MGE detailed information
MGE type: Prophage MGE length: 32608 bp
Accession: NZ_CP050691 Location: 2383249..2415856 Organism: Staphylococcus aureus strain PMB196-1 Replicon: chromosome
Accession: NZ_CP050691 Location: 2383249..2415856 Organism: Staphylococcus aureus strain PMB196-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HCU71_RS11360 () | 2379062..2379808 | - | 747 | WP_001822900.1 | S9 family peptidase | - |
| HCU71_RS11365 () | 2379813..2380286 | - | 474 | WP_000672013.1 | nucleoside triphosphatase YtkD | - |
| HCU71_RS11370 () | 2380352..2380609 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| HCU71_RS11375 () | 2380606..2381607 | - | 1002 | WP_000778528.1 | o-succinylbenzoate synthase | - |
| HCU71_RS11380 () | 2381612..2383090 | - | 1479 | WP_000348364.1 | o-succinylbenzoate--CoA ligase | - |
| HCU71_RS11385 () | 2383249..2383704 | - | 456 | WP_012840523.1 | DUF4909 domain-containing protein | - |
| HCU71_RS11390 () | 2384007..2384657 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
| HCU71_RS11395 () | 2384738..2385733 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
| HCU71_RS11400 () | 2385808..2386434 | + | 627 | WP_000669024.1 | hypothetical protein | - |
| HCU71_RS11405 () | 2386475..2386816 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
| HCU71_RS11410 () | 2386917..2387489 | + | 573 | WP_000414216.1 | hypothetical protein | - |
| HCU71_RS11415 () | 2387687..2388699 | - | 1013 | Protein_2236 | IS3 family transposase ISClsp1 | Transposase |
| HCU71_RS11420 () | 2388844..2388939 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 2388967..2389024 | - | 58 | - | - | Antitoxin Detail |
| HCU71_RS11425 () | 2389062..2389163 | + | 102 | WP_001792025.1 | hypothetical protein | - |
| HCU71_RS11430 () | 2389141..2389302 | - | 162 | Protein_2239 | transposase | - |
| HCU71_RS11435 () | 2389293..2389787 | - | 495 | Protein_2240 | IS21 family transposase IS232 | Transposase |
| HCU71_RS11440 () | 2390239..2391468 | - | 1230 | WP_000072627.1 | restriction endonuclease subunit S | - |
| HCU71_RS11445 () | 2391461..2393017 | - | 1557 | WP_209308239.1 | type I restriction-modification system subunit M | - |
| HCU71_RS11450 () | 2393181..2393315 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| HCU71_RS11455 () | 2393378..2394097 | - | 720 | WP_001038752.1 | Serine protease SplF | VF |
| HCU71_RS11460 () | 2394199..2394306 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| HCU71_RS11465 () | 2394255..2394974 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| HCU71_RS11470 () | 2395095..2395814 | - | 720 | WP_001038872.1 | Serine protease SplC | VF |
| HCU71_RS11475 () | 2395872..2396594 | - | 723 | WP_001039454.1 | Serine protease SplB | VF |
| HCU71_RS11480 () | 2396719..2397426 | - | 708 | WP_017431875.1 | Serine protease SplA | VF |
| HCU71_RS11485 () | 2398390..2398971 | + | 582 | WP_001092780.1 | DUF4888 domain-containing protein | - |
| HCU71_RS11490 () | 2399444..2399732 | - | 289 | Protein_2251 | BsaG protein | - |
| HCU71_RS11495 () | 2399918..2400391 | + | 474 | WP_000550252.1 | hypothetical protein | - |
| HCU71_RS11500 () | 2400396..2401187 | + | 792 | WP_000543854.1 | DUF1828 domain-containing protein | - |
| HCU71_RS11505 () | 2401557..2402540 | - | 984 | WP_000782463.1 | Leucotoxin LukDv | VF |
| HCU71_RS11510 () | 2402542..2403477 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| HCU71_RS13480 () | 2404372..2404803 | + | 432 | Protein_2256 | hypothetical protein | - |
| HCU71_RS11515 () | 2404840..2405628 | + | 789 | WP_000206344.1 | DUF1828 domain-containing protein | - |
| HCU71_RS11520 () | 2406462..2406956 | + | 495 | WP_001253432.1 | hypothetical protein | - |
| HCU71_RS11525 () | 2407034..2407270 | + | 237 | WP_000617704.1 | hypothetical protein | - |
| HCU71_RS11530 () | 2407291..2408067 | + | 777 | WP_000848318.1 | DUF1828 domain-containing protein | - |
| HCU71_RS11535 () | 2408619..2409395 | - | 777 | WP_000736712.1 | Enterotoxin type G | VF |
| HCU71_RS11540 () | 2409678..2410433 | - | 756 | WP_001236362.1 | Enterotoxin type A | VF |
| HCU71_RS11545 () | 2410472..2411243 | - | 772 | Protein_2263 | Enterotoxin type C-2 | VF |
| HCU71_RS11550 () | 2411397..2412125 | - | 729 | WP_000713847.1 | Enterotoxin type A | VF |
| HCU71_RS11555 () | 2412160..2412879 | - | 720 | WP_000821658.1 | Enterotoxin type D | VF |
| HCU71_RS11560 () | 2413160..2413942 | - | 783 | WP_010922839.1 | Enterotoxin type D | VF |
| HCU71_RS11605 () | 2415302..2415856 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| HCU71_RS11610 () | 2416179..2417579 | - | 1401 | WP_000167542.1 | protoporphyrinogen oxidase | - |
| HCU71_RS11615 () | 2417603..2418526 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| HCU71_RS11620 () | 2418584..2419621 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| HCU71_RS11625 () | 2419611..2419721 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| HCU71_RS11630 () | 2419884..2420387 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA20384 | NC_002745 | 1850940..1883547 | 0 |