MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 49582 bp
Accession: NZ_CP051367 Location: 1..49582 Organism: Salmonella enterica subsp. enterica serovar Choleraesuis strain CVM 28296 Replicon: plasmid p28296-1
Accession: NZ_CP051367 Location: 1..49582 Organism: Salmonella enterica subsp. enterica serovar Choleraesuis strain CVM 28296 Replicon: plasmid p28296-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFS36_RS23135 () | 905..1207 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| HFS36_RS23140 () | 1482..2000 | + | 519 | WP_000748207.1 | major pilin PefA | - |
| HFS36_RS23145 () | 2227..4635 | + | 2409 | WP_199275046.1 | PefC/AfrB family outer membrane usher protein | - |
| HFS36_RS23150 () | 4628..5320 | + | 693 | WP_001038509.1 | fimbrial chaperone PefD | - |
| HFS36_RS23155 () | 5338..5514 | + | 177 | WP_162299956.1 | hypothetical protein | - |
| HFS36_RS23160 () | 5978..6859 | - | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| HFS36_RS23165 () | 6840..6917 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| HFS36_RS23170 () | 7167..7433 | - | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| HFS36_RS23175 () | 7764..7919 | - | 156 | WP_001719547.1 | hypothetical protein | - |
| HFS36_RS23180 () | 7935..8208 | - | 274 | Protein_10 | disulfide bond formation protein DsbA | - |
| HFS36_RS23185 () | 8325..8888 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| HFS36_RS23190 () | 8943..9683 | - | 741 | WP_000177630.1 | conjugal transfer pilus acetylase TraX | - |
| HFS36_RS23195 () | 9703..12204 | - | 2502 | Protein_13 | conjugative relaxase | - |
| HFS36_RS23200 () | 12286..12513 | + | 228 | WP_000450263.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HFS36_RS23205 () | 12513..12911 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| HFS36_RS23210 () | 12920..15136 | - | 2217 | WP_199275047.1 | type IV conjugative transfer system coupling protein TraD | - |
| HFS36_RS23215 () | 15508..16239 | - | 732 | WP_001541558.1 | complement resistance protein TraT | - |
| HFS36_RS23220 () | 16542..16784 | - | 243 | WP_024131413.1 | hypothetical protein | - |
| HFS36_RS23225 () | 16781..17482 | - | 702 | WP_148201696.1 | hypothetical protein | - |
| HFS36_RS23230 () | 17784..18206 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HFS36_RS23235 () | 18206..19480 | + | 1275 | WP_001541560.1 | Y-family DNA polymerase | - |
| HFS36_RS23240 () | 19562..20536 | - | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| HFS36_RS23245 () | 20536..21741 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| HFS36_RS23250 () | 22156..23097 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HFS36_RS23255 () | 23129..23695 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| HFS36_RS23260 () | 23752..24087 | - | 336 | WP_001541563.1 | hypothetical protein | - |
| HFS36_RS23265 () | 24271..24687 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| HFS36_RS23270 () | 24773..25888 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| HFS36_RS23275 () | 26333..26635 | + | 303 | WP_014411932.1 | hypothetical protein | - |
| HFS36_RS23280 () | 27290..28030 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| HFS36_RS23285 () | 28237..28797 | + | 561 | WP_010904491.1 | recombinase family protein | - |
| HFS36_RS23290 () | 28781..30445 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| HFS36_RS23295 () | 30378..31403 | + | 1026 | Protein_33 | ExeA family protein | - |
| HFS36_RS23300 () | 31592..32629 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| HFS36_RS23305 () | 33238..34131 | + | 894 | WP_001541536.1 | virulence genes transcriptional activator SpvR | - |
| HFS36_RS23310 () | 34305..34469 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| HFS36_RS23315 () | 34643..35410 | + | 768 | WP_001541537.1 | virulence protein SpvA | - |
| HFS36_RS23320 () | 35373..35540 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| HFS36_RS23325 () | 35592..37367 | + | 1776 | WP_001541538.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| HFS36_RS23330 () | 37648..38373 | + | 726 | WP_010904474.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| HFS36_RS23335 () | 38634..39284 | + | 651 | WP_001541540.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| HFS36_RS23340 () | 39411..39836 | - | 426 | WP_000064919.1 | IS200/IS605 family transposase | - |
| HFS36_RS23345 () | 39893..40243 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| HFS36_RS23350 () | 40310..40869 | - | 560 | Protein_44 | inverse autotransporter beta domain-containing protein | - |
| HFS36_RS23355 () | 41589..42074 | - | 486 | WP_000905606.1 | membrane protein | - |
| HFS36_RS23360 () | 42068..42577 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| HFS36_RS23365 () | 42504..43272 | - | 769 | Protein_47 | EAL domain-containing protein | - |
| HFS36_RS23370 () | 43281..44063 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| HFS36_RS23375 () | 44098..44619 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| HFS36_RS23380 () | 44616..44906 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| HFS36_RS23385 () | 44908..45213 | - | 306 | WP_001541545.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HFS36_RS23390 () | 45215..45433 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HFS36_RS23395 () | 46109..46630 | + | 522 | WP_011264020.1 | hypothetical protein | - |
| HFS36_RS23400 () | 46674..47102 | - | 429 | Protein_54 | hypothetical protein | - |
| HFS36_RS23405 () | 47114..47409 | + | 296 | Protein_55 | cytoplasmic protein | - |
| HFS36_RS23410 () | 47903..48892 | + | 990 | WP_000461383.1 | RepB family plasmid replication initiator protein | - |
| HFS36_RS23415 () | 49181..49342 | - | 162 | WP_001541548.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|