MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95919 bp
Accession: NZ_CP051406 Location: 1..95919 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CVM 20762 Replicon: plasmid p20762-2
Accession: NZ_CP051406 Location: 1..95919 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CVM 20762 Replicon: plasmid p20762-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFQ58_RS23790 () | 1..765 | + | 765 | WP_001246548.1 | membrane protein | - |
| HFQ58_RS23795 () | 1261..1695 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| HFQ58_RS23800 () | 1762..2196 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| HFQ58_RS23805 () | 2432..2755 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| HFQ58_RS23810 () | 3456..3974 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| HFQ58_RS23815 () | 4029..4271 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| HFQ58_RS23820 () | 4340..6337 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| HFQ58_RS23825 () | 6377..6811 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| HFQ58_RS23830 () | 6808..7545 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| HFQ58_RS23835 () | 7794..7952 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| HFQ58_RS23840 () | 8055..8873 | + | 819 | Protein_10 | DUF945 domain-containing protein | - |
| HFQ58_RS23845 () | 9184..9654 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| HFQ58_RS23850 () | 10069..10449 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| HFQ58_RS23855 () | 10642..11328 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| HFQ58_RS23860 () | 11422..11649 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| HFQ58_RS23865 () | 11691..12053 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| HFQ58_RS23870 () | 12068..12379 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| HFQ58_RS23875 () | 12401..12967 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| HFQ58_RS23880 () | 12954..13694 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| HFQ58_RS23885 () | 13694..15115 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| HFQ58_RS23890 () | 15105..15701 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| HFQ58_RS23895 () | 15679..15924 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| HFQ58_RS23900 () | 15921..16436 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HFQ58_RS23905 () | 16571..16792 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| HFQ58_RS23910 () | 16785..17252 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| HFQ58_RS23915 () | 17369..17632 | + | 264 | WP_001239255.1 | hypothetical protein | - |
| HFQ58_RS23920 () | 17648..20296 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| HFQ58_RS23925 () | 20271..20657 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| HFQ58_RS23930 () | 20654..21286 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| HFQ58_RS23935 () | 21283..22275 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| HFQ58_RS23940 () | 22294..22602 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| HFQ58_RS23945 () | 22587..23225 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HFQ58_RS23950 () | 23262..23681 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| HFQ58_RS23955 () | 23678..25504 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HFQ58_RS23960 () | 25515..25730 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| HFQ58_RS23965 () | 25742..26491 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HFQ58_RS23970 () | 26705..26998 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HFQ58_RS23975 () | 26985..27533 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HFQ58_RS23980 () | 27523..28905 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| HFQ58_RS23985 () | 28902..31724 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HFQ58_RS23990 () | 31740..32234 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| HFQ58_RS23995 () | 32270..33001 | + | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| HFQ58_RS24000 () | 33378..35540 | + | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| HFQ58_RS24005 () | 35549..35947 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HFQ58_RS24010 () | 35947..36174 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HFQ58_RS24015 () | 36256..41514 | + | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| HFQ58_RS24020 () | 41534..42274 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| HFQ58_RS24025 () | 42329..42892 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| HFQ58_RS24030 () | 43007..43291 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| HFQ58_RS24035 () | 43304..43459 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| HFQ58_RS24040 () | 43625..44066 | + | 442 | Protein_50 | phospholipase | - |
| HFQ58_RS24045 () | 44245..44511 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| HFQ58_RS24050 () | 44761..44838 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| HFQ58_RS24055 () | 44819..45700 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| HFQ58_RS24060 () | 46560..46781 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| HFQ58_RS24065 () | 46878..47635 | - | 758 | Protein_55 | AraC family transcriptional regulator | - |
| HFQ58_RS24070 () | 47902..48459 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| HFQ58_RS24075 () | 48549..48689 | - | 141 | WP_000052148.1 | SdiA-regulated domain-containing protein | - |
| HFQ58_RS24080 () | 48734..48874 | + | 141 | WP_000052148.1 | SdiA-regulated domain-containing protein | - |
| HFQ58_RS24085 () | 48971..49728 | - | 758 | Protein_59 | AraC family transcriptional regulator | - |
| HFQ58_RS24090 () | 49995..50552 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| HFQ58_RS24095 () | 50642..51541 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| HFQ58_RS24100 () | 51538..51684 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| HFQ58_RS24105 () | 51674..52327 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| HFQ58_RS24110 () | 52572..52922 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| HFQ58_RS24115 () | 52907..53119 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| HFQ58_RS24120 () | 53551..54426 | - | 876 | WP_199275671.1 | hypothetical protein | - |
| HFQ58_RS24125 () | 54679..55236 | - | 558 | WP_010999940.1 | membrane protein | - |
| HFQ58_RS24130 () | 55251..55943 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| HFQ58_RS24135 () | 55936..58344 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| HFQ58_RS24140 () | 58572..59090 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| HFQ58_RS24145 () | 59365..59667 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| HFQ58_RS24150 () | 60386..60767 | + | 382 | Protein_72 | YgiW/YdeI family stress tolerance OB fold protein | - |
| HFQ58_RS24155 () | 60936..61380 | + | 445 | Protein_73 | site-specific integrase | - |
| HFQ58_RS24160 () | 61639..62628 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| HFQ58_RS24165 () | 63122..63418 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| HFQ58_RS24170 () | 63902..64423 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| HFQ58_RS24175 () | 65099..65317 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HFQ58_RS24180 () | 65319..65624 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HFQ58_RS24185 () | 65626..65916 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| HFQ58_RS24190 () | 65913..66434 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| HFQ58_RS24195 () | 66469..67251 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| HFQ58_RS24200 () | 67260..67973 | + | 714 | Protein_82 | EAL domain-containing protein | - |
| HFQ58_RS24205 () | 67977..68486 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| HFQ58_RS24210 () | 68480..68965 | + | 486 | WP_000905606.1 | membrane protein | - |
| HFQ58_RS24215 () | 69242..69529 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| HFQ58_RS24220 () | 69685..70245 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| HFQ58_RS24225 () | 70312..70662 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| HFQ58_RS24230 () | 70719..71143 | + | 425 | Protein_88 | IS200/IS605 family transposase | - |
| HFQ58_RS24235 () | 71270..71920 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| HFQ58_RS24240 () | 72181..72906 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| HFQ58_RS24245 () | 73186..74961 | - | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| HFQ58_RS24250 () | 75013..75180 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| HFQ58_RS24255 () | 75143..75910 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| HFQ58_RS24260 () | 76084..76248 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| HFQ58_RS24265 () | 76422..77315 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| HFQ58_RS24270 () | 77923..78960 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| HFQ58_RS24275 () | 79148..80173 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| HFQ58_RS24280 () | 80106..81770 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| HFQ58_RS24285 () | 81754..82314 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| HFQ58_RS24290 () | 82521..83261 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| HFQ58_RS24295 () | 83916..84404 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| HFQ58_RS24300 () | 84663..85778 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| HFQ58_RS24305 () | 85864..86280 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| HFQ58_RS24310 () | 86464..86799 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| HFQ58_RS24315 () | 86856..87422 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| HFQ58_RS24320 () | 87454..88395 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HFQ58_RS24325 () | 88810..90015 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| HFQ58_RS24330 () | 90015..90989 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| HFQ58_RS24335 () | 91071..92345 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| HFQ58_RS24340 () | 92345..92767 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HFQ58_RS24345 () | 93278..93748 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| HFQ58_RS24350 () | 93741..94097 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| HFQ58_RS24355 () | 94479..95158 | + | 680 | Protein_113 | DNA methylase | - |
| HFQ58_RS24360 () | 95158..95379 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| HFQ58_RS24365 () | 95435..95848 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|