MGE detailed information
MGE type: Conjugative plasmid MGE length: 71625 bp
Accession: NZ_CP051737 Location: 1..71625 Organism: Escherichia coli strain SCU-108 Replicon: plasmid pSCU-108-2
Accession: NZ_CP051737 Location: 1..71625 Organism: Escherichia coli strain SCU-108 Replicon: plasmid pSCU-108-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ26_RS25690 () | 1..858 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| HHJ26_RS25150 () | 1560..1820 | + | 261 | WP_019842130.1 | hypothetical protein | - |
| HHJ26_RS25155 () | 1927..2190 | + | 264 | WP_001089473.1 | hypothetical protein | - |
| HHJ26_RS25160 () | 2180..2479 | + | 300 | WP_001528606.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HHJ26_RS25165 () | 2515..3180 | - | 666 | WP_001535733.1 | hypothetical protein | - |
| HHJ26_RS25170 () | 3368..4228 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HHJ26_RS25175 () | 4411..4968 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HHJ26_RS25180 () | 5132..8137 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HHJ26_RS25185 () | 8705..9268 | - | 564 | WP_000351266.1 | pentapeptide repeat-containing protein | - |
| HHJ26_RS25190 () | 9272..10003 | - | 732 | WP_000155032.1 | ATP-binding cassette domain-containing protein | - |
| HHJ26_RS25195 () | 10000..10725 | - | 726 | WP_000258040.1 | microcin B17 immunity protein McbE | - |
| HHJ26_RS25200 () | 10735..11925 | - | 1191 | WP_000611492.1 | YcaO-like family protein | - |
| HHJ26_RS25205 () | 11906..12724 | - | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| HHJ26_RS25210 () | 12726..13613 | - | 888 | WP_000243884.1 | McbB family protein | - |
| HHJ26_RS25215 () | 13640..13849 | - | 210 | WP_001535752.1 | microcin B17 | - |
| HHJ26_RS25220 () | 14379..14831 | + | 453 | WP_000670962.1 | N-acetyltransferase | - |
| HHJ26_RS25230 () | 15234..15584 | - | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| HHJ26_RS25235 () | 15587..16549 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| HHJ26_RS25240 () | 17085..17987 | + | 903 | WP_077759229.1 | DUF1281 domain-containing protein | - |
| HHJ26_RS25245 () | 17984..18295 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| HHJ26_RS25250 () | 18371..19054 | + | 684 | WP_000086169.1 | DNA methylase | - |
| HHJ26_RS25255 () | 19055..19276 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| HHJ26_RS25260 () | 19290..19724 | + | 435 | WP_000274508.1 | DUF1380 family protein | - |
| HHJ26_RS25265 () | 19769..20539 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| HHJ26_RS25275 () | 21078..21380 | + | 303 | WP_001364029.1 | antirestriction protein | - |
| HHJ26_RS25280 () | 21427..21846 | + | 420 | WP_169059429.1 | DUF1380 family protein | - |
| HHJ26_RS25285 () | 21846..22037 | + | 192 | WP_001027049.1 | hypothetical protein | - |
| HHJ26_RS25290 () | 22016..22324 | - | 309 | WP_050576143.1 | hypothetical protein | - |
| HHJ26_RS25295 () | 23005..23235 | + | 231 | WP_000218644.1 | hypothetical protein | - |
| HHJ26_RS25300 () | 23287..24648 | + | 1362 | WP_000170670.1 | DUF3560 domain-containing protein | - |
| HHJ26_RS25305 () | 24695..25258 | + | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| HHJ26_RS25310 () | 25344..25679 | - | 336 | Protein_32 | pilus protein | - |
| HHJ26_RS25315 () | 26071..26598 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| HHJ26_RS25320 () | 26656..26889 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| HHJ26_RS25325 () | 26950..28914 | + | 1965 | WP_000117316.1 | ParB/RepB/Spo0J family partition protein | - |
| HHJ26_RS25330 () | 28983..29417 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| HHJ26_RS25335 () | 29414..30133 | + | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| - () | 30145..30369 | + | 225 | NuclAT_0 | - | - |
| - () | 30145..30369 | + | 225 | NuclAT_0 | - | - |
| - () | 30145..30369 | + | 225 | NuclAT_0 | - | - |
| - () | 30145..30369 | + | 225 | NuclAT_0 | - | - |
| HHJ26_RS25340 () | 30154..30333 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| HHJ26_RS25345 () | 30413..30571 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HHJ26_RS25350 () | 30808..31143 | - | 336 | WP_032195784.1 | hypothetical protein | - |
| HHJ26_RS25360 () | 31486..31782 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| HHJ26_RS25365 () | 31893..32714 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| HHJ26_RS25370 () | 33011..33613 | - | 603 | Protein_43 | hypothetical protein | VF |
| HHJ26_RS25375 () | 33934..34317 | + | 384 | WP_001151538.1 | relaxosome protein TraM | - |
| HHJ26_RS25380 () | 34504..35193 | + | 690 | WP_016239105.1 | conjugal transfer transcriptional regulator TraJ | - |
| HHJ26_RS25385 () | 35292..35687 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| HHJ26_RS25390 () | 35720..36079 | + | 360 | WP_001099001.1 | type IV conjugative transfer system pilin TraA | - |
| HHJ26_RS25395 () | 36094..36405 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| HHJ26_RS25400 () | 36427..36993 | + | 567 | WP_000399801.1 | type IV conjugative transfer system protein TraE | - |
| HHJ26_RS25405 () | 36980..37708 | + | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| HHJ26_RS25410 () | 37708..39159 | + | 1452 | WP_001620787.1 | conjugal transfer protein TraB | - |
| HHJ26_RS25415 () | 39128..39715 | + | 588 | WP_001309238.1 | conjugal transfer protein TraP | - |
| HHJ26_RS25420 () | 39669..40019 | + | 351 | WP_071586941.1 | conjugal transfer protein TrbD | - |
| HHJ26_RS25425 () | 40019..40534 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HHJ26_RS25430 () | 40669..40890 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| HHJ26_RS25435 () | 40883..41360 | + | 478 | Protein_56 | hypothetical protein | - |
| HHJ26_RS25440 () | 41440..41658 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| HHJ26_RS25445 () | 41686..42033 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| HHJ26_RS25450 () | 42159..44789 | + | 2631 | WP_032152342.1 | type IV secretion system protein TraC | - |
| HHJ26_RS25455 () | 44786..45172 | + | 387 | WP_169059430.1 | type-F conjugative transfer system protein TrbI | - |
| HHJ26_RS25460 () | 45169..45801 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| HHJ26_RS25465 () | 45798..46790 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| HHJ26_RS25470 () | 46820..47125 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| HHJ26_RS25475 () | 47134..47772 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HHJ26_RS25480 () | 47769..49619 | + | 1851 | WP_000821860.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HHJ26_RS25485 () | 49646..49903 | + | 258 | WP_000864329.1 | conjugal transfer protein TrbE | - |
| HHJ26_RS25490 () | 49896..50639 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HHJ26_RS25495 () | 50653..50997 | + | 345 | WP_087903917.1 | conjugal transfer protein TrbA | - |
| HHJ26_RS25500 () | 51116..51400 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HHJ26_RS25505 () | 51387..51932 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HHJ26_RS25510 () | 51862..52209 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| HHJ26_RS25515 () | 52157..52582 | + | 426 | WP_001323332.1 | F-type conjugal transfer protein TrbF | - |
| HHJ26_RS25520 () | 52569..53942 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| HHJ26_RS25525 () | 53939..56764 | + | 2826 | WP_019842172.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HHJ26_RS25530 () | 56761..57270 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| HHJ26_RS25535 () | 57284..58015 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| HHJ26_RS25540 () | 58218..58955 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| HHJ26_RS25545 () | 59006..61150 | + | 2145 | WP_016237336.1 | type IV conjugative transfer system coupling protein TraD | - |
| HHJ26_RS25550 () | 61150..66420 | + | 5271 | WP_169059431.1 | Multifunctional conjugation protein TraI | Relaxase |
| HHJ26_RS25555 () | 66440..67186 | + | 747 | WP_019842127.1 | conjugal transfer pilus acetylase TraX | - |
| HHJ26_RS25560 () | 67241..67798 | + | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| HHJ26_RS25565 () | 67950..68153 | + | 204 | WP_001336517.1 | hypothetical protein | - |
| HHJ26_RS25570 () | 68895..69356 | + | 462 | WP_019842128.1 | thermonuclease family protein | - |
| HHJ26_RS25695 () | 69459..69843 | + | 385 | Protein_84 | hypothetical protein | - |
| HHJ26_RS25580 () | 69996..70433 | + | 438 | WP_000872609.1 | hypothetical protein | - |
| - () | 70528..70584 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 70528..70584 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 70528..70584 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 70528..70584 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| HHJ26_RS25585 () | 70632..70781 | + | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HHJ26_RS25590 () | 71066..71323 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|