MGE detailed information
MGE type: Genomic_island MGE length: 36086 bp
Accession: NZ_CP051429 Location: 984842..1020927 Organism: Dickeya dianthicola strain 67-19 Replicon: chromosome
Accession: NZ_CP051429 Location: 984842..1020927 Organism: Dickeya dianthicola strain 67-19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HGI48_RS04665 () | 981211..981606 | + | 396 | WP_024104803.1 | helix-turn-helix transcriptional regulator | - |
| HGI48_RS04670 () | 981829..981960 | - | 132 | Protein_909 | transposase | - |
| HGI48_RS04675 () | 982261..983001 | - | 741 | WP_024104804.1 | alpha/beta hydrolase | - |
| HGI48_RS04680 () | 984842..985567 | + | 726 | WP_192990487.1 | Expansin-YoaJ | - |
| HGI48_RS04685 () | 985638..986585 | + | 948 | WP_192990488.1 | glycoside hydrolase family 5 protein | - |
| HGI48_RS04690 () | 986697..986858 | - | 162 | WP_161132386.1 | CcdB family protein | - |
| HGI48_RS04695 () | 986867..987004 | - | 138 | Protein_914 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HGI48_RS04700 () | 987515..988168 | - | 654 | WP_192990489.1 | RES family NAD+ phosphorylase | - |
| HGI48_RS04705 () | 988161..988880 | - | 720 | WP_192990490.1 | hypothetical protein | - |
| HGI48_RS04710 () | 989158..989451 | + | 294 | WP_192990491.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HGI48_RS04715 () | 989448..989942 | + | 495 | WP_192991409.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HGI48_RS04720 () | 990158..990442 | + | 285 | WP_168640622.1 | hypothetical protein | - |
| HGI48_RS04725 () | 990445..990563 | + | 119 | Protein_920 | HTH domain-containing protein | - |
| HGI48_RS04730 () | 991378..992454 | + | 1077 | WP_192990492.1 | IS630 family transposase ISEc40 | Transposase |
| HGI48_RS04735 () | 992485..993561 | + | 1077 | WP_192990493.1 | hypothetical protein | - |
| HGI48_RS04740 () | 993581..994276 | + | 696 | WP_192990494.1 | HAD family hydrolase | - |
| HGI48_RS04745 () | 994273..995142 | + | 870 | WP_192990495.1 | hypothetical protein | - |
| HGI48_RS04750 () | 995147..995938 | + | 792 | WP_192990496.1 | hypothetical protein | - |
| HGI48_RS04755 () | 995935..996981 | + | 1047 | WP_168640616.1 | phosphotransferase | - |
| HGI48_RS04760 () | 997077..999779 | + | 2703 | WP_192990497.1 | hypothetical protein | - |
| HGI48_RS04765 () | 1000011..1000655 | + | 645 | WP_192990498.1 | hypothetical protein | - |
| HGI48_RS04770 () | 1000723..1000968 | + | 246 | WP_192990499.1 | acyl carrier protein | - |
| HGI48_RS04775 () | 1001039..1002079 | + | 1041 | WP_192990500.1 | nucleotidyltransferase family protein | - |
| HGI48_RS04780 () | 1002188..1003327 | + | 1140 | WP_192990501.1 | acyl-CoA dehydrogenase family protein | - |
| HGI48_RS04785 () | 1003392..1005242 | + | 1851 | WP_192990502.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| HGI48_RS04790 () | 1005270..1007048 | + | 1779 | WP_192990503.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| HGI48_RS04795 () | 1007114..1007863 | + | 750 | WP_192990504.1 | hypothetical protein | - |
| HGI48_RS04800 () | 1007853..1009073 | + | 1221 | WP_192990505.1 | hypothetical protein | - |
| HGI48_RS04805 () | 1009191..1009758 | + | 568 | Protein_936 | IS256 family transposase ISSod4 | Transposase |
| HGI48_RS04810 () | 1009770..1010543 | - | 774 | WP_192990506.1 | IS110 family transposase ISMex9 | Transposase |
| HGI48_RS04815 () | 1010594..1011100 | - | 507 | Protein_938 | transposase | - |
| HGI48_RS04820 () | 1011204..1011509 | - | 306 | WP_192990507.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HGI48_RS04825 () | 1011512..1011730 | - | 219 | WP_192990508.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HGI48_RS04830 () | 1011789..1012532 | - | 744 | WP_192990509.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HGI48_RS04835 () | 1013444..1013785 | - | 342 | WP_192990510.1 | hypothetical protein | - |
| HGI48_RS04840 () | 1013971..1014165 | + | 195 | WP_192990511.1 | DUF3950 domain-containing protein | - |
| HGI48_RS04845 () | 1014094..1014555 | - | 462 | Protein_944 | integrase family protein | - |
| HGI48_RS04850 () | 1015358..1016359 | + | 1002 | WP_192990512.1 | DUF2971 domain-containing protein | - |
| HGI48_RS04855 () | 1016755..1018548 | - | 1794 | WP_192990513.1 | AAA family ATPase | - |
| HGI48_RS04860 () | 1018650..1018910 | - | 261 | WP_192990514.1 | DUF4400 domain-containing protein | - |
| HGI48_RS04865 () | 1018940..1019686 | - | 747 | WP_192990515.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HGI48_RS04870 () | 1020586..1020927 | - | 342 | WP_192990516.1 | hypothetical protein | - |
| HGI48_RS04875 () | 1021068..1021238 | + | 171 | WP_164669135.1 | hypothetical protein | - |
| HGI48_RS04880 () | 1021380..1022639 | - | 1260 | WP_192990517.1 | integrase arm-type DNA-binding domain-containing protein | - |
| HGI48_RS04890 () | 1023542..1025695 | + | 2154 | WP_192990518.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|