MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86727 bp
Accession: NZ_CP051531 Location: 1..86727 Organism: Shewanella baltica strain 11FHM2 Replicon: plasmid pSBP2_mcr4
Accession: NZ_CP051531 Location: 1..86727 Organism: Shewanella baltica strain 11FHM2 Replicon: plasmid pSBP2_mcr4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHE93_RS22790 (HHE93_22875) | 1235..2623 | - | 1389 | WP_012197892.1 | conjugal transfer protein TraH | - |
| HHE93_RS22795 (HHE93_22880) | 2796..3233 | - | 438 | WP_012197893.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HHE93_RS22800 (HHE93_22885) | 3247..4122 | - | 876 | WP_259216217.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HHE93_RS22805 (HHE93_22890) | 4119..5936 | - | 1818 | WP_012197895.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HHE93_RS22810 (HHE93_22895) | 5933..6673 | - | 741 | WP_259216219.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HHE93_RS22815 (HHE93_22900) | 6696..7709 | - | 1014 | WP_259216220.1 | conjugal transfer pilus assembly protein TraU | - |
| HHE93_RS22820 (HHE93_22905) | 7696..8397 | - | 702 | WP_259216221.1 | type-F conjugative transfer system protein TraW | - |
| HHE93_RS22825 (HHE93_22910) | 8394..8765 | - | 372 | WP_259216222.1 | TrbI F-type domain-containing protein | - |
| HHE93_RS22830 (HHE93_22915) | 8767..11355 | - | 2589 | WP_012197900.1 | type IV secretion system protein TraC | - |
| HHE93_RS22835 (HHE93_22920) | 11359..11814 | - | 456 | WP_012589027.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HHE93_RS22840 (HHE93_22925) | 11835..13361 | - | 1527 | WP_012197902.1 | TrbI/VirB10 family protein | - |
| HHE93_RS22845 (HHE93_22930) | 13358..14176 | - | 819 | WP_006087324.1 | type-F conjugative transfer system secretin TraK | - |
| HHE93_RS22850 (HHE93_22935) | 14176..14742 | - | 567 | WP_012197903.1 | type IV conjugative transfer system protein TraE | - |
| HHE93_RS22855 (HHE93_22940) | 14783..15085 | - | 303 | WP_006087326.1 | type IV conjugative transfer system protein TraL | - |
| HHE93_RS22860 (HHE93_22945) | 15089..15463 | - | 375 | WP_012197904.1 | hypothetical protein | - |
| HHE93_RS22865 (HHE93_22950) | 15527..15715 | - | 189 | WP_012588990.1 | TraY domain-containing protein | - |
| HHE93_RS22870 (HHE93_22955) | 15817..16074 | - | 258 | WP_012197905.1 | hypothetical protein | - |
| HHE93_RS22875 (HHE93_22960) | 16194..16376 | + | 183 | WP_012197906.1 | hypothetical protein | - |
| HHE93_RS22880 (HHE93_22965) | 16823..17554 | + | 732 | WP_012197907.1 | hypothetical protein | - |
| HHE93_RS22885 (HHE93_22970) | 18216..18443 | - | 228 | WP_014358140.1 | hypothetical protein | - |
| HHE93_RS22890 (HHE93_22975) | 18612..19811 | + | 1200 | WP_259216226.1 | Sporulation initiation inhibitor protein Soj | VF |
| HHE93_RS22895 (HHE93_22980) | 19811..20908 | + | 1098 | WP_259216227.1 | ParB family protein | - |
| HHE93_RS22900 (HHE93_22985) | 21410..22711 | + | 1302 | WP_259216229.1 | hypothetical protein | - |
| HHE93_RS22905 (HHE93_22990) | 22788..23675 | + | 888 | WP_259216230.1 | hypothetical protein | - |
| HHE93_RS22910 (HHE93_22995) | 24043..24627 | - | 585 | WP_259216231.1 | hypothetical protein | - |
| HHE93_RS22915 (HHE93_23000) | 24852..25238 | + | 387 | WP_259216232.1 | IS607 family transposase ISChh1 | Transposase |
| HHE93_RS22925 (HHE93_23015) | 27005..27352 | + | 348 | WP_058689194.1 | mercuric transporter MerT family protein | - |
| HHE93_RS22930 (HHE93_23020) | 27387..27671 | + | 285 | WP_069455589.1 | mercury resistance system periplasmic binding protein MerP | - |
| HHE93_RS22935 (HHE93_23025) | 27679..29334 | + | 1656 | WP_069455588.1 | mercury(II) reductase | - |
| HHE93_RS22940 (HHE93_23030) | 29365..29916 | - | 552 | WP_058689192.1 | Tn3 family transposase ISEc63 | Transposase |
| HHE93_RS22945 (HHE93_23035) | 30083..30880 | + | 798 | Protein_32 | Tn3 family transposase TnpA_Tn3 | Transposase |
| HHE93_RS22950 (HHE93_23040) | 30930..34016 | - | 3087 | WP_011638896.1 | Tn3 family transposase ISPsy42 | Transposase |
| HHE93_RS22955 (HHE93_23045) | 34040..34351 | - | 312 | WP_011638897.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HHE93_RS22960 (HHE93_23050) | 34351..34611 | - | 261 | WP_011638898.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HHE93_RS22965 (HHE93_23055) | 34879..35382 | + | 504 | Protein_36 | Tn3 family transposase | - |
| HHE93_RS22970 (HHE93_23060) | 35421..35828 | + | 408 | WP_254155576.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| HHE93_RS22975 (HHE93_23065) | 35860..36768 | + | 909 | WP_011919296.1 | cation diffusion facilitator family transporter | - |
| HHE93_RS22980 (HHE93_23070) | 36770..37096 | + | 327 | WP_008224334.1 | YnfA family protein | - |
| HHE93_RS22985 (HHE93_23075) | 37240..37587 | - | 348 | WP_058689194.1 | mercuric transporter MerT family protein | - |
| HHE93_RS22990 (HHE93_23080) | 37665..38066 | - | 402 | WP_069455590.1 | IS607 family transposase ISChh1 | Transposase |
| HHE93_RS22995 (HHE93_23085) | 38174..38347 | + | 174 | Protein_42 | recombinase family protein | - |
| HHE93_RS23000 (HHE93_23090) | 38521..40146 | + | 1626 | WP_011638903.1 | Phosphoethanolamine transferase EptA | VF |
| HHE93_RS23005 (HHE93_23095) | 40877..41746 | + | 870 | WP_259216242.1 | integrase domain-containing protein | - |
| HHE93_RS23010 (HHE93_23100) | 41795..41935 | + | 141 | WP_259216243.1 | hypothetical protein | - |
| HHE93_RS23015 (HHE93_23105) | 41932..42129 | - | 198 | WP_259216244.1 | hypothetical protein | - |
| HHE93_RS23020 (HHE93_23110) | 42247..42501 | + | 255 | WP_259216245.1 | hypothetical protein | - |
| HHE93_RS23025 (HHE93_23115) | 42563..42847 | - | 285 | WP_037424368.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HHE93_RS23030 (HHE93_23120) | 42837..43076 | - | 240 | WP_259216246.1 | CopG family ribbon-helix-helix protein | - |
| HHE93_RS23035 (HHE93_23125) | 43448..44005 | + | 558 | WP_259216190.1 | hypothetical protein | - |
| HHE93_RS23040 (HHE93_23130) | 44144..44752 | + | 609 | WP_259216191.1 | type VI secretion protein | - |
| HHE93_RS23045 (HHE93_23135) | 44866..45438 | + | 573 | WP_259216193.1 | hypothetical protein | - |
| HHE93_RS23050 (HHE93_23140) | 45682..46311 | - | 630 | WP_011979483.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HHE93_RS23055 (HHE93_23145) | 46647..47900 | - | 1254 | WP_259216194.1 | GIY-YIG nuclease family protein | - |
| HHE93_RS23060 (HHE93_23150) | 47916..49964 | - | 2049 | WP_259216248.1 | helicase-related protein | - |
| HHE93_RS23065 (HHE93_23155) | 49957..52644 | - | 2688 | WP_259216195.1 | N-6 DNA methylase | - |
| HHE93_RS23070 (HHE93_23165) | 53329..53574 | + | 246 | WP_259216196.1 | hypothetical protein | - |
| HHE93_RS23075 (HHE93_23170) | 54028..54462 | + | 435 | WP_219255657.1 | S24 family peptidase | - |
| HHE93_RS23080 (HHE93_23175) | 54450..55706 | + | 1257 | WP_259216199.1 | Y-family DNA polymerase | - |
| HHE93_RS23085 (HHE93_23180) | 55880..56284 | + | 405 | WP_259216200.1 | hypothetical protein | - |
| HHE93_RS23090 (HHE93_23185) | 56429..57094 | + | 666 | WP_006087356.1 | site-specific integrase | - |
| HHE93_RS23095 (HHE93_23190) | 57153..57329 | + | 177 | WP_193377977.1 | hypothetical protein | - |
| HHE93_RS23100 (HHE93_23195) | 57344..57634 | + | 291 | WP_006087357.1 | hypothetical protein | - |
| HHE93_RS23105 (HHE93_23200) | 58047..58778 | + | 732 | WP_259216201.1 | endonuclease | - |
| HHE93_RS23110 (HHE93_23205) | 58793..59026 | + | 234 | WP_006087359.1 | hypothetical protein | - |
| HHE93_RS23115 (HHE93_23210) | 59419..61293 | + | 1875 | WP_259216202.1 | ParB/RepB/Spo0J family partition protein | - |
| HHE93_RS23120 (HHE93_23215) | 61418..61873 | + | 456 | WP_014615256.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| HHE93_RS23125 (HHE93_23220) | 61875..62363 | + | 489 | WP_220774012.1 | hypothetical protein | - |
| HHE93_RS23130 (HHE93_23225) | 62394..62615 | + | 222 | WP_014615254.1 | hypothetical protein | - |
| HHE93_RS23135 (HHE93_23230) | 63286..63909 | + | 624 | WP_220774014.1 | hypothetical protein | - |
| HHE93_RS23140 (HHE93_23235) | 63926..64312 | + | 387 | WP_259216204.1 | hypothetical protein | - |
| HHE93_RS23145 (HHE93_23240) | 64509..64754 | + | 246 | WP_006087375.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HHE93_RS23150 (HHE93_23245) | 64754..65089 | + | 336 | WP_006087376.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HHE93_RS23155 (HHE93_23250) | 65693..66694 | + | 1002 | WP_259216206.1 | zincin-like metallopeptidase domain-containing protein | - |
| HHE93_RS23160 (HHE93_23255) | 66735..67046 | + | 312 | WP_259216207.1 | hypothetical protein | - |
| HHE93_RS23165 (HHE93_23260) | 67400..68530 | + | 1131 | WP_014615249.1 | site-specific integrase | - |
| HHE93_RS23170 (HHE93_23265) | 68632..69882 | + | 1251 | WP_259216249.1 | site-specific integrase | - |
| HHE93_RS23175 (HHE93_23270) | 70279..71508 | + | 1230 | WP_259216208.1 | AAA family ATPase | - |
| HHE93_RS23180 (HHE93_23275) | 71501..72016 | + | 516 | WP_259216209.1 | hypothetical protein | - |
| HHE93_RS23185 | 72153..72365 | + | 213 | WP_259216250.1 | Tn3 family transposase TnpR_ISNpu13 | Transposase |
| HHE93_RS23190 (HHE93_23285) | 72627..74492 | - | 1866 | WP_259216210.1 | retron Ec67 family RNA-directed DNA polymerase/endonuclease | - |
| HHE93_RS23195 (HHE93_23290) | 75854..76213 | + | 360 | WP_006087379.1 | hypothetical protein | - |
| HHE93_RS23200 (HHE93_23295) | 76234..82194 | - | 5961 | WP_259216211.1 | Multifunctional conjugation protein TraI | Relaxase |
| HHE93_RS23205 (HHE93_23300) | 82253..82432 | - | 180 | WP_041411649.1 | thyroid hormone receptor interactor 11-like protein | - |
| HHE93_RS23210 (HHE93_23305) | 82446..84572 | - | 2127 | WP_259216213.1 | type IV conjugative transfer system coupling protein TraD | - |
| HHE93_RS23215 (HHE93_23310) | 84575..85108 | - | 534 | WP_012197888.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|