MGE detailed information
MGE type: Genomic_island MGE length: 30519 bp
Accession: NZ_CP051001 Location: 1830146..1860664 Organism: Escherichia coli O157:H16 str. 98-3133 Replicon: chromosome
Accession: NZ_CP051001 Location: 1830146..1860664 Organism: Escherichia coli O157:H16 str. 98-3133 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BY40_RS08860 (1825297) | 1825297..1826211 | - | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| BY40_RS08865 (1826452) | 1826452..1827252 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| BY40_RS08870 (1827283) | 1827283..1827879 | + | 597 | Protein_1731 | methyltransferase domain-containing protein | - |
| BY40_RS08875 (1827927) | 1827927..1829285 | - | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| BY40_RS08880 (1829357) | 1829357..1830112 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| BY40_RS08885 (1830146) | 1830146..1830868 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| BY40_RS08890 (1830865) | 1830865..1831332 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| BY40_RS08895 (1831397) | 1831397..1832128 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| BY40_RS08905 (1832665) | 1832665..1833450 | + | 786 | WP_001086141.1 | lipoprotein | - |
| BY40_RS08910 (1833587) | 1833587..1834066 | - | 480 | WP_001236645.1 | protein YkfM | - |
| BY40_RS08915 (1834076) | 1834076..1834990 | - | 915 | WP_000908066.1 | hypothetical protein | - |
| BY40_RS08920 (1835034) | 1835034..1835516 | - | 483 | WP_001284199.1 | hypothetical protein | VF |
| BY40_RS08925 (1835443) | 1835443..1836892 | - | 1450 | Protein_1741 | hypothetical protein | VF |
| BY40_RS08930 (1836903) | 1836903..1838204 | - | 1302 | Protein_1742 | hypothetical protein | VF |
| BY40_RS08935 (1838219) | 1838219..1842307 | + | 4089 | Protein_1743 | hypothetical protein | VF |
| BY40_RS08940 (1842285) | 1842285..1842506 | + | 222 | WP_001101840.1 | hypothetical protein | - |
| BY40_RS08945 (1842503) | 1842503..1842679 | + | 177 | WP_000008098.1 | hypothetical protein | - |
| BY40_RS08950 (1843110) | 1843110..1843340 | + | 231 | Protein_1746 | ISAs1 family transposase ISEc1 | Transposase |
| BY40_RS08955 (1843393) | 1843393..1844070 | + | 678 | WP_001373818.1 | IS66 family transposase ISCro1 | Transposase |
| BY40_RS08960 (1844070) | 1844070..1844417 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| BY40_RS08965 (1844437) | 1844437..1846008 | + | 1572 | WP_000381359.1 | IS66 family transposase ISCro1 | Transposase |
| BY40_RS08970 (1846039) | 1846039..1846953 | + | 915 | Protein_1750 | ISAs1 family transposase ISEc1 | Transposase |
| BY40_RS08975 (1846994) | 1846994..1847764 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| BY40_RS08980 (1847945) | 1847945..1848391 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| BY40_RS08985 (1848434) | 1848434..1850878 | - | 2445 | WP_000973083.1 | hypothetical protein | VF |
| BY40_RS08990 (1851118) | 1851118..1851696 | + | 579 | WP_000284050.1 | hypothetical protein | VF |
| BY40_RS08995 (1851902) | 1851902..1852669 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| BY40_RS09000 (1852640) | 1852640..1853380 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| BY40_RS09005 (1853536) | 1853536..1853814 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| BY40_RS09010 (1853817) | 1853817..1854077 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| BY40_RS09015 (1854287) | 1854287..1855036 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| BY40_RS09020 (1855212) | 1855212..1855709 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| BY40_RS09025 (1855933) | 1855933..1857645 | - | 1713 | Protein_1761 | hypothetical protein | VF |
| BY40_RS09030 (1857617) | 1857617..1858402 | + | 786 | WP_000207552.1 | hypothetical protein | VF |
| BY40_RS09035 (1858473) | 1858473..1859528 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| BY40_RS09040 (1859580) | 1859580..1859873 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| BY40_RS09045 (1859876) | 1859876..1860274 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| BY40_RS09050 (1860284) | 1860284..1860655 | + | 372 | Protein_1766 | GNAT family N-acetyltransferase | - |
| BY40_RS09055 (1860686) | 1860686..1861654 | + | 969 | WP_073970534.1 | IS5 family transposase | - |
| BY40_RS09060 (1861710) | 1861710..1861802 | + | 93 | Protein_1768 | GNAT family N-acetyltransferase | - |
| BY40_RS09065 (1862120) | 1862120..1862326 | + | 207 | Protein_1769 | RtcB family protein | - |
| BY40_RS09070 (1862322) | 1862322..1862843 | + | 522 | Protein_1770 | peptide chain release factor H | - |
| BY40_RS09075 (1862900) | 1862900..1864357 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| BY40_RS09080 (1864618) | 1864618..1865076 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|