MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 105394 bp
Accession: NZ_CP051695 Location: 1..105394 Organism: Escherichia coli strain SCU-313 Replicon: plasmid pSCU-313-1
Accession: NZ_CP051695 Location: 1..105394 Organism: Escherichia coli strain SCU-313 Replicon: plasmid pSCU-313-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ46_RS24385 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| HHJ46_RS24390 () | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| HHJ46_RS24395 () | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| HHJ46_RS24400 () | 2649..2956 | - | 308 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| HHJ46_RS24405 () | 3449..4618 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| HHJ46_RS24410 () | 4651..4779 | + | 129 | Protein_5 | IS481 family transposase | - |
| HHJ46_RS24415 () | 4814..5107 | - | 294 | WP_001105060.1 | hypothetical protein | - |
| HHJ46_RS24420 () | 5213..5488 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HHJ46_RS24425 () | 5488..5772 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| HHJ46_RS24430 () | 6377..7129 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| HHJ46_RS24435 () | 7175..8140 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| HHJ46_RS24440 () | 8173..8553 | - | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| HHJ46_RS24445 () | 8578..9468 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| HHJ46_RS24450 () | 9701..9895 | - | 195 | WP_000796505.1 | hypothetical protein | - |
| HHJ46_RS24455 () | 9869..10309 | + | 441 | Protein_14 | zinc-binding dehydrogenase | - |
| HHJ46_RS24460 () | 10440..11318 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| HHJ46_RS24465 () | 11308..12196 | + | 889 | Protein_16 | carbohydrate ABC transporter permease | - |
| HHJ46_RS24470 () | 12207..13031 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| HHJ46_RS24475 () | 13037..14110 | + | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| HHJ46_RS24480 () | 14103..15413 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| HHJ46_RS24485 () | 15472..15780 | - | 309 | Protein_20 | IS4 family transposase ISEc13 | Transposase |
| HHJ46_RS24490 () | 15857..16090 | - | 234 | Protein_21 | Tn3 family transposase ISPsy39 | Transposase |
| HHJ46_RS24495 () | 16112..17308 | - | 1197 | Protein_22 | IS3 family transposase | - |
| HHJ46_RS24500 () | 17333..18037 | + | 705 | WP_169062237.1 | IS6 family transposase IS15DI | Transposase |
| HHJ46_RS24505 () | 18095..18625 | - | 531 | Protein_24 | histidine-type phosphatase | - |
| HHJ46_RS24510 () | 18747..19232 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| HHJ46_RS24515 () | 19257..19742 | - | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| HHJ46_RS24520 () | 19729..20424 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| HHJ46_RS24525 () | 20429..21559 | - | 1131 | WP_000729220.1 | ABC transporter permease | - |
| HHJ46_RS24530 () | 21549..22832 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| HHJ46_RS24535 () | 22835..24214 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| HHJ46_RS24540 () | 24318..24845 | - | 528 | WP_000178050.1 | iron transporter | - |
| HHJ46_RS24545 () | 24886..26772 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| HHJ46_RS24550 () | 27119..27934 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| HHJ46_RS24555 () | 28117..28623 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| HHJ46_RS24560 () | 28613..28771 | - | 159 | WP_000449408.1 | DsbA family protein | - |
| HHJ46_RS24565 () | 29232..29930 | + | 699 | Protein_36 | IS1 family transposase | - |
| HHJ46_RS24570 () | 29945..30163 | + | 219 | Protein_37 | IS4 family transposase | - |
| HHJ46_RS24575 () | 30231..30914 | - | 684 | WP_154074773.1 | IS6 family transposase IS15DI | Transposase |
| HHJ46_RS24580 () | 30972..31719 | - | 748 | Protein_39 | IS91 family transposase ISAzo26 | Transposase |
| HHJ46_RS24585 () | 31877..32350 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| HHJ46_RS24590 () | 32481..33269 | + | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| HHJ46_RS24595 () | 33475..33822 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| HHJ46_RS24600 () | 33816..34655 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| HHJ46_RS24605 () | 34783..34986 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| HHJ46_RS24610 () | 35142..36347 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| HHJ46_RS24615 () | 36358..36663 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| HHJ46_RS24620 () | 36707..36772 | + | 66 | Protein_47 | EAL domain-containing protein | - |
| HHJ46_RS24625 () | 36890..37654 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| HHJ46_RS24630 () | 38147..38731 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| HHJ46_RS24635 () | 38731..39968 | - | 1238 | Protein_50 | MFS transporter | - |
| HHJ46_RS24640 () | 39965..40869 | - | 905 | Protein_51 | hypothetical protein | ARG |
| HHJ46_RS24645 () | 41013..41695 | - | 683 | Protein_52 | IS6 family transposase IS15DI | Transposase |
| HHJ46_RS24650 () | 41756..41932 | + | 177 | Protein_53 | replication protein C | - |
| HHJ46_RS24660 () | 42240..43055 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| HHJ46_RS24665 () | 43116..43919 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HHJ46_RS24670 () | 43919..44755 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| HHJ46_RS24675 () | 44809..45053 | + | 245 | Protein_57 | relaxase | - |
| HHJ46_RS24680 () | 45085..45710 | - | 626 | Protein_58 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HHJ46_RS24685 () | 45816..47015 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| HHJ46_RS24690 () | 47047..47907 | - | 861 | WP_000493383.1 | EamA family transporter | - |
| HHJ46_RS24695 () | 47916..48422 | - | 507 | Protein_61 | transposase | - |
| HHJ46_RS24700 () | 48475..49179 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| HHJ46_RS24705 () | 49145..50507 | - | 1363 | Protein_63 | IS1182 family transposase ISCfr1 | Transposase |
| HHJ46_RS24715 () | 50622..51758 | - | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
| HHJ46_RS24720 () | 51809..52036 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| HHJ46_RS24725 () | 52060..52251 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| HHJ46_RS24730 () | 52733..53179 | - | 447 | Protein_67 | tunicamycin resistance protein | - |
| HHJ46_RS24735 () | 53243..53923 | + | 681 | Protein_68 | IS6 family transposase IS15DI | Transposase |
| HHJ46_RS24740 () | 53993..54897 | - | 905 | Protein_69 | IS4 family transposase IS10R | Transposase |
| HHJ46_RS24745 () | 55008..55971 | - | 964 | Protein_70 | IS4 family transposase IS10R | Transposase |
| HHJ46_RS24750 () | 56117..56977 | + | 861 | Protein_71 | hypothetical protein | ARG |
| HHJ46_RS25550 () | 56990..57094 | + | 105 | Protein_72 | tunicamycin resistance protein | - |
| HHJ46_RS24755 () | 57167..57849 | - | 683 | Protein_73 | IS6 family transposase | - |
| HHJ46_RS24760 () | 58149..59013 | + | 865 | Protein_74 | TEM family class A beta-lactamase | - |
| HHJ46_RS24765 () | 59165..59263 | - | 99 | Protein_75 | IS1 family transposase | - |
| HHJ46_RS24770 () | 59291..60601 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| HHJ46_RS24775 () | 60886..61287 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HHJ46_RS24780 () | 61220..61477 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HHJ46_RS24785 () | 61570..62223 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HHJ46_RS24790 () | 62321..62461 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| HHJ46_RS24795 () | 63387..63652 | - | 266 | Protein_81 | hypothetical protein | - |
| HHJ46_RS24800 () | 63781..64144 | - | 364 | Protein_82 | fertility inhibition protein FinO | - |
| HHJ46_RS25555 () | 64286..65894 | - | 1609 | Protein_83 | conjugal transfer mating pair stabilization protein TraG | - |
| HHJ46_RS25560 () | 65942..66032 | - | 91 | Protein_84 | conjugal transfer protein TraB | - |
| HHJ46_RS24820 () | 66028..66480 | - | 453 | Protein_85 | DNA methylase | - |
| HHJ46_RS24825 () | 66577..66865 | - | 289 | Protein_86 | hypothetical protein | - |
| HHJ46_RS24830 () | 66862..67764 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| HHJ46_RS24835 () | 68631..69602 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HHJ46_RS24840 () | 69602..70768 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| HHJ46_RS24845 () | 71356..72111 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HHJ46_RS24850 () | 72885..73691 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| HHJ46_RS24855 () | 73692..73997 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HHJ46_RS24860 () | 73999..74217 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HHJ46_RS24865 () | 74784..75296 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| HHJ46_RS24870 () | 75330..76463 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| HHJ46_RS24875 () | 76630..77403 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| HHJ46_RS24880 () | 77416..77916 | - | 501 | WP_000528931.1 | hypothetical protein | - |
| HHJ46_RS24885 () | 78181..78411 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| HHJ46_RS24890 () | 78408..78822 | + | 415 | Protein_99 | type II toxin-antitoxin system VapC family toxin | - |
| HHJ46_RS24895 () | 78867..82661 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| HHJ46_RS24900 () | 83042..83272 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HHJ46_RS24905 () | 83269..83685 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HHJ46_RS24910 () | 83760..85325 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| HHJ46_RS24915 () | 85310..86332 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| HHJ46_RS24920 () | 86586..87283 | - | 698 | Protein_105 | IS1 family transposase IS1S | Transposase |
| HHJ46_RS24925 () | 87663..89864 | - | 2202 | WP_000973519.1 | Ferric aerobactin receptor | VF |
| HHJ46_RS24930 () | 89946..91223 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| HHJ46_RS24935 () | 91220..92962 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| HHJ46_RS24940 () | 92962..93909 | - | 948 | WP_000011908.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| HHJ46_RS24945 () | 93910..95634 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| HHJ46_RS24950 () | 95770..96963 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| HHJ46_RS24955 () | 97343..97723 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| HHJ46_RS24960 () | 98064..98477 | - | 414 | Protein_113 | phosphopyruvate hydratase | - |
| HHJ46_RS24965 () | 98475..98732 | + | 258 | Protein_114 | Tn3 family transposase | - |
| HHJ46_RS24970 () | 98966..99823 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| HHJ46_RS24975 () | 99820..100677 | - | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| HHJ46_RS24980 () | 100674..101501 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| HHJ46_RS24985 () | 101501..102415 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| HHJ46_RS24990 () | 102771..103468 | + | 698 | Protein_119 | IS1 family transposase IS1S | Transposase |
| HHJ46_RS24995 () | 103648..104161 | - | 514 | Protein_120 | DUF4113 domain-containing protein | - |
| HHJ46_RS25565 () | 104222..104326 | - | 105 | Protein_121 | AAA family ATPase | - |
| HHJ46_RS25000 () | 104328..104651 | - | 324 | Protein_122 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|