MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 99003 bp
Accession: NZ_CP051405 Location: 1..99003 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CVM 20762 Replicon: plasmid p20762-1
Accession: NZ_CP051405 Location: 1..99003 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain CVM 20762 Replicon: plasmid p20762-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFQ58_RS23230 () | 1..528 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| HFQ58_RS23235 () | 586..819 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| HFQ58_RS23240 () | 878..2836 | + | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| HFQ58_RS23245 () | 2891..3325 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| HFQ58_RS23250 () | 3322..4041 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| HFQ58_RS23255 () | 4171..5346 | + | 1176 | WP_000942657.1 | transposase | - |
| HFQ58_RS23260 () | 5793..6293 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| HFQ58_RS23265 () | 7022..7456 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| HFQ58_RS23270 () | 7550..7816 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| HFQ58_RS23275 () | 7881..8783 | + | 903 | WP_000038404.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HFQ58_RS23280 () | 8783..9064 | + | 282 | WP_001334682.1 | hypothetical protein | - |
| HFQ58_RS23285 () | 9095..9346 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| HFQ58_RS23290 () | 9927..10775 | + | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| HFQ58_RS23295 () | 10861..11196 | - | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HFQ58_RS23300 () | 11430..11762 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HFQ58_RS23305 () | 11773..14472 | + | 2700 | WP_001474686.1 | IncI1-type relaxase NikB | - |
| HFQ58_RS23310 () | 14509..16800 | - | 2292 | WP_001289271.1 | hypothetical protein | - |
| HFQ58_RS23315 () | 16793..17863 | - | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| HFQ58_RS23320 () | 17882..19090 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| HFQ58_RS23325 () | 19382..19534 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| HFQ58_RS23330 () | 19606..19857 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| HFQ58_RS23335 () | 20218..21000 | - | 783 | WP_077769233.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| HFQ58_RS23340 () | 20997..22019 | - | 1023 | WP_001572805.1 | IS21-like element IS100 family transposase | - |
| HFQ58_RS23345 () | 22740..22916 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| HFQ58_RS23350 () | 23308..23517 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| HFQ58_RS23355 () | 23589..24251 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HFQ58_RS23360 () | 24322..26490 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| HFQ58_RS23365 () | 26587..27171 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| HFQ58_RS23370 () | 27200..28402 | - | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| HFQ58_RS23375 () | 28369..28983 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| HFQ58_RS23380 () | 28983..32027 | - | 3045 | WP_001024751.1 | IncI1-type conjugal transfer protein TraU | - |
| HFQ58_RS23385 () | 32117..32917 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HFQ58_RS23390 () | 32901..33089 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HFQ58_RS23395 () | 33153..33557 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| HFQ58_RS23400 () | 33608..34135 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HFQ58_RS23405 () | 34135..34839 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HFQ58_RS23410 () | 34839..36128 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| HFQ58_RS23415 () | 36131..37114 | - | 984 | WP_001191878.1 | IncI1-type conjugal transfer protein TraN | - |
| HFQ58_RS23420 () | 37125..37817 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| HFQ58_RS23425 () | 37814..38161 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HFQ58_RS23430 () | 38179..41946 | - | 3768 | WP_001141535.1 | hypothetical protein | - |
| HFQ58_RS23435 () | 42036..42587 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| HFQ58_RS23440 () | 42602..42892 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| HFQ58_RS23445 () | 42889..44037 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| HFQ58_RS23450 () | 44034..44852 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| HFQ58_RS23455 () | 44849..45307 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HFQ58_RS23460 () | 45702..46286 | - | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| HFQ58_RS23465 () | 46346..47548 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| HFQ58_RS23470 () | 47634..48458 | - | 825 | WP_001238927.1 | hypothetical protein | - |
| HFQ58_RS23475 () | 48609..49763 | - | 1155 | WP_001139958.1 | integrase | - |
| HFQ58_RS23480 () | 50362..50559 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| HFQ58_RS23485 () | 50703..51995 | - | 1293 | WP_032274560.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HFQ58_RS23490 () | 51995..52651 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| HFQ58_RS23495 () | 52636..53196 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| HFQ58_RS23500 () | 53206..53820 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| HFQ58_RS23505 () | 53838..54935 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| HFQ58_RS23510 () | 54948..56501 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| HFQ58_RS23515 () | 56512..56964 | - | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| HFQ58_RS23520 () | 56951..58246 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| HFQ58_RS23525 () | 58239..59921 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| HFQ58_RS23530 () | 59935..60372 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| HFQ58_RS23535 () | 60372..61439 | - | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| HFQ58_RS23540 () | 62113..62565 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| HFQ58_RS23545 () | 62608..62862 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| HFQ58_RS23550 () | 63130..63696 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| HFQ58_RS23555 () | 63710..64393 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| HFQ58_RS23560 () | 64647..65180 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| HFQ58_RS23565 () | 65622..65909 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HFQ58_RS23570 () | 65827..66090 | - | 264 | WP_001324596.1 | ash family protein | - |
| HFQ58_RS23575 () | 67063..68094 | + | 1032 | WP_000907873.1 | replication initiation protein | - |
| HFQ58_RS23580 () | 69003..69272 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HFQ58_RS23585 () | 69269..69550 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HFQ58_RS23590 () | 69590..70438 | + | 849 | WP_001057991.1 | 3'-5' exonuclease | - |
| HFQ58_RS23595 () | 70555..71028 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| HFQ58_RS23600 () | 71505..71771 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| HFQ58_RS23605 () | 71771..72265 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| HFQ58_RS23610 () | 72321..72923 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| HFQ58_RS23615 () | 73277..74161 | + | 885 | Protein_77 | hypothetical protein | - |
| HFQ58_RS23620 () | 74344..75606 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| HFQ58_RS23625 () | 75930..77075 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| HFQ58_RS23630 () | 77169..77702 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| HFQ58_RS23635 () | 77699..78016 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HFQ58_RS23640 () | 78068..78538 | + | 471 | Protein_82 | hypothetical protein | - |
| HFQ58_RS23645 () | 78817..80697 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| HFQ58_RS23650 () | 80715..81062 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| HFQ58_RS23655 () | 81181..81528 | + | 348 | WP_000142436.1 | hypothetical protein | - |
| HFQ58_RS23660 () | 81546..82136 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| HFQ58_RS23665 () | 82136..82390 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| HFQ58_RS23670 () | 82742..83743 | + | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| HFQ58_RS23675 () | 83919..84263 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| HFQ58_RS23680 () | 84762..85016 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| HFQ58_RS23685 () | 85061..85987 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| HFQ58_RS23690 () | 86545..86763 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HFQ58_RS23695 () | 86765..87070 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HFQ58_RS23700 () | 87071..87877 | + | 807 | WP_000016969.1 | site-specific integrase | - |
| HFQ58_RS23705 () | 88057..88701 | + | 645 | WP_001144036.1 | ParA family protein | - |
| HFQ58_RS23710 () | 88788..89096 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| HFQ58_RS23715 () | 89510..90490 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HFQ58_RS23720 () | 90483..90899 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HFQ58_RS23725 () | 90901..92175 | - | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| HFQ58_RS23730 () | 92175..92612 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HFQ58_RS23735 () | 92609..92857 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| HFQ58_RS23740 () | 93275..94177 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| HFQ58_RS23745 () | 94174..94485 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| HFQ58_RS23750 () | 94562..95245 | + | 684 | WP_000086178.1 | DNA methylase | - |
| HFQ58_RS23755 () | 95246..95467 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| HFQ58_RS23760 () | 95479..95913 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| HFQ58_RS23765 () | 95964..96734 | + | 771 | WP_024133193.1 | hypothetical protein | - |
| HFQ58_RS23770 () | 97152..97577 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| HFQ58_RS23775 () | 97624..98046 | + | 423 | WP_000271725.1 | DUF1380 family protein | - |
| HFQ58_RS23780 () | 98043..98234 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| HFQ58_RS23785 () | 98567..98635 | - | 69 | Protein_111 | pilus protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|