MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 102373 bp
Accession: NZ_CP051314 Location: 1..102373 Organism: Salmonella enterica subsp. enterica serovar London strain CVM 35153 Replicon: plasmid p35153
Accession: NZ_CP051314 Location: 1..102373 Organism: Salmonella enterica subsp. enterica serovar London strain CVM 35153 Replicon: plasmid p35153
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFU13_RS22515 () | 1..2169 | + | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| HFU13_RS22520 () | 2240..2902 | + | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HFU13_RS22525 () | 2974..3141 | - | 168 | WP_001396781.1 | HEAT repeat domain-containing protein | - |
| HFU13_RS22530 () | 3267..3455 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| HFU13_RS22535 () | 3465..4664 | + | 1200 | WP_000948429.1 | IS91 family transposase | - |
| HFU13_RS22540 () | 5263..5439 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| HFU13_RS22545 () | 6160..7182 | + | 1023 | WP_001572805.1 | IS21-like element IS100 family transposase | - |
| HFU13_RS22550 () | 7179..7961 | + | 783 | WP_001300609.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| HFU13_RS22555 () | 8322..8573 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| HFU13_RS22560 () | 8645..8797 | - | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| HFU13_RS22565 () | 9089..10297 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| HFU13_RS22570 () | 10316..11386 | + | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| HFU13_RS22575 () | 11379..13670 | + | 2292 | WP_001289271.1 | hypothetical protein | - |
| HFU13_RS22580 () | 13707..16406 | - | 2700 | WP_001474686.1 | IncI1-type relaxase NikB | - |
| HFU13_RS22585 () | 16417..16749 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| HFU13_RS22590 () | 16983..17318 | + | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HFU13_RS22595 () | 17404..18252 | - | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| HFU13_RS22600 () | 18833..19084 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| HFU13_RS22605 () | 19115..19396 | - | 282 | WP_001334682.1 | hypothetical protein | - |
| HFU13_RS22610 () | 19396..20298 | - | 903 | WP_000038404.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HFU13_RS22615 () | 20363..20629 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| HFU13_RS22620 () | 20723..21157 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| HFU13_RS22625 () | 21886..22386 | - | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| HFU13_RS22630 () | 22833..24008 | - | 1176 | WP_000942657.1 | transposase | - |
| HFU13_RS22635 () | 24138..24857 | - | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| HFU13_RS22640 () | 24854..25288 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| HFU13_RS22645 () | 25343..27301 | - | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| HFU13_RS22650 () | 27360..27593 | - | 234 | WP_000006012.1 | DUF905 family protein | - |
| HFU13_RS22655 () | 27651..28178 | - | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| HFU13_RS22660 () | 28547..28615 | + | 69 | Protein_29 | pilus protein | - |
| HFU13_RS22665 () | 28948..29139 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| HFU13_RS22670 () | 29136..29558 | - | 423 | WP_000271725.1 | DUF1380 family protein | - |
| HFU13_RS22675 () | 29605..30030 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| HFU13_RS22680 () | 30448..31218 | - | 771 | WP_024133193.1 | hypothetical protein | - |
| HFU13_RS22685 () | 31269..31703 | - | 435 | WP_000274403.1 | DUF1380 family protein | - |
| HFU13_RS22690 () | 31715..31936 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| HFU13_RS22695 () | 31937..32620 | - | 684 | WP_000086178.1 | DNA methylase | - |
| HFU13_RS22700 () | 32697..33008 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| HFU13_RS22705 () | 33005..33907 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| HFU13_RS22710 () | 34325..34573 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| HFU13_RS22715 () | 34570..35007 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| HFU13_RS22720 () | 35007..36281 | + | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| HFU13_RS22725 () | 36283..36699 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| HFU13_RS22730 () | 36692..37672 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| HFU13_RS22735 () | 38086..38394 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| HFU13_RS22740 () | 38481..39125 | - | 645 | WP_001144036.1 | ParA family protein | - |
| HFU13_RS22745 () | 39305..40111 | - | 807 | WP_000016969.1 | site-specific integrase | - |
| HFU13_RS22750 () | 40112..40417 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HFU13_RS22755 () | 40419..40637 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HFU13_RS22760 () | 41195..42121 | + | 927 | WP_001290416.1 | hypothetical protein | - |
| HFU13_RS22765 () | 42166..42420 | + | 255 | WP_000678527.1 | hypothetical protein | - |
| HFU13_RS22770 () | 42919..43263 | + | 345 | WP_000793307.1 | hypothetical protein | - |
| HFU13_RS22775 () | 43439..44440 | - | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| HFU13_RS22780 () | 44792..45046 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| HFU13_RS22785 () | 45046..45636 | + | 591 | WP_000194550.1 | hypothetical protein | - |
| HFU13_RS22790 () | 45654..46001 | - | 348 | WP_000142436.1 | hypothetical protein | - |
| HFU13_RS22795 () | 46120..46467 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| HFU13_RS22800 () | 46485..48365 | - | 1881 | WP_001283341.1 | colicin 1B | - |
| HFU13_RS22805 () | 48644..49114 | - | 471 | Protein_58 | hypothetical protein | - |
| HFU13_RS22810 () | 49166..49483 | + | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HFU13_RS22815 () | 49480..50013 | - | 534 | WP_001221666.1 | lipocalin family protein | - |
| HFU13_RS22820 () | 50107..51252 | - | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| HFU13_RS22825 () | 51576..51743 | - | 168 | Protein_62 | transposase | - |
| HFU13_RS22830 () | 51860..52048 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| HFU13_RS22835 () | 52058..53257 | + | 1200 | WP_000948429.1 | IS91 family transposase | - |
| HFU13_RS22840 () | 53429..54526 | - | 1098 | Protein_65 | IS1380-like element ISEc9 family transposase | - |
| HFU13_RS22845 () | 54708..55592 | - | 885 | Protein_66 | hypothetical protein | - |
| HFU13_RS22850 () | 55946..56548 | + | 603 | WP_000517695.1 | hypothetical protein | - |
| HFU13_RS22855 () | 56604..57098 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| HFU13_RS22860 () | 57098..57364 | + | 267 | WP_000955263.1 | hypothetical protein | - |
| HFU13_RS22865 () | 57841..58314 | - | 474 | WP_001334658.1 | hypothetical protein | - |
| HFU13_RS22870 () | 58431..59279 | - | 849 | WP_001057992.1 | 3'-5' exonuclease | - |
| HFU13_RS22875 () | 59319..59600 | - | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HFU13_RS22880 () | 59597..59866 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HFU13_RS22885 () | 60775..61806 | - | 1032 | WP_000907873.1 | replication initiation protein | - |
| HFU13_RS22890 () | 62779..63042 | + | 264 | WP_001324596.1 | ash family protein | - |
| HFU13_RS22895 () | 62960..63247 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HFU13_RS22900 () | 63689..64222 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| HFU13_RS22905 () | 64476..65159 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| HFU13_RS22910 () | 65173..65739 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| HFU13_RS22915 () | 66007..66261 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| HFU13_RS22920 () | 66304..66756 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| HFU13_RS22925 () | 67430..68497 | + | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| HFU13_RS22930 () | 68497..68934 | + | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| HFU13_RS22935 () | 68948..70630 | + | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| HFU13_RS22940 () | 70623..71918 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| HFU13_RS22945 () | 71905..72357 | + | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| HFU13_RS22950 () | 72368..73921 | + | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| HFU13_RS22955 () | 73934..75031 | + | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| HFU13_RS22960 () | 75049..75663 | + | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| HFU13_RS22965 () | 75673..76233 | + | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| HFU13_RS22970 () | 76218..76874 | + | 657 | WP_001193553.1 | prepilin peptidase | - |
| HFU13_RS22975 () | 76874..78166 | + | 1293 | WP_032274560.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HFU13_RS22980 () | 78163..78411 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| HFU13_RS22985 () | 79102..80256 | + | 1155 | WP_001139958.1 | integrase | - |
| HFU13_RS22990 () | 80407..81230 | + | 824 | Protein_95 | conjugal transfer protein TraE | - |
| HFU13_RS22995 () | 81316..82518 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| HFU13_RS23000 () | 82578..83162 | + | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| HFU13_RS23005 () | 83557..84015 | + | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HFU13_RS23010 () | 84012..84830 | + | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| HFU13_RS23015 () | 84827..85975 | + | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| HFU13_RS23020 () | 85972..86262 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| HFU13_RS23025 () | 86277..86828 | + | 552 | WP_000014584.1 | phospholipase D family protein | - |
| HFU13_RS23030 () | 86918..90685 | + | 3768 | WP_001141535.1 | hypothetical protein | - |
| HFU13_RS23035 () | 90703..91050 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HFU13_RS23040 () | 91047..91739 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| HFU13_RS23045 () | 91750..92733 | + | 984 | WP_001191878.1 | IncI1-type conjugal transfer protein TraN | - |
| HFU13_RS23050 () | 92736..94025 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| HFU13_RS23055 () | 94025..94729 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HFU13_RS23060 () | 94729..95256 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HFU13_RS23065 () | 95307..95711 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| HFU13_RS23070 () | 95775..95963 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HFU13_RS23075 () | 95947..96747 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HFU13_RS23080 () | 96837..99881 | + | 3045 | WP_001024751.1 | IncI1-type conjugal transfer protein TraU | - |
| HFU13_RS23085 () | 99881..100495 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| HFU13_RS23090 () | 100462..101664 | + | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| HFU13_RS23095 () | 101693..102277 | + | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|