MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82638 bp
Accession: NZ_CP050856 Location: 1..82638 Organism: Serratia symbiotica strain CWBI-2.3 Replicon: plasmid pSsAf2.3-1
Accession: NZ_CP050856 Location: 1..82638 Organism: Serratia symbiotica strain CWBI-2.3 Replicon: plasmid pSsAf2.3-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SYMBAF_RS16470 () | 1..1047 | - | 1047 | WP_052447760.1 | hypothetical protein | - |
| SYMBAF_RS16475 () | 1542..2072 | - | 531 | WP_040265209.1 | Phospholipase D | VF |
| SYMBAF_RS16480 () | 2417..3154 | - | 738 | WP_040265211.1 | complement resistance protein TraT | - |
| SYMBAF_RS16485 () | 3313..6177 | - | 2865 | WP_052447761.1 | Multifunctional conjugation protein TraI | Relaxase |
| SYMBAF_RS16490 () | 6237..7405 | + | 1169 | WP_152609001.1 | IS3 family transposase ISLad1 | Transposase |
| SYMBAF_RS16495 () | 7303..8853 | - | 1551 | WP_082026936.1 | VirB4 family type IV secretion system protein | - |
| SYMBAF_RS16500 () | 8810..9181 | - | 372 | WP_040265226.1 | VirB3 family type IV secretion system protein | - |
| SYMBAF_RS16505 () | 9178..9513 | - | 336 | WP_052447762.1 | hypothetical protein | - |
| SYMBAF_RS16510 () | 9488..10165 | - | 678 | WP_040265215.1 | Type IV secretion system protein virB1 | VF |
| SYMBAF_RS16515 () | 10170..10598 | - | 429 | WP_185899938.1 | hypothetical protein | - |
| SYMBAF_RS16520 () | 10981..11535 | - | 555 | WP_082026937.1 | hypothetical protein | - |
| SYMBAF_RS16525 () | 11818..12360 | + | 543 | WP_040265217.1 | helix-turn-helix domain-containing protein | - |
| SYMBAF_RS16530 () | 12782..13558 | + | 777 | WP_185899939.1 | response regulator | - |
| SYMBAF_RS16535 () | 13568..13999 | + | 432 | WP_185899940.1 | GNAT family N-acetyltransferase | - |
| SYMBAF_RS16540 () | 14003..14452 | + | 450 | WP_185899941.1 | molybdopterin-dependent oxidoreductase | - |
| SYMBAF_RS16545 () | 14452..15738 | + | 1287 | WP_040265189.1 | HAMP domain-containing histidine kinase | - |
| SYMBAF_RS16550 () | 15904..16401 | + | 498 | WP_040265206.1 | hypothetical protein | - |
| SYMBAF_RS16555 () | 17027..17716 | + | 690 | WP_052447758.1 | tyrosine-type recombinase/integrase | - |
| SYMBAF_RS16560 () | 17908..18570 | + | 663 | WP_040265185.1 | ParA family protein | - |
| SYMBAF_RS16565 () | 18598..18903 | + | 306 | WP_040265184.1 | hypothetical protein | - |
| SYMBAF_RS16570 () | 19019..19675 | + | 657 | WP_052447757.1 | DUF4145 domain-containing protein | - |
| SYMBAF_RS16575 () | 19873..20187 | - | 315 | WP_040265182.1 | CcdB family protein | Toxin Detail |
| SYMBAF_RS16580 () | 20190..20426 | - | 237 | WP_040265181.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| SYMBAF_RS16585 () | 20873..21082 | + | 210 | WP_040265179.1 | hypothetical protein | - |
| SYMBAF_RS16590 () | 21128..21334 | - | 207 | Protein_24 | hypothetical protein | - |
| SYMBAF_RS16595 () | 21518..21853 | - | 336 | WP_152609113.1 | hypothetical protein | - |
| SYMBAF_RS16600 () | 21955..23123 | + | 1169 | WP_152609001.1 | IS3 family transposase ISLad1 | Transposase |
| SYMBAF_RS16605 () | 23642..25153 | - | 1512 | WP_052447755.1 | Multidrug export protein EmrB | VF |
| SYMBAF_RS16610 () | 25143..26171 | - | 1029 | WP_152609112.1 | Multidrug export protein EmrA | VF |
| SYMBAF_RS16615 () | 26161..27876 | - | 1716 | WP_040265171.1 | putative ABC transporter ATP-binding protein | VF |
| SYMBAF_RS16620 () | 27863..29596 | - | 1734 | WP_040265169.1 | Putative multidrug export ATP-binding/permease protein | VF |
| SYMBAF_RS16625 () | 29593..29997 | - | 405 | WP_040265167.1 | hypothetical protein | - |
| SYMBAF_RS16630 () | 29978..35431 | - | 5454 | WP_052447754.1 | Phenyloxazoline synthase MbtB | VF |
| SYMBAF_RS16635 () | 35730..48092 | + | 12363 | WP_152609111.1 | 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2 | VF |
| SYMBAF_RS16640 () | 48147..54170 | + | 6024 | WP_160289795.1 | Phthiocerol synthesis polyketide synthase type I PpsE | VF |
| SYMBAF_RS16645 () | 54167..55288 | + | 1122 | WP_040265166.1 | hypothetical protein | VF |
| SYMBAF_RS16650 () | 55275..57650 | + | 2376 | WP_052447751.1 | Linear gramicidin dehydrogenase LgrE | VF |
| SYMBAF_RS16655 () | 57580..58458 | - | 879 | WP_040265165.1 | HTH-type transcriptional regulator YesS | VF |
| SYMBAF_RS16660 () | 58596..60608 | + | 2013 | WP_040265163.1 | Pesticin receptor | VF |
| SYMBAF_RS16670 () | 61520..62386 | - | 867 | WP_185899942.1 | Recombination-promoting nuclease RpnA | VF |
| SYMBAF_RS16675 () | 62718..63170 | - | 453 | WP_185899936.1 | hypothetical protein | - |
| SYMBAF_RS16680 () | 63214..63522 | - | 309 | WP_185899943.1 | DUF4935 domain-containing protein | - |
| SYMBAF_RS16685 () | 64303..64710 | + | 408 | WP_185899937.1 | tyrosine-type recombinase/integrase | - |
| SYMBAF_RS16690 () | 64674..65020 | + | 347 | Protein_44 | tyrosine-type recombinase/integrase | - |
| SYMBAF_RS16695 () | 65136..65756 | + | 621 | WP_040265157.1 | ParA family protein | - |
| SYMBAF_RS16700 () | 65805..66032 | + | 228 | WP_040265155.1 | DNA partition complex ParG | - |
| SYMBAF_RS16705 () | 67170..67631 | + | 462 | WP_040265151.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SYMBAF_RS16710 () | 67631..68206 | + | 576 | WP_040265150.1 | PIN domain-containing protein | Toxin Detail |
| SYMBAF_RS16715 () | 68790..69452 | + | 663 | WP_040265149.1 | peptidyl-arginine deiminase | - |
| SYMBAF_RS16720 () | 69545..69826 | + | 282 | WP_040265148.1 | hypothetical protein | - |
| SYMBAF_RS16725 () | 70041..70682 | + | 642 | WP_052447749.1 | hypothetical protein | - |
| SYMBAF_RS16730 () | 71194..72234 | + | 1041 | WP_040265147.1 | IS481 family transposase ISErsp1 | Transposase |
| SYMBAF_RS16735 () | 72451..74928 | - | 2478 | WP_082026929.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| SYMBAF_RS16740 () | 75621..76883 | - | 1263 | WP_052447675.1 | group II intron reverse transcriptase/maturase | - |
| SYMBAF_RS16745 () | 78150..79412 | + | 1263 | WP_052447675.1 | group II intron reverse transcriptase/maturase | - |
| SYMBAF_RS16750 () | 79623..81794 | - | 2172 | WP_082026934.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|