MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NZ_CP051728 Location: 51961..52419 Organism: Escherichia coli strain SCU-111 Replicon: plasmid pSCU-111-1
Accession: NZ_CP051728 Location: 51961..52419 Organism: Escherichia coli strain SCU-111 Replicon: plasmid pSCU-111-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ28_RS23030 () | 47284..47502 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HHJ28_RS23035 () | 47504..47809 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HHJ28_RS23040 () | 47810..48616 | + | 807 | WP_077781165.1 | site-specific integrase | - |
| HHJ28_RS23045 () | 49174..49929 | + | 756 | WP_169062083.1 | replication initiation protein RepE | - |
| HHJ28_RS23050 () | 50777..51409 | + | 633 | WP_000312330.1 | ParA family protein | - |
| HHJ28_RS23055 () | 51409..51783 | + | 375 | WP_042021187.1 | hypothetical protein | - |
| HHJ28_RS23060 () | 51961..52419 | + | 459 | WP_000526115.1 | IS200-IS605 family transposase IS200C | Transposase |
| HHJ28_RS23065 () | 52735..53709 | + | 975 | WP_097469860.1 | StbA family protein | - |
| HHJ28_RS23070 () | 53713..54105 | + | 393 | WP_000272016.1 | plasmid partitioning/stability family protein | - |
| HHJ28_RS23075 () | 54240..54368 | - | 129 | Protein_56 | DinI family protein | - |
| HHJ28_RS23080 () | 54786..55535 | + | 750 | Protein_57 | DUF1281 domain-containing protein | - |
| HHJ28_RS24310 () | 55495..55974 | - | 480 | WP_211201816.1 | hypothetical protein | - |
| HHJ28_RS23085 () | 56475..56705 | + | 231 | WP_000218642.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O127:H6 str. E2348/69 | IS/Tn | TA10121 | NC_011601 | 3945427..3945885 | 0.007 |