74153..74482 | + | 330 | WP_169511682.1 | NIPSNAP family protein | - |
| HJC54_RS12110 () | 74479..74841 | + | 363 | WP_169511683.1 | antibiotic biosynthesis monooxygenase | - |
| HJC54_RS12115 () | 74923..75657 | + | 735 | WP_169511704.1 | winged helix-turn-helix domain-containing protein | - |
| HJC54_RS12120 () | 76089..76475 | - | 387 | WP_169511684.1 | hypothetical protein | - |
| HJC54_RS12125 () | 76475..77173 | - | 699 | WP_169511685.1 | hypothetical protein | - |
| HJC54_RS12130 () | 77641..78789 | + | 1149 | WP_169511686.1 | DUF3560 domain-containing protein | - |
| HJC54_RS12135 () | 78923..79369 | - | 447 | WP_017432684.1 | hypothetical protein | - |
| HJC54_RS12140 () | 79421..79897 | - | 477 | WP_169511687.1 | hypothetical protein | - |
| HJC54_RS12145 () | 80745..81158 | + | 414 | WP_169511705.1 | hypothetical protein | - |
| HJC54_RS12150 () | 81224..81880 | + | 657 | WP_169511688.1 | hypothetical protein | - |
| HJC54_RS12155 () | 82481..83845 | + | 1365 | Protein_78 | ParB/RepB/Spo0J family partition protein | - |
| HJC54_RS12165 () | 85218..85976 | - | 759 | Protein_80 | IS110 family transposase ISBfun1 | Transposase |
| HJC54_RS12170 () | 85978..86793 | - | 816 | Protein_81 | IS5 family transposase | - |
| HJC54_RS12175 () | 86883..87131 | - | 249 | Protein_82 | transposase | - |
| HJC54_RS12180 () | 87606..88126 | + | 521 | Protein_83 | IS5 family transposase | - |
| HJC54_RS12185 () | 88157..89131 | - | 975 | WP_012735262.1 | RepA replicase | - |
| HJC54_RS12190 () | 90287..91309 | - | 1023 | WP_012735261.1 | ParB/RepB/Spo0J family partition protein | - |
| HJC54_RS12195 () | 91312..91965 | - | 654 | WP_012735260.1 | AAA family ATPase | - |
| HJC54_RS12200 () | 92654..93742 | + | 1089 | WP_148271093.1 | hypothetical protein | - |
| HJC54_RS12205 () | 94191..94460 | + | 270 | WP_017424109.1 | DUF1778 domain-containing protein | - |
| HJC54_RS12210 () | 94457..94945 | + | 489 | WP_169511689.1 | GNAT family N-acetyltransferase | - |
| HJC54_RS12215 () | 95221..95505 | + | 285 | WP_017924445.1 | hypothetical protein | - |
| HJC54_RS12220 () | 95518..95757 | + | 240 | WP_017924444.1 | hypothetical protein | - |
| HJC54_RS12225 () | 95754..96089 | + | 336 | WP_155297056.1 | hypothetical protein | - |
| HJC54_RS12230 () | 96086..96427 | + | 342 | WP_039204389.1 | hypothetical protein | - |
| HJC54_RS12235 () | 96430..98265 | + | 1836 | WP_169511690.1 | site-specific integrase | - |
| HJC54_RS12240 () | 98350..98775 | + | 426 | WP_039204392.1 | hypothetical protein | - |
| HJC54_RS12245 () | 98989..100698 | + | 1710 | WP_153479184.1 | Methyl-accepting chemotaxis protein I | VF |
| HJC54_RS12250 () | 101134..102636 | + | 1503 | Protein_97 | IS21 family transposase | - |
| HJC54_RS12255 () | 102676..103425 | + | 750 | WP_169511691.1 | IS21 family transposase ISCsp4 | Transposase |
| HJC54_RS12260 () | 103555..104214 | + | 660 | WP_169511692.1 | tyrosine-type recombinase/integrase | - |
| HJC54_RS12265 () | 104351..104587 | + | 237 | WP_017924531.1 | AbrB family transcriptional regulator | Antitoxin Detail |
| HJC54_RS12270 () | 104587..104988 | + | 402 | WP_012735347.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HJC54_RS12275 () | 105237..105566 | + | 330 | WP_155297075.1 | hypothetical protein | - |
| HJC54_RS12280 () | 105584..105826 | + | 243 | WP_039205039.1 | hypothetical protein | - |
| HJC54_RS12285 () | 105967..106695 | + | 729 | WP_012735342.1 | IS6 family transposase ISDge13 | Transposase |
| HJC54_RS12290 () | 106894..107016 | - | 123 | Protein_105 | AAA family ATPase | - |
| HJC54_RS12295 () | 107101..107742 | - | 642 | WP_169511693.1 | DsbA family protein | - |
| HJC54_RS12300 () | 107766..108677 | - | 912 | WP_161522130.1 | Fatty acyl-CoA reductase | VF |
| HJC54_RS12305 () | 108707..109360 | - | 654 | WP_161522129.1 | SDR family oxidoreductase | - |
| HJC54_RS12310 () | 109365..109982 | - | 618 | WP_169511694.1 | NAD(P)H-dependent oxidoreductase | - |
| HJC54_RS12315 () | 110092..110526 | + | 435 | WP_161522145.1 | helix-turn-helix transcriptional regulator | - |
| HJC54_RS12320 () | 111111..111839 | - | 729 | WP_012735342.1 | IS6 family transposase ISDge13 | Transposase |
| HJC54_RS12325 () | 111880..112833 | + | 954 | Protein_112 | tyrosine-type recombinase/integrase | - |
| HJC54_RS12330 () | 112918..113343 | + | 426 | WP_169511695.1 | hypothetical protein | - |
| HJC54_RS12335 () | 113606..113857 | + | 252 | WP_012734108.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HJC54_RS12340 () | 113851..114201 | + | 351 | WP_012734107.1 | type II toxin-antitoxin system ChpB family toxin | Toxin Detail |
| HJC54_RS12345 () | 114260..114406 | + | 147 | WP_169511696.1 | hypothetical protein | - |
| HJC54_RS12350 () | 114503..115548 | + | 1046 | Protein_117 | IS481 family transposase IS1419 | Transposase |
| HJC54_RS12355 () | 115825..116046 | + | 222 | WP_017433768.1 | hypothetical protein | - |
| HJC54_RS12360 () | 116269..116733 | + | 465 | WP_012734106.1 | Lrp/AsnC family transcriptional regulator | - |
| HJC54_RS12365 () | 117035..119422 | + | 2388 | WP_045678668.1 | TonB-dependent receptor | - |
| HJC54_RS12370 () | 119412..120200 | + | 789 | WP_012734104.1 | hypothetical protein | VF |
| HJC54_RS12375 () | 120224..120958 | + | 735 | WP_012733849.1 | MotA/TolQ/ExbB proton channel family protein | - |
| HJC54_RS12380 () | 120973..121395 | + | 423 | WP_012734103.1 | biopolymer transporter ExbD | - |
| HJC54_RS12385 () | 121392..123164 | + | 1773 | WP_100556611.1 | ABC transporter ATP-binding protein/permease | - |
| HJC54_RS12390 () | 123246..124484 | + | 1239 | WP_100556612.1 | thioredoxin | - |
| HJC54_RS12395 () | 124782..125156 | + | 375 | Protein_126 | IS6 family transposase | - |
| HJC54_RS12400 () | 125306..126421 | - | 1116 | WP_012734101.1 | dimethyl sulfone monooxygenase SfnG | - |
| HJC54_RS12405 () | 126451..127086 | - | 636 | WP_012734100.1 | FMN reductase | - |
| HJC54_RS12410 () | 127913..129028 | + | 1116 | WP_017923789.1 | Transcriptional regulatory protein ZraR | VF |
| HJC54_RS12415 () | 129415..129648 | + | 234 | Protein_130 | site-specific integrase | - |
| HJC54_RS12420 () | 129956..131023 | + | 1068 | WP_161522135.1 | putative signaling protein | VF |
| HJC54_RS12425 () | 130989..131792 | - | 804 | Protein_132 | IS5 family transposase | - |
| HJC54_RS12430 () | 132053..132779 | - | 727 | Protein_133 | IS6 family transposase | - |
| HJC54_RS12435 () | 132795..133193 | - | 399 | WP_169511706.1 | nuclear transport factor 2 family protein | - |
| HJC54_RS12440 () | 133275..134216 | + | 942 | WP_017424861.1 | Glycine cleavage system transcriptional activator | VF |
| HJC54_RS12445 () | 134240..134716 | + | 477 | Protein_136 | integrase | - |
| HJC54_RS12450 () | 135198..136436 | - | 1239 | WP_045678675.1 | FAD-dependent monooxygenase | - |
| HJC54_RS12455 () | 137164..138015 | - | 852 | WP_100556614.1 | helix-turn-helix transcriptional regulator | - |
| HJC54_RS12460 () | 138242..138661 | + | 420 | WP_012734057.1 | hypothetical protein | - |
| HJC54_RS12465 () | 138771..139139 | - | 369 | Protein_140 | IS481 family transposase IS1419 | Transposase |
| HJC54_RS12470 () | 139201..140438 | + | 1238 | WP_124837732.1 | IS3 family transposase IS1417 | Transposase |
| HJC54_RS12475 () | 140470..140724 | + | 255 | Protein_142 | IS21 family transposase ISBmu3 | Transposase |
| HJC54_RS12480 () | 141374..141568 | - | 195 | WP_124837731.1 | hypothetical protein | - |
| HJC54_RS12485 () | 141638..141940 | - | 303 | WP_169511697.1 | hypothetical protein | - |
| HJC54_RS12490 () | 142004..142246 | - | 243 | WP_012734062.1 | hypothetical protein | - |
| HJC54_RS12495 () | 142259..142522 | - | 264 | WP_017433216.1 | hypothetical protein | - |
| HJC54_RS12500 () | 142534..142854 | - | 321 | WP_012734063.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| HJC54_RS12505 () | 142848..143096 | - | 249 | WP_012734064.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| HJC54_RS12510 () | 143208..143879 | - | 672 | WP_012734065.1 | site-specific integrase | - |
| HJC54_RS12515 () | 144004..144294 | - | 291 | WP_017425259.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| HJC54_RS12520 () | 144334..146093 | - | 1760 | Protein_151 | tyrosine-type recombinase/integrase | - |
| HJC54_RS12525 () | 146883..147566 | + | 684 | WP_012734068.1 | putative adenylyl-sulfate kinase | VF |
| HJC54_RS12530 () | 147639..148454 | + | 816 | WP_035976812.1 | sulfotransferase | - |
| HJC54_RS12535 () | 148564..148836 | - | 273 | Protein_154 | IS1182 family transposase ISThsp18 | Transposase |
| HJC54_RS12540 () | 148986..150281 | + | 1296 | WP_012734070.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| HJC54_RS12545 () | 150640..151660 | - | 1021 | Protein_156 | IS110 family transposase IS884 | Transposase |
| HJC54_RS12550 () | 151861..152674 | + | 814 | Protein_157 | IS5 family transposase | - |
| HJC54_RS12555 () | 153021..153572 | + | 552 | WP_017924798.1 | HD-GYP domain-containing protein | - |
| HJC54_RS12560 () | 153867..154965 | + | 1099 | Protein_159 | tyrosine-type recombinase/integrase | - |
| HJC54_RS12565 () | 155089..156669 | - | 1581 | Protein_160 | Methyl-accepting chemotaxis protein IV | VF |
| HJC54_RS29390 () | 157151..157495 | + | 345 | WP_017432531.1 | hypothetical protein | - |
| HJC54_RS12575 () | 157535..159232 | + | 1698 | WP_012732723.1 | Methyl-accepting chemotaxis protein I | VF |
| HJC54_RS12580 () | 159408..161131 | + | 1724 | Protein_163 | Methyl-accepting chemotaxis protein I | VF |
| HJC54_RS12585 () | 161350..161838 | + | 489 | WP_080569430.1 | hypothetical protein | - |
| HJC54_RS12590 () | 163552..164598 | + | 1047 | WP_169511171.1 | IS481 family transposase IS1419 | Transposase |
| HJC54_RS12595 () | 164670..166173 | + | 1504 | Protein_166 | Methyl-accepting chemotaxis protein IV | VF |
| HJC54_RS12600 () | 166273..166989 | + | 717 | Protein_167 | IS3 family transposase | - |
| HJC54_RS12605 () | 167221..168266 | + | 1046 | Protein_168 | IS481 family transposase IS1419 | Transposase |
| HJC54_RS12610 () | 168300..169150 | + | 851 | WP_169511707.1 | IS5 family transposase | - |
| HJC54_RS12615 () | 169198..169670 | + | 473 | Protein_170 | transposase | - |
| HJC54_RS12620 () | 169759..169995 | + | 237 | WP_080763709.1 | IS66 family transposase ISBmu30 | Transposase |
| HJC54_RS12625 () | 170027..171583 | + | 1557 | WP_012732752.1 | IS66 family transposase ISAeh1 | Transposase |
| HJC54_RS12630 () | 171610..171942 | + | 333 | Protein_173 | IS3 family transposase IS1416 | Transposase |
| HJC54_RS12635 () | 171974..174061 | - | 2088 | Protein_174 | response regulator | - |
| HJC54_RS12640 () | 174110..174655 | - | 546 | Protein_175 | hybrid sensor histidine kinase/response regulator | - |
| HJC54_RS12645 () | 174652..175424 | - | 773 | Protein_176 | response regulator | - |
| HJC54_RS12650 () | 175644..176380 | - | 737 | Protein_177 | Transcriptional regulatory protein tctD | VF |
| HJC54_RS12655 () | 176593..177392 | + | 800 | Protein_178 | IS5 family transposase | - |
| HJC54_RS12660 () | 178595..179533 | + | 939 | WP_169511698.1 | hypothetical protein | - |
| HJC54_RS12665 () | 179635..181477 | + | 1843 | Protein_180 | peptidase C11 | - |
| HJC54_RS12670 () | 181656..182452 | + | 797 | Protein_181 | IS5 family transposase | - |
| HJC54_RS12675 () | 182657..183040 | + | 384 | WP_169511699.1 | IS3 family transposase ISBvi3 | Transposase |
| HJC54_RS12680 () | 183146..183253 | + | 108 | WP_169511700.1 | IS3 family transposase ISBvi3 | Transposase |
| HJC54_RS12685 () | 183315..183455 | + | 141 | WP_080569432.1 | integrase | - |
| HJC54_RS12690 () | 183716..184113 | - | 398 | Protein_185 | IS6 family transposase | - |
| HJC54_RS12695 () | 184241..184477 | - | 237 | Protein_186 | integrase | - |
| HJC54_RS12700 () | 184674..185103 | - | 430 | Protein_187 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|