NZ_CP0500481..105583

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 105583 bp
Accession: NZ_CP050048        Location: 1..105583         Organism: Escherichia coli strain 90-1       Replicon: plasmid pCD90-1-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
G9P52_RS22965 () 46..1077 + 1032 WP_080182593.1 replication initiation protein -
G9P52_RS22970 () 2019..2270 + 252 WP_001139206.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
G9P52_RS22975 () 2267..2554 + 288 WP_038976993.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
G9P52_RS22980 () 2842..3045 - 204 WP_038976994.1 alkaline phosphatase -
G9P52_RS22985 () 3035..3240 + 206 Protein_4 transposase -
G9P52_RS22990 () 3416..6913 - 3498 WP_113078458.1 Outer membrane protein IcsA autotransporter VF
G9P52_RS22995 () 7497..7741 - 245 Protein_6 IS91 family transposase -
G9P52_RS23000 () 7803..7961 - 159 Protein_7 AAA family ATPase -
G9P52_RS23005 () 7978..8700 - 723 Protein_8 IS3 family transposase IS1351 Transposase
G9P52_RS23010 () 8740..9953 + 1214 WP_188028020.1 IS3 family transposase ISCfr6 Transposase
G9P52_RS23015 () 9968..10350 - 383 Protein_10 transposase -
G9P52_RS23020 () 10433..10573 + 141 WP_001361733.1 hypothetical protein -
G9P52_RS23025 () 11129..11467 - 339 WP_000760914.1 c-type lysozyme inhibitor -
G9P52_RS23030 () 11626..11934 - 309 WP_000627058.1 PerC family transcriptional regulator -
G9P52_RS23035 () 12024..12758 + 735 WP_000578339.1 helix-turn-helix domain-containing protein -
G9P52_RS23040 () 12972..13310 + 339 WP_097756992.1 Serine acetyltransferase VF
G9P52_RS23045 () 13589..14182 - 594 WP_097756987.1 proQ/FINO family protein -
G9P52_RS23050 () 15081..15845 + 765 WP_000340226.1 helix-turn-helix domain-containing protein -
G9P52_RS23055 () 16009..17118 - 1110 WP_000737315.1 porin OmpC -
G9P52_RS23060 () 18138..18728 - 591 WP_000194574.1 hypothetical protein -
G9P52_RS23065 () 18728..18985 - 258 WP_001542562.1 hypothetical protein -
G9P52_RS23070 () 19554..19967 + 414 WP_113078464.1 hypothetical protein -
G9P52_RS23075 () 19969..20748 + 780 WP_113078462.1 site-specific integrase -
G9P52_RS23080 () 20928..21572 + 645 WP_001144036.1 ParA family protein -
G9P52_RS23085 () 21659..21967 + 309 WP_000030199.1 hypothetical protein -
G9P52_RS23090 () 22381..23361 + 981 WP_000688514.1 plasmid segregation protein ParM -
G9P52_RS23095 () 23354..23770 + 417 WP_001278818.1 plasmid partitioning/stability family protein -
G9P52_RS23100 () 23772..25046 - 1275 WP_063077240.1 Y-family DNA polymerase -
G9P52_RS23105 () 25046..25483 - 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
G9P52_RS23110 () 25480..25728 - 249 WP_000618111.1 DinI-like family protein -
G9P52_RS23115 () 26146..27048 + 903 WP_003981130.1 DUF1281 domain-containing protein -
G9P52_RS23120 () 27045..27355 + 311 Protein_31 hypothetical protein -
G9P52_RS23125 () 27432..28115 + 684 WP_000086174.1 DNA methylase -
G9P52_RS23130 () 28116..28337 + 222 WP_001104879.1 hypothetical protein -
G9P52_RS23135 () 28351..28785 + 435 WP_000274499.1 DUF1380 family protein -
G9P52_RS23140 () 28830..29600 + 771 WP_001006206.1 hypothetical protein -
G9P52_RS23145 () 30141..30443 + 303 WP_001671341.1 antirestriction protein -
G9P52_RS23150 () 30490..30912 + 423 WP_000271763.1 DUF1380 family protein -
G9P52_RS23155 () 30909..31100 + 192 WP_113078400.1 hypothetical protein -
G9P52_RS23160 () 31872..32399 + 528 WP_113078404.1 single-stranded DNA-binding protein -
G9P52_RS23165 () 32457..32690 + 234 WP_000006012.1 DUF905 family protein -
G9P52_RS23170 () 32749..34707 + 1959 WP_188028021.1 ParB/RepB/Spo0J family partition protein -
G9P52_RS23175 () 34762..35196 + 435 WP_000845897.1 conjugation system SOS inhibitor PsiB -
G9P52_RS23180 () 35193..35912 + 720 WP_001276262.1 plasmid SOS inhibition protein A -
G9P52_RS23185 () 35909..36505 + 597 WP_053291135.1 hypothetical protein -
G9P52_RS23190 () 36968..37468 + 501 WP_000117622.1 antirestriction protein ArdA -
G9P52_RS23195 () 38197..38631 + 435 WP_000218863.1 hypothetical protein -
G9P52_RS23200 () 38724..38990 + 267 WP_001247862.1 hypothetical protein -
G9P52_RS23205 () 39055..39969 + 915 WP_000038401.1 Recombination-promoting nuclease RpnA VF
G9P52_RS23210 () 39992..40189 + 198 WP_001348086.1 hypothetical protein -
G9P52_RS23215 () 40220..40471 - 252 WP_000148285.1 helix-turn-helix domain-containing protein -
G9P52_RS23220 () 40505..40702 - 198 WP_113078408.1 hypothetical protein -
G9P52_RS23225 () 41051..41899 + 849 WP_113078410.1 DUF4942 domain-containing protein -
G9P52_RS23230 () 42741..43088 - 348 WP_000907512.1 hypothetical protein -
G9P52_RS23235 () 43338..43652 + 315 WP_113078412.1 mobilization protein -
G9P52_RS23240 () 43681..46434 + 2754 WP_113078414.1 Protein TraI Relaxase
G9P52_RS23245 () 46470..48791 - 2322 WP_113078416.1 TraM recognition domain-containing protein -
G9P52_RS23250 () 48845..49330 - 486 WP_019842531.1 single-stranded DNA-binding protein -
G9P52_RS23255 () 49978..52359 - 2382 WP_001313395.1 glycoside hydrolase family 31 protein -
G9P52_RS23260 () 52374..53675 - 1302 WP_001329026.1 MFS transporter -
G9P52_RS23265 () 53937..55028 + 1092 WP_019842532.1 LacI family transcriptional regulator -
G9P52_RS23270 () 55110..56321 - 1212 WP_113078418.1 DsbC family protein -
G9P52_RS23275 () 56387..57580 - 1194 WP_188028016.1 hypothetical protein -
G9P52_RS23280 () 57596..59809 - 2214 WP_113078420.1 type IA DNA topoisomerase -
- () 59988..60048 - 61 NuclAT_0 - Antitoxin Detail
- () 59988..60048 - 61 NuclAT_0 - Antitoxin Detail
- () 59988..60048 - 61 NuclAT_0 - Antitoxin Detail
- () 59988..60048 - 61 NuclAT_0 - Antitoxin Detail
G9P52_RS23285 () 60100..60252 + 153 WP_023156060.1 Hok/Gef family protein Toxin Detail
G9P52_RS23290 () 60324..60575 - 252 WP_001685192.1 hypothetical protein -
G9P52_RS23295 () 60779..60985 + 207 WP_174217952.1 hypothetical protein -
G9P52_RS23300 () 61091..62041 - 951 WP_188028017.1 hypothetical protein -
G9P52_RS23305 () 62110..64254 - 2145 WP_113078422.1 DotA/TraY family protein -
G9P52_RS23310 () 64289..64513 - 225 WP_050869039.1 hypothetical protein -
G9P52_RS23315 () 64516..65079 - 564 WP_019842541.1 conjugal transfer protein TraX -
G9P52_RS23320 () 65076..66287 - 1212 WP_024186481.1 conjugal transfer protein TraW -
G9P52_RS23325 () 66384..69446 - 3063 WP_050869041.1 conjugal transfer protein -
G9P52_RS23330 () 69446..70153 - 708 WP_050869042.1 hypothetical protein -
G9P52_RS23335 () 70166..70702 - 537 WP_000906794.1 Phospholipase D VF
G9P52_RS23340 () 70753..71175 - 423 WP_019842545.1 hypothetical protein -
G9P52_RS23345 () 71214..71747 - 534 WP_113078424.1 conjugal transfer protein TraQ -
G9P52_RS23350 () 71747..72634 - 888 WP_096985725.1 conjugal transfer protein TraP -
G9P52_RS23355 () 72627..73922 - 1296 WP_113078426.1 conjugal transfer protein TraO -
G9P52_RS23360 () 73926..74873 - 948 WP_019842549.1 hypothetical protein VF
G9P52_RS23365 () 74890..75588 - 699 WP_019842550.1 DotI/IcmL family type IV secretion protein -
G9P52_RS23370 () 75596..75985 - 390 WP_021560342.1 hypothetical protein -
G9P52_RS23375 () 76042..79758 - 3717 WP_162733163.1 DNA primase -
G9P52_RS23380 () 79863..80150 - 288 WP_021560340.1 hypothetical protein -
G9P52_RS23385 () 80160..81317 - 1158 WP_021560339.1 putative protein YggR VF
G9P52_RS23390 () 81317..82129 - 813 WP_054175616.1 hypothetical protein VF
G9P52_RS23395 () 82132..82581 - 450 WP_021560337.1 DotD/TraH family lipoprotein -
G9P52_RS23400 () 82627..82815 - 189 WP_100033979.1 hypothetical protein -
G9P52_RS23405 () 83527..84729 - 1203 WP_054175615.1 conjugal transfer protein TraF -
G9P52_RS23410 () 84815..85639 - 825 WP_188028018.1 conjugal transfer protein TraE -
G9P52_RS23415 () 85790..86950 - 1161 WP_019842560.1 integrase -
G9P52_RS23420 () 88392..89840 - 1449 WP_112928415.1 shufflon system plasmid conjugative transfer pilus tip adhesin PilV -
G9P52_RS23425 () 89849..90424 - 576 WP_021560331.1 prepilin peptidase -
G9P52_RS23430 () 90436..90936 - 501 WP_021560330.1 hypothetical protein VF
G9P52_RS23435 () 90984..91589 - 606 WP_113078432.1 hypothetical protein VF
G9P52_RS23440 () 91614..92678 - 1065 WP_113078434.1 Toxin coregulated pilus biosynthesis protein E VF
G9P52_RS23445 () 92668..94206 - 1539 WP_113078436.1 Putative type II secretion system protein E VF
G9P52_RS23450 () 94196..94645 - 450 WP_021560326.1 type IV pilus biogenesis protein PilP -
G9P52_RS23455 () 94638..95945 - 1308 WP_021560325.1 type 4b pilus protein PilO2 -
G9P52_RS23460 () 95953..97599 - 1647 WP_021560324.1 Outer membrane lipoprotein BfpB VF
G9P52_RS23465 () 97616..98086 - 471 WP_113078438.1 type IV pilus biogenesis protein PilM -
G9P52_RS23470 () 98098..99144 - 1047 WP_162733164.1 hypothetical protein VF
G9P52_RS23475 () 99573..100268 - 696 WP_113078443.1 hypothetical protein -
G9P52_RS23480 () 100367..100621 - 255 WP_021560320.1 PilI type IV pilus biogenesis protein -
G9P52_RS23485 () 100783..101367 - 585 WP_113078448.1 hypothetical protein -
G9P52_RS23490 () 101364..101642 - 279 WP_113078450.1 hypothetical protein -
G9P52_RS23495 () 101671..102252 - 582 WP_113078452.1 hypothetical protein -
G9P52_RS23500 () 102266..102946 - 681 WP_188028019.1 conjugal transfer protein TraC -
G9P52_RS23505 () 103210..103743 - 534 WP_021560316.1 hypothetical protein -
G9P52_RS23510 () 104189..104476 - 288 WP_019842580.1 conjugal transfer protein TraA -
G9P52_RS23515 () 104394..104657 - 264 Protein_110 ash family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance