MGE detailed information
MGE type: Genomic_island MGE length: 45179 bp
Accession: NZ_CP051213 Location: 4195643..4240821 Organism: Salmonella enterica strain SCSW714 Replicon: chromosome
Accession: NZ_CP051213 Location: 4195643..4240821 Organism: Salmonella enterica strain SCSW714 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
HGB43_RS20310 (4190982) | 4190982..4191995 | + | 1014 | WP_023138508.1 | tryptophan--tRNA ligase | - |
HGB43_RS20315 (4191996) | 4191996..4192769 | - | 774 | WP_000841654.1 | Uxu operon transcriptional regulator | - |
HGB43_RS20320 (4193119) | 4193119..4193793 | + | 675 | WP_023138507.1 | dienelactone hydrolase family protein | - |
HGB43_RS20325 (4193790) | 4193790..4194251 | - | 462 | WP_001654330.1 | DUF302 domain-containing protein | - |
HGB43_RS20330 (4194456) | 4194456..4195367 | - | 912 | WP_023138506.1 | hypothetical protein | - |
HGB43_RS20335 (4195643) | 4195643..4196638 | - | 996 | WP_023138505.1 | hypothetical protein | - |
HGB43_RS20340 (4196890) | 4196890..4197498 | - | 609 | WP_000864866.1 | DUF1062 domain-containing protein | - |
HGB43_RS20345 (4197986) | 4197986..4198243 | + | 258 | WP_001054380.1 | YjhX family toxin | - |
HGB43_RS20350 (4198248) | 4198248..4199879 | + | 1632 | WP_077908622.1 | class I SAM-dependent methyltransferase | - |
HGB43_RS20355 (4200439) | 4200439..4201155 | + | 717 | WP_000532937.1 | transcriptional regulatory protein YeeN | VF |
HGB43_RS20360 (4201634) | 4201634..4202509 | - | 876 | WP_023138503.1 | HNH endonuclease | - |
HGB43_RS20365 (4202587) | 4202587..4202781 | - | 195 | WP_023138502.1 | hypothetical protein | - |
HGB43_RS20370 (4203093) | 4203093..4206392 | + | 3300 | WP_023138501.1 | STY4851/ECs_5259 family protein | - |
HGB43_RS20375 (4206405) | 4206405..4212725 | + | 6321 | WP_220222597.1 | DEAD/DEAH box helicase | - |
HGB43_RS20380 (4212883) | 4212883..4212999 | + | 117 | Protein_4015 | IS3 family transposase ISYpe1 | Transposase |
HGB43_RS20385 (4213225) | 4213225..4214242 | - | 1018 | Protein_4016 | IS110 family transposase ISSaen1 | Transposase |
HGB43_RS20390 (4214309) | 4214309..4215291 | + | 983 | Protein_4017 | IS3 family transposase | - |
HGB43_RS20395 (4215415) | 4215415..4215723 | - | 309 | WP_001199743.1 | CcdB family protein | Toxin Detail |
HGB43_RS20400 (4215726) | 4215726..4215965 | - | 240 | WP_001118105.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
HGB43_RS20405 (4216074) | 4216074..4216322 | - | 249 | WP_000168385.1 | ribbon-helix-helix domain-containing protein | - |
HGB43_RS20410 (4216399) | 4216399..4217232 | - | 834 | WP_023138496.1 | DUF4942 domain-containing protein | - |
HGB43_RS20415 (4217348) | 4217348..4217689 | - | 342 | WP_112324576.1 | TA system toxin CbtA family protein | Toxin Detail |
HGB43_RS20420 (4217733) | 4217733..4218074 | - | 342 | WP_023138494.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
HGB43_RS20425 (4218097) | 4218097..4218318 | - | 222 | WP_023138493.1 | DUF987 family protein | - |
HGB43_RS20430 (4218315) | 4218315..4218815 | - | 501 | WP_023138492.1 | DNA repair protein RadC | - |
HGB43_RS20435 (4218828) | 4218828..4219649 | - | 822 | WP_023138491.1 | DUF932 domain-containing protein | - |
HGB43_RS20440 (4219734) | 4219734..4220648 | - | 915 | WP_023138490.1 | hypothetical protein | - |
HGB43_RS20445 (4220713) | 4220713..4220916 | - | 204 | WP_023137300.1 | hypothetical protein | - |
HGB43_RS20450 (4220933) | 4220933..4221079 | - | 147 | WP_023892166.1 | hypothetical protein | - |
HGB43_RS20455 (4221152) | 4221152..4221865 | - | 714 | WP_023138489.1 | WYL domain-containing protein | - |
HGB43_RS20460 (4222220) | 4222220..4222513 | - | 294 | WP_023138487.1 | hypothetical protein | - |
HGB43_RS20465 (4222629) | 4222629..4223597 | - | 969 | WP_023138486.1 | hypothetical protein | - |
HGB43_RS20470 (4224099) | 4224099..4224734 | + | 636 | WP_033903615.1 | inovirus Gp2 family protein | - |
HGB43_RS20475 (4224839) | 4224839..4225045 | + | 207 | WP_023138484.1 | AlpA family phage regulatory protein | - |
HGB43_RS20480 (4225131) | 4225131..4225706 | + | 576 | WP_023138483.1 | hypothetical protein | - |
HGB43_RS20485 (4225863) | 4225863..4226387 | + | 525 | WP_023138482.1 | hypothetical protein | - |
HGB43_RS20490 (4226492) | 4226492..4226836 | - | 345 | WP_023138481.1 | hypothetical protein | - |
HGB43_RS20495 (4226896) | 4226896..4228125 | - | 1230 | WP_077908620.1 | HNH endonuclease signature motif containing protein | - |
HGB43_RS20500 (4228505) | 4228505..4230217 | + | 1713 | WP_023138479.1 | class I SAM-dependent DNA methyltransferase | - |
HGB43_RS20505 (4230204) | 4230204..4231517 | + | 1314 | WP_023138478.1 | restriction endonuclease subunit S | - |
HGB43_RS20510 (4231517) | 4231517..4234648 | + | 3132 | WP_023138477.1 | type I restriction endonuclease subunit R | - |
HGB43_RS20515 (4234708) | 4234708..4235205 | + | 498 | WP_071591275.1 | hypothetical protein | - |
HGB43_RS24025 (4235220) | 4235220..4236020 | + | 801 | WP_023138476.1 | hypothetical protein | - |
HGB43_RS24030 (4236159) | 4236159..4236341 | - | 183 | Protein_4044 | integrase | - |
HGB43_RS20525 (4236379) | 4236379..4237254 | - | 876 | WP_023138475.1 | HNH endonuclease | - |
HGB43_RS20530 (4237470) | 4237470..4238738 | - | 1269 | WP_023138474.1 | hypothetical protein ; Integrase | Integrase |
HGB43_RS20540 (4239245) | 4239245..4240264 | + | 1020 | WP_023138473.1 | NAD(P)-dependent alcohol dehydrogenase | - |
HGB43_RS20545 (4240292) | 4240292..4240821 | - | 530 | Protein_4048 | gluconokinase | - |
HGB43_RS20550 (4241038) | 4241038..4242069 | + | 1032 | WP_023138472.1 | L-idonate 5-dehydrogenase | - |
HGB43_RS20555 (4242094) | 4242094..4242858 | + | 765 | WP_000998688.1 | gluconate 5-dehydrogenase | - |
HGB43_RS20560 (4242920) | 4242920..4244239 | + | 1320 | WP_023138471.1 | gnt-II system L-idonate transporter | - |
HGB43_RS20565 (4244303) | 4244303..4245301 | + | 999 | WP_001244065.1 | LacI family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
---|