MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 136285 bp
Accession: NZ_CP051369 Location: 1..136285 Organism: Salmonella enterica subsp. houtenae serovar 43:z4 strain CVM 24399 Replicon: plasmid p24399
Accession: NZ_CP051369 Location: 1..136285 Organism: Salmonella enterica subsp. houtenae serovar 43:z4 strain CVM 24399 Replicon: plasmid p24399
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFS24_RS22390 (HFS24_22340) | 1..564 | + | 564 | WP_219827477.1 | type IV conjugative transfer system protein TraE | - |
| HFS24_RS22395 (HFS24_22345) | 554..1294 | + | 741 | WP_219827478.1 | type-F conjugative transfer system secretin TraK | - |
| HFS24_RS22400 (HFS24_22350) | 1281..2642 | + | 1362 | WP_219827479.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| HFS24_RS22405 (HFS24_22355) | 2754..2978 | + | 225 | WP_219827480.1 | TraR/DksA C4-type zinc finger protein | - |
| HFS24_RS22410 (HFS24_22360) | 2982..3161 | + | 180 | WP_219827481.1 | hypothetical protein | - |
| HFS24_RS22415 (HFS24_22365) | 3246..3686 | + | 441 | WP_258169269.1 | hypothetical protein | - |
| HFS24_RS22420 (HFS24_22370) | 3704..4282 | + | 579 | WP_219827483.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HFS24_RS22425 (HFS24_22375) | 4293..6884 | + | 2592 | WP_219827484.1 | type IV secretion system protein TraC | - |
| HFS24_RS22430 (HFS24_22380) | 6881..7330 | + | 450 | WP_219827485.1 | type-F conjugative transfer system protein TrbI | - |
| HFS24_RS22435 (HFS24_22385) | 7330..7965 | + | 636 | WP_219827486.1 | type-F conjugative transfer system protein TraW | - |
| HFS24_RS22440 (HFS24_22390) | 7962..8948 | + | 987 | WP_219827487.1 | conjugal transfer pilus assembly protein TraU | - |
| HFS24_RS22445 (HFS24_22395) | 8967..9581 | + | 615 | WP_219827488.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HFS24_RS22450 (HFS24_22400) | 9578..11407 | + | 1830 | WP_219827489.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HFS24_RS22455 (HFS24_22405) | 11404..12180 | + | 777 | WP_219827490.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HFS24_RS22460 (HFS24_22410) | 12205..12816 | + | 612 | WP_219827491.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HFS24_RS22465 (HFS24_22415) | 12816..14177 | + | 1362 | WP_219827492.1 | conjugal transfer pilus assembly protein TraH | - |
| HFS24_RS22470 (HFS24_22420) | 14179..17076 | + | 2898 | WP_219827493.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| HFS24_RS22475 (HFS24_22425) | 17088..17648 | + | 561 | WP_219827494.1 | protein traS | - |
| HFS24_RS22480 (HFS24_22430) | 17822..18559 | + | 738 | WP_219827495.1 | conjugal transfer complement resistance protein TraT | - |
| HFS24_RS22485 (HFS24_22435) | 18709..20949 | + | 2241 | WP_219827496.1 | type IV conjugative transfer system coupling protein TraD | - |
| HFS24_RS22490 (HFS24_22440) | 20949..26240 | + | 5292 | WP_219827497.1 | Multifunctional conjugation protein TraI | Relaxase |
| HFS24_RS22495 (HFS24_22445) | 26259..26825 | + | 567 | WP_219827498.1 | DUF2726 domain-containing protein | - |
| HFS24_RS22500 (HFS24_22450) | 26822..27553 | + | 732 | WP_219827499.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| HFS24_RS22505 (HFS24_22455) | 27594..27797 | + | 204 | WP_219827500.1 | hypothetical protein | - |
| HFS24_RS22510 (HFS24_22460) | 27794..28126 | + | 333 | WP_219827501.1 | hypothetical protein | - |
| HFS24_RS22515 (HFS24_22465) | 28123..28431 | + | 309 | WP_015405814.1 | hypothetical protein | - |
| HFS24_RS22520 (HFS24_22470) | 28493..29497 | + | 1005 | WP_219827502.1 | hypothetical protein | - |
| HFS24_RS22525 (HFS24_22475) | 29605..30168 | + | 564 | WP_219827503.1 | Phospholipase D | VF |
| HFS24_RS22530 (HFS24_22480) | 30299..30535 | + | 237 | WP_023972288.1 | replication regulatory protein RepA | - |
| HFS24_RS22535 (HFS24_22485) | 30781..30858 | + | 78 | WP_032489431.1 | RepA leader peptide Tap | - |
| HFS24_RS22540 (HFS24_22490) | 30839..31732 | + | 894 | WP_219827504.1 | incFII family plasmid replication initiator RepA | - |
| HFS24_RS22545 (HFS24_22495) | 32747..33058 | + | 312 | Protein_31 | hypothetical protein | - |
| HFS24_RS22550 (HFS24_22500) | 33173..33772 | + | 600 | WP_219827506.1 | hypothetical protein | - |
| HFS24_RS22555 (HFS24_22505) | 33819..34475 | + | 657 | Protein_33 | IS91 family transposase ISSbo1 | Transposase |
| HFS24_RS22560 (HFS24_22510) | 34895..35089 | + | 195 | Protein_34 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HFS24_RS22565 (HFS24_22515) | 35544..36227 | - | 684 | WP_219827507.1 | outer membrane beta-barrel protein | - |
| HFS24_RS22570 (HFS24_22520) | 36234..36731 | - | 498 | WP_219827508.1 | heme-binding protein | - |
| HFS24_RS22575 (HFS24_22525) | 36827..37444 | - | 618 | WP_219827509.1 | Transcriptional regulatory protein TdiR | VF |
| HFS24_RS22580 (HFS24_22530) | 37444..38760 | - | 1317 | WP_219827510.1 | ATP-binding protein | - |
| HFS24_RS22585 (HFS24_22535) | 39105..39635 | - | 531 | Protein_39 | IS91 family transposase IS1294 | Transposase |
| HFS24_RS22590 (HFS24_22540) | 39682..40275 | - | 594 | WP_219827511.1 | hypothetical protein | - |
| HFS24_RS22595 (HFS24_22545) | 41037..42143 | - | 1107 | WP_258169270.1 | hypothetical protein | VF |
| HFS24_RS22600 (HFS24_22550) | 42214..45948 | - | 3735 | WP_219827513.1 | hypothetical protein | - |
| HFS24_RS22605 (HFS24_22555) | 46088..46213 | - | 126 | Protein_43 | IS3 family transposase | - |
| HFS24_RS22610 (HFS24_22560) | 46659..47255 | + | 597 | WP_219827514.1 | hypothetical protein | - |
| HFS24_RS22615 (HFS24_22565) | 47473..47727 | - | 255 | WP_219827515.1 | CcdB family protein | - |
| HFS24_RS22620 (HFS24_22570) | 47874..48911 | - | 1038 | WP_258169271.1 | DUF4158 domain-containing protein | - |
| HFS24_RS22625 (HFS24_22575) | 49017..49418 | + | 402 | WP_219827516.1 | PPC domain-containing protein | - |
| HFS24_RS22630 (HFS24_22580) | 50051..51284 | - | 1234 | Protein_48 | IS3 family transposase ISKpn38 | Transposase |
| HFS24_RS22635 (HFS24_22585) | 51329..51583 | + | 255 | WP_258169275.1 | DUF3085 domain-containing protein | - |
| HFS24_RS22640 (HFS24_22590) | 51678..51944 | - | 267 | WP_023240809.1 | hypothetical protein | - |
| HFS24_RS22645 (HFS24_22595) | 52006..52461 | - | 456 | WP_219827518.1 | DUF302 domain-containing protein | - |
| HFS24_RS22650 (HFS24_22600) | 52631..53436 | - | 806 | Protein_52 | MFS transporter | - |
| HFS24_RS22655 (HFS24_22605) | 53754..54347 | - | 594 | WP_219827519.1 | hypothetical protein | - |
| HFS24_RS22660 (HFS24_22610) | 54545..54721 | - | 177 | WP_258169272.1 | hypothetical protein | - |
| HFS24_RS22665 (HFS24_22615) | 54940..55245 | - | 306 | WP_219827520.1 | hypothetical protein | - |
| HFS24_RS22670 (HFS24_22620) | 55451..55744 | + | 294 | WP_219827521.1 | hypothetical protein | - |
| HFS24_RS22675 (HFS24_22625) | 55944..56528 | + | 585 | WP_219827522.1 | hypothetical protein | - |
| HFS24_RS22680 (HFS24_22630) | 56608..56991 | - | 384 | WP_219827523.1 | hypothetical protein | - |
| HFS24_RS22685 (HFS24_22635) | 57004..57501 | - | 498 | WP_258169273.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| HFS24_RS22690 (HFS24_22640) | 57539..58078 | + | 540 | WP_258169274.1 | tail assembly protein | - |
| HFS24_RS22695 (HFS24_22645) | 58193..58780 | + | 588 | WP_219827524.1 | hypothetical protein | - |
| HFS24_RS22700 (HFS24_22650) | 59013..59294 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| HFS24_RS22705 (HFS24_22655) | 59275..59604 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HFS24_RS22710 (HFS24_22660) | 59832..60029 | - | 198 | Protein_64 | Tn3 family transposase ISEc63 | Transposase |
| HFS24_RS22715 (HFS24_22665) | 60303..60722 | + | 420 | WP_219827525.1 | Exc2 family lipoprotein | - |
| HFS24_RS22720 (HFS24_22670) | 60732..61469 | - | 738 | Protein_66 | IS110 family transposase IS1618 | Transposase |
| HFS24_RS22725 (HFS24_22675) | 61911..62192 | - | 282 | WP_219827526.1 | arylsulfatase regulator | - |
| HFS24_RS22730 (HFS24_22680) | 62319..62957 | + | 639 | WP_219827527.1 | Tyrosine recombinase XerD | VF |
| HFS24_RS22735 (HFS24_22685) | 63279..63755 | + | 477 | WP_219827528.1 | CaiF/GrlA family transcriptional regulator | - |
| HFS24_RS22740 (HFS24_22690) | 63755..64405 | + | 651 | WP_219827529.1 | hypothetical protein | VF |
| HFS24_RS22745 (HFS24_22695) | 64529..69229 | + | 4701 | WP_219827530.1 | Intimin | VF |
| HFS24_RS22750 (HFS24_22700) | 69446..69904 | + | 459 | WP_219827540.1 | hypothetical protein | VF |
| HFS24_RS22755 (HFS24_22705) | 70669..70851 | - | 183 | Protein_73 | VapC toxin family PIN domain ribonuclease | - |
| HFS24_RS22760 (HFS24_22710) | 70857..70994 | + | 138 | Protein_74 | IS3 family transposase | - |
| HFS24_RS22765 (HFS24_22715) | 71152..72549 | - | 1398 | WP_219827421.1 | ISNCY family transposase ISKpn21 | Transposase |
| HFS24_RS22770 (HFS24_22720) | 72733..73131 | - | 399 | WP_047665785.1 | ISNCY family transposase ISKpn21 | Transposase |
| HFS24_RS22775 (HFS24_22725) | 73180..74526 | - | 1347 | WP_077253906.1 | ISNCY family transposase ISLad2 | Transposase |
| HFS24_RS22780 (HFS24_22730) | 74773..74946 | - | 174 | Protein_78 | GNAT family N-acetyltransferase | - |
| HFS24_RS22785 (HFS24_22735) | 75222..75806 | - | 585 | WP_219827422.1 | hypothetical protein | - |
| HFS24_RS23635 | 75996..76091 | - | 96 | Protein_80 | hypothetical protein | - |
| HFS24_RS22790 (HFS24_22740) | 76264..76699 | - | 436 | Protein_81 | helix-turn-helix domain-containing protein | - |
| HFS24_RS23640 | 76696..76857 | - | 162 | Protein_82 | type II toxin-antitoxin system HigB family toxin | - |
| HFS24_RS22800 (HFS24_22750) | 76874..77965 | - | 1092 | WP_219827423.1 | linear amide C-N hydrolase | - |
| HFS24_RS22805 (HFS24_22755) | 78486..78812 | - | 327 | WP_219827424.1 | nucleoside transporter | - |
| HFS24_RS22810 (HFS24_22760) | 78841..79473 | - | 633 | WP_219827425.1 | hypothetical protein | - |
| HFS24_RS22815 (HFS24_22765) | 79470..80705 | - | 1236 | WP_219827426.1 | DUF3440 domain-containing protein | - |
| HFS24_RS22820 (HFS24_22770) | 80702..81421 | - | 720 | WP_219827427.1 | hypothetical protein | - |
| HFS24_RS22825 (HFS24_22775) | 81414..81917 | - | 504 | WP_258169264.1 | CaiF/GrlA family transcriptional regulator | - |
| HFS24_RS22830 (HFS24_22780) | 82464..83132 | - | 669 | WP_219827428.1 | hypothetical protein | - |
| HFS24_RS22835 (HFS24_22785) | 83144..84049 | - | 906 | WP_219827429.1 | fimbrial protein | - |
| HFS24_RS22840 (HFS24_22790) | 84062..86698 | - | 2637 | WP_219827430.1 | putative outer membrane usher protein ElfC | VF |
| HFS24_RS22845 (HFS24_22795) | 87000..87725 | - | 726 | WP_219827431.1 | Chaperone protein FocC | VF |
| HFS24_RS22850 (HFS24_22800) | 87785..88393 | - | 609 | WP_219827432.1 | hypothetical protein | - |
| HFS24_RS22855 (HFS24_22805) | 89099..89749 | + | 651 | WP_219827433.1 | PIG-L deacetylase family protein | - |
| HFS24_RS22860 (HFS24_22810) | 89750..90907 | + | 1158 | WP_219827434.1 | Poly-beta-1,6-N-acetyl-D-glucosamine synthase | VF |
| HFS24_RS22865 (HFS24_22815) | 90813..91502 | + | 690 | WP_219827435.1 | acetyltransferase | - |
| HFS24_RS22870 (HFS24_22820) | 91499..92275 | + | 777 | WP_219827436.1 | YaiO family outer membrane beta-barrel protein | - |
| HFS24_RS22875 (HFS24_22825) | 92826..93050 | + | 225 | WP_258169265.1 | DUF826 domain-containing protein | - |
| HFS24_RS22880 (HFS24_22830) | 93221..93814 | + | 594 | WP_219827437.1 | hypothetical protein | - |
| HFS24_RS22885 (HFS24_22835) | 94682..95263 | + | 582 | WP_219827438.1 | hypothetical protein | - |
| HFS24_RS22890 (HFS24_22840) | 95582..96184 | + | 603 | WP_219827439.1 | hypothetical protein | - |
| HFS24_RS22895 (HFS24_22845) | 96388..96581 | - | 194 | Protein_102 | IS110 family transposase | - |
| HFS24_RS23645 | 96697..96828 | - | 132 | Protein_103 | hypothetical protein | - |
| HFS24_RS22900 (HFS24_22850) | 97153..97743 | - | 591 | WP_219827440.1 | hypothetical protein | - |
| HFS24_RS23650 | 97866..98045 | - | 180 | WP_258169266.1 | hypothetical protein | - |
| HFS24_RS23655 | 98371..98640 | - | 270 | Protein_106 | IS3 family transposase | - |
| HFS24_RS22910 (HFS24_22860) | 99381..99764 | + | 384 | WP_219827441.1 | DUF1090 domain-containing protein | - |
| HFS24_RS22915 (HFS24_22865) | 99944..100270 | - | 327 | WP_219827442.1 | nucleoside transporter | - |
| HFS24_RS23660 | 100293..100493 | - | 201 | WP_258169267.1 | hypothetical protein | - |
| HFS24_RS22925 | 100741..100989 | - | 249 | WP_219827443.1 | hypothetical protein | - |
| HFS24_RS22930 | 101239..101520 | - | 282 | WP_219827444.1 | hypothetical protein | - |
| HFS24_RS22935 (HFS24_22880) | 101763..102257 | - | 495 | WP_219827445.1 | CaiF/GrlA family transcriptional regulator | - |
| HFS24_RS22940 (HFS24_22885) | 102655..102795 | - | 141 | WP_219827446.1 | hypothetical protein | - |
| HFS24_RS22945 (HFS24_22890) | 103964..105091 | - | 1128 | WP_219827447.1 | TQO small subunit DoxD | - |
| HFS24_RS22950 (HFS24_22895) | 105719..105982 | + | 264 | Protein_115 | type II toxin-antitoxin system ParD family antitoxin | - |
| HFS24_RS22955 (HFS24_22900) | 105969..106265 | + | 297 | WP_219827448.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HFS24_RS22960 (HFS24_22905) | 106490..106756 | + | 267 | WP_258169268.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| HFS24_RS22965 (HFS24_22910) | 106743..107039 | + | 297 | WP_219827449.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HFS24_RS22970 (HFS24_22915) | 107404..108144 | + | 741 | WP_219827450.1 | tyrosine-type recombinase/integrase | - |
| HFS24_RS22975 (HFS24_22920) | 108470..109462 | - | 993 | WP_219827536.1 | RepB family plasmid replication initiator protein | - |
| HFS24_RS22980 (HFS24_22925) | 110317..110586 | + | 270 | WP_001275014.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HFS24_RS22985 (HFS24_22930) | 110590..111120 | + | 531 | WP_219827451.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HFS24_RS22990 (HFS24_22935) | 111362..111970 | + | 609 | WP_219827452.1 | DUF2913 family protein | - |
| HFS24_RS22995 (HFS24_22940) | 111967..112335 | - | 369 | WP_219827453.1 | hypothetical protein | VF |
| HFS24_RS23000 (HFS24_22945) | 112653..112904 | + | 252 | WP_023213107.1 | plasmid stabilization protein | - |
| HFS24_RS23005 (HFS24_22950) | 112901..113218 | + | 318 | WP_096198112.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HFS24_RS23010 (HFS24_22955) | 113741..114607 | + | 867 | WP_080155185.1 | AAA family ATPase | - |
| HFS24_RS23015 (HFS24_22960) | 114607..115638 | + | 1032 | WP_219827454.1 | ParB/RepB/Spo0J family partition protein | - |
| HFS24_RS23020 (HFS24_22965) | 115638..116075 | + | 438 | WP_080155187.1 | hypothetical protein | - |
| HFS24_RS23025 | 116072..116395 | + | 324 | WP_219827455.1 | hypothetical protein | - |
| HFS24_RS23030 (HFS24_22975) | 116494..117768 | - | 1275 | WP_219827456.1 | Y-family DNA polymerase | - |
| HFS24_RS23035 (HFS24_22980) | 117768..118190 | - | 423 | WP_015405807.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HFS24_RS23040 (HFS24_22985) | 118368..119039 | - | 672 | WP_080155072.1 | SOS response-associated peptidase family protein | - |
| HFS24_RS23045 (HFS24_22990) | 119399..120076 | + | 678 | WP_201483778.1 | DNA methylase | - |
| HFS24_RS23050 (HFS24_22995) | 120076..120297 | + | 222 | WP_023972437.1 | hypothetical protein | - |
| HFS24_RS23055 (HFS24_23000) | 120308..120727 | + | 420 | WP_000274509.1 | DUF1380 family protein | - |
| HFS24_RS23060 (HFS24_23005) | 120781..121560 | + | 780 | WP_219827457.1 | hypothetical protein | - |
| HFS24_RS23065 (HFS24_23010) | 121967..122473 | + | 507 | WP_219827458.1 | antirestriction protein ArdA | - |
| HFS24_RS23070 (HFS24_23015) | 122516..122707 | + | 192 | WP_000761848.1 | hypothetical protein | - |
| HFS24_RS23075 (HFS24_23020) | 122710..122880 | + | 171 | WP_219827459.1 | hypothetical protein | - |
| HFS24_RS23080 (HFS24_23025) | 122899..123153 | + | 255 | WP_219827460.1 | DNA polymerase III subunit theta | - |
| HFS24_RS23085 (HFS24_23030) | 123188..123505 | + | 318 | WP_219827461.1 | hypothetical protein | - |
| HFS24_RS23665 | 123711..123855 | - | 145 | Protein_143 | hypothetical protein | - |
| HFS24_RS23090 (HFS24_23040) | 124137..124694 | + | 558 | WP_219827462.1 | single-stranded DNA-binding protein | - |
| HFS24_RS23095 (HFS24_23045) | 124746..124985 | + | 240 | WP_219827463.1 | DUF905 domain-containing protein | - |
| HFS24_RS23100 (HFS24_23050) | 125056..127110 | + | 2055 | WP_219827464.1 | ParB/RepB/Spo0J family partition protein | - |
| HFS24_RS23105 (HFS24_23055) | 127151..127585 | + | 435 | WP_219827537.1 | conjugation system SOS inhibitor PsiB | - |
| HFS24_RS23110 (HFS24_23060) | 127582..128310 | + | 729 | WP_219827465.1 | plasmid SOS inhibition protein A | - |
| HFS24_RS23115 (HFS24_23065) | 128307..128633 | + | 327 | WP_219827538.1 | theronine dehydrogenase | - |
| HFS24_RS23120 (HFS24_23070) | 128836..128997 | + | 162 | WP_219827466.1 | type I toxin-antitoxin system Hok family toxin | - |
| HFS24_RS23125 (HFS24_23075) | 129788..130192 | + | 405 | WP_219827467.1 | ammonia monooxygenase | - |
| HFS24_RS23130 (HFS24_23080) | 130249..130593 | + | 345 | WP_219827468.1 | hypothetical protein | - |
| HFS24_RS23135 (HFS24_23085) | 130679..130945 | + | 267 | WP_219827469.1 | hypothetical protein | - |
| HFS24_RS23140 (HFS24_23090) | 130992..131825 | + | 834 | WP_219827470.1 | N-6 DNA methylase | - |
| HFS24_RS23145 (HFS24_23095) | 132393..132979 | + | 587 | Protein_155 | antirestriction protein | - |
| HFS24_RS23150 (HFS24_23100) | 132990..133445 | - | 456 | WP_219827472.1 | hypothetical protein | VF |
| HFS24_RS23155 (HFS24_23105) | 133914..134297 | + | 384 | WP_219827473.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HFS24_RS23160 (HFS24_23110) | 134593..135042 | + | 450 | WP_219827474.1 | helix-turn-helix transcriptional regulator | - |
| HFS24_RS23165 (HFS24_23115) | 135249..135482 | + | 234 | WP_219827475.1 | TraY domain-containing protein | - |
| HFS24_RS23170 (HFS24_23120) | 135599..135958 | + | 360 | WP_219827476.1 | type IV conjugative transfer system pilin TraA | - |
| HFS24_RS23175 (HFS24_23125) | 135961..136266 | + | 306 | WP_219827539.1 | type IV conjugative transfer system protein TraL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|