MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP051158 Location: 1025880..1035231 Organism: Escherichia coli strain 17MR471 Replicon: chromosome
Accession: NZ_CP051158 Location: 1025880..1035231 Organism: Escherichia coli strain 17MR471 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HF575_RS04845 () | 1021041..1022342 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| HF575_RS04850 () | 1022458..1022796 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| HF575_RS04855 () | 1022772..1024469 | + | 1698 | WP_000068928.1 | protein-disulfide reductase DsbD | - |
| HF575_RS04860 () | 1024506..1025081 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| HF575_RS04870 () | 1025880..1027418 | + | 1539 | WP_096264700.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HF575_RS04875 () | 1027784..1029118 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HF575_RS04880 () | 1029198..1031345 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HF575_RS04885 () | 1031404..1032861 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| HF575_RS04890 () | 1033098..1034615 | + | 1518 | WP_001295090.1 | lysine--tRNA ligase | - |
| HF575_RS04895 () | 1034734..1034907 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HF575_RS04900 () | 1034935..1035231 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HF575_RS04905 () | 1035458..1035730 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| HF575_RS04910 () | 1035742..1035972 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| HF575_RS04915 () | 1036153..1037784 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| HF575_RS04920 () | 1037781..1038500 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.003 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.003 |