MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 65217 bp
Accession: NZ_CP051721 Location: 1..65217 Organism: Escherichia coli strain SCU-116 Replicon: plasmid pSCU-116-2
Accession: NZ_CP051721 Location: 1..65217 Organism: Escherichia coli strain SCU-116 Replicon: plasmid pSCU-116-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ31_RS24610 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| HHJ31_RS24615 () | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| HHJ31_RS24620 () | 2124..2306 | - | 183 | WP_042344623.1 | hypothetical protein | - |
| HHJ31_RS24625 () | 2649..2956 | - | 308 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| HHJ31_RS24630 () | 3453..4622 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| HHJ31_RS24635 () | 4848..5023 | - | 176 | Protein_5 | IS3 family transposase | - |
| HHJ31_RS24640 () | 5469..5741 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| HHJ31_RS24645 () | 6266..6702 | - | 437 | Protein_7 | IS3 family transposase IS2 | Transposase |
| HHJ31_RS24650 () | 6984..8954 | + | 1971 | WP_001496335.1 | Hemin receptor | VF |
| HHJ31_RS24655 () | 8961..9752 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| HHJ31_RS24660 () | 9815..10423 | - | 609 | Protein_10 | IS66 family transposase ISEc22 | Transposase |
| HHJ31_RS24665 () | 10491..11273 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| HHJ31_RS24670 () | 11270..12292 | - | 1023 | WP_001297914.1 | IS21 family transposase IS100kyp | Transposase |
| HHJ31_RS24675 () | 12378..13323 | - | 946 | Protein_13 | IS66 family transposase ISEc8 | Transposase |
| HHJ31_RS24680 () | 13372..13746 | - | 375 | WP_024193849.1 | IS66 family transposase ISKpn24 | Transposase |
| HHJ31_RS24685 () | 13771..14475 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HHJ31_RS24690 () | 14526..15581 | - | 1056 | Protein_16 | DUF262 domain-containing protein | - |
| HHJ31_RS24695 () | 15866..16267 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HHJ31_RS24700 () | 16200..16457 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HHJ31_RS24705 () | 16550..17203 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HHJ31_RS24710 () | 18417..18629 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| HHJ31_RS24715 () | 18760..19122 | - | 363 | Protein_21 | fertility inhibition protein FinO | - |
| HHJ31_RS24720 () | 19118..22369 | - | 3252 | Protein_22 | Multifunctional conjugation protein TraI | Relaxase |
| HHJ31_RS24725 () | 22369..24105 | - | 1737 | WP_169063395.1 | type IV conjugative transfer system coupling protein TraD | - |
| HHJ31_RS24730 () | 24089..25699 | - | 1611 | Protein_24 | conjugal transfer mating pair stabilization protein TraG | - |
| HHJ31_RS25055 () | 25747..25837 | - | 91 | Protein_25 | conjugal transfer protein TraB | - |
| HHJ31_RS24735 () | 25833..26285 | - | 453 | Protein_26 | DNA methylase | - |
| HHJ31_RS24740 () | 26362..26666 | - | 305 | Protein_27 | hypothetical protein | - |
| HHJ31_RS24745 () | 26670..27572 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| HHJ31_RS24750 () | 28439..29410 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HHJ31_RS24755 () | 29410..30576 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| HHJ31_RS24760 () | 31164..31919 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HHJ31_RS24765 () | 32693..33499 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| HHJ31_RS24770 () | 33500..33805 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HHJ31_RS24775 () | 33807..34025 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HHJ31_RS24780 () | 34592..35104 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| HHJ31_RS24785 () | 35138..36271 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| HHJ31_RS24790 () | 36438..37211 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| HHJ31_RS24795 () | 37224..37724 | - | 501 | WP_000528931.1 | hypothetical protein | - |
| HHJ31_RS24800 () | 37989..38219 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HHJ31_RS24805 () | 38216..38632 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HHJ31_RS24810 () | 38677..42471 | - | 3795 | WP_211196987.1 | pcar | - |
| HHJ31_RS24815 () | 42852..43082 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HHJ31_RS24820 () | 43079..43495 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HHJ31_RS24825 () | 43570..45135 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| HHJ31_RS24830 () | 45120..46142 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| HHJ31_RS24835 () | 46396..47093 | - | 698 | Protein_46 | IS1 family transposase IS1A | Transposase |
| HHJ31_RS24840 () | 47449..48363 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| HHJ31_RS24845 () | 48363..49190 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| HHJ31_RS24850 () | 49187..50044 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| HHJ31_RS24855 () | 50041..50898 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| HHJ31_RS24860 () | 51132..51389 | - | 258 | Protein_51 | Tn3 family transposase | - |
| HHJ31_RS24865 () | 51387..51800 | + | 414 | Protein_52 | phosphopyruvate hydratase | - |
| HHJ31_RS24870 () | 52141..52521 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| HHJ31_RS24875 () | 52901..54094 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| HHJ31_RS24880 () | 54230..55954 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| HHJ31_RS24885 () | 55955..56902 | + | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| HHJ31_RS24890 () | 56902..58644 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| HHJ31_RS24895 () | 58641..59918 | + | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| HHJ31_RS24900 () | 60000..62201 | + | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| HHJ31_RS24905 () | 62581..63278 | + | 698 | Protein_60 | IS1 family transposase IS1A | Transposase |
| HHJ31_RS24910 () | 63458..63982 | - | 525 | Protein_61 | DUF4113 domain-containing protein | - |
| HHJ31_RS25060 () | 64043..64147 | - | 105 | Protein_62 | AAA family ATPase | - |
| HHJ31_RS24915 () | 64149..64472 | - | 324 | Protein_63 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|