MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60732 bp
Accession: NZ_CP051226 Location: 1..60732 Organism: Escherichia coli strain SCZE5 Replicon: plasmid pSCZE4
Accession: NZ_CP051226 Location: 1..60732 Organism: Escherichia coli strain SCZE5 Replicon: plasmid pSCZE4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HF562_RS24475 () | 1..1029 | + | 1029 | WP_001175213.1 | replication initiation protein | - |
| HF562_RS24480 () | 2083..2244 | + | 162 | WP_001128311.1 | hypothetical protein | - |
| HF562_RS24485 () | 2628..2789 | + | 162 | WP_000775236.1 | type I toxin-antitoxin system Hok family toxin | - |
| HF562_RS24490 () | 2939..3535 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| HF562_RS24980 () | 3553..3837 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| HF562_RS24500 () | 3911..4576 | - | 666 | WP_000532148.1 | P-loop NTPase | - |
| HF562_RS24505 () | 5174..5503 | + | 330 | WP_000855120.1 | hypothetical protein | - |
| HF562_RS24510 () | 5612..5758 | - | 147 | WP_001356709.1 | hypothetical protein | - |
| HF562_RS24515 () | 6085..6408 | + | 324 | WP_000427403.1 | hypothetical protein | - |
| HF562_RS24520 () | 6450..6659 | + | 210 | WP_000866036.1 | hypothetical protein | - |
| HF562_RS24525 () | 6756..6980 | + | 225 | WP_000814381.1 | hypothetical protein | - |
| HF562_RS24530 () | 7032..7292 | + | 261 | WP_000702247.1 | hypothetical protein | Toxin Detail |
| HF562_RS24535 () | 7282..7533 | + | 252 | WP_001132407.1 | transcriptional regulator | Antitoxin Detail |
| HF562_RS24540 () | 8083..8361 | + | 279 | WP_000545938.1 | hypothetical protein | - |
| HF562_RS24545 () | 8781..9047 | + | 267 | WP_000681608.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| HF562_RS24550 () | 9154..9336 | - | 183 | WP_001481829.1 | hypothetical protein | - |
| HF562_RS24555 () | 9894..10076 | + | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| HF562_RS24560 () | 10101..10538 | + | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| HF562_RS24565 () | 10669..10995 | - | 327 | WP_063078684.1 | hypothetical protein | - |
| HF562_RS24570 () | 11015..11722 | - | 708 | WP_021503228.1 | hypothetical protein | - |
| HF562_RS24575 () | 11724..12476 | - | 753 | WP_063078685.1 | conjugal transfer protein TraL | - |
| HF562_RS24580 () | 12494..12895 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| HF562_RS24585 () | 13263..13604 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| HF562_RS24590 () | 13601..17914 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| HF562_RS24595 () | 18135..19760 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| HF562_RS24600 () | 19832..20605 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| HF562_RS24605 () | 20564..21004 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| HF562_RS24610 () | 21350..21556 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| HF562_RS24615 () | 21625..23790 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| HF562_RS24620 () | 23795..24370 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| HF562_RS24625 () | 24540..26216 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| HF562_RS24630 () | 26311..26826 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| HF562_RS24635 () | 26873..27526 | - | 654 | WP_170852113.1 | hypothetical protein | - |
| HF562_RS24640 () | 27538..28662 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| HF562_RS24985 () | 29576..29785 | - | 210 | WP_001444223.1 | hypothetical protein | - |
| HF562_RS24645 () | 30111..31397 | - | 1287 | WP_015057162.1 | hypothetical protein | VF |
| HF562_RS24650 () | 31410..32045 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| HF562_RS24655 () | 32049..32531 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| HF562_RS24660 () | 32597..33154 | - | 558 | WP_000095048.1 | hypothetical protein | - |
| HF562_RS24665 () | 33199..34308 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| HF562_RS24670 () | 34299..35837 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| HF562_RS24675 () | 35862..36356 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| HF562_RS24680 () | 36340..37662 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| HF562_RS24685 () | 37701..39344 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| HF562_RS24690 () | 39337..39873 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| HF562_RS24695 () | 39920..41878 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HF562_RS24700 () | 41894..42949 | - | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| HF562_RS24705 () | 42968..44107 | - | 1140 | WP_000790640.1 | Type IV secretion system protein virB10 | VF |
| HF562_RS24710 () | 44097..44798 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| HF562_RS24715 () | 44864..45598 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| HF562_RS24720 () | 45598..45732 | - | 135 | WP_000701233.1 | hypothetical protein | - |
| HF562_RS24725 () | 45764..48121 | - | 2358 | WP_063078682.1 | VirB4 family type IV secretion system protein | - |
| HF562_RS24730 () | 48127..48447 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| HF562_RS24735 () | 48518..48706 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| HF562_RS24740 () | 48808..49392 | - | 585 | WP_001177113.1 | Type IV secretion system protein virB1 | VF |
| HF562_RS24745 () | 49413..49811 | - | 399 | WP_001153665.1 | hypothetical protein | - |
| HF562_RS24750 () | 49930..50367 | - | 438 | WP_000539665.1 | type IV pilus biogenesis protein PilM | - |
| HF562_RS24755 () | 50373..51608 | - | 1236 | WP_015059538.1 | hypothetical protein | VF |
| HF562_RS24760 () | 51611..51910 | - | 300 | WP_000835764.1 | IncN plasmid KikA protein | - |
| HF562_RS24765 () | 51978..52259 | - | 282 | WP_000638823.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HF562_RS24770 () | 52249..52500 | - | 252 | WP_000121741.1 | hypothetical protein | Antitoxin Detail |
| HF562_RS24775 () | 52600..53235 | - | 636 | WP_015059536.1 | hypothetical protein | - |
| HF562_RS24780 () | 53308..53595 | - | 288 | WP_001032611.1 | EexN family lipoprotein | - |
| HF562_RS24785 () | 53608..53862 | - | 255 | WP_001043555.1 | EexN family lipoprotein | - |
| HF562_RS24790 () | 53864..54505 | - | 642 | WP_001425343.1 | hypothetical protein | VF |
| HF562_RS24795 () | 54511..55506 | - | 996 | WP_001028543.1 | type IV secretion system protein | - |
| HF562_RS24800 () | 55510..55767 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| HF562_RS24805 () | 55764..56066 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| HF562_RS24810 () | 56047..56304 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| HF562_RS24815 () | 56337..56783 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| HF562_RS24820 () | 56794..56964 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| HF562_RS24825 () | 56968..57411 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| HF562_RS24830 () | 57785..58738 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| HF562_RS24835 () | 58765..58941 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| HF562_RS24840 () | 58934..59149 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| HF562_RS24845 () | 59142..59648 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|