MGE detailed information
MGE type: Conjugative plasmid MGE length: 101847 bp
Accession: NZ_CP049970 Location: 1..101847 Organism: Escherichia coli strain ARL09/232 Replicon: plasmid pCO_Eco4457-3
Accession: NZ_CP049970 Location: 1..101847 Organism: Escherichia coli strain ARL09/232 Replicon: plasmid pCO_Eco4457-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9448_RS25500 () | 1301..2041 | - | 741 | WP_001586233.1 | tyrosine-type recombinase/integrase | - |
| G9448_RS25505 () | 2162..2344 | - | 183 | WP_042004909.1 | hypothetical protein | - |
| G9448_RS25510 () | 2411..2572 | - | 162 | WP_001440647.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| G9448_RS25515 () | 2688..2956 | - | 269 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
| G9448_RS25520 () | 3252..3992 | - | 741 | WP_029702141.1 | IS91 family transposase ISMno23 | Transposase |
| G9448_RS25525 () | 4032..4729 | - | 698 | Protein_6 | IS1 family transposase IS1X2 | Transposase |
| G9448_RS25530 () | 4945..5394 | - | 450 | WP_029702172.1 | hypothetical protein | - |
| G9448_RS25535 () | 5921..6444 | + | 524 | Protein_8 | IS1 family transposase | - |
| G9448_RS25540 () | 6536..6817 | - | 282 | Protein_9 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| G9448_RS25545 () | 7073..8405 | - | 1333 | Protein_10 | group II intron reverse transcriptase/maturase | - |
| G9448_RS25550 () | 9022..9882 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| G9448_RS25555 () | 10065..10622 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| G9448_RS25560 () | 10786..13239 | + | 2454 | Protein_13 | Tn3 family transposase TnpA_Tn3 | Transposase |
| G9448_RS25565 () | 13304..14008 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G9448_RS25570 () | 14074..14619 | + | 546 | Protein_15 | Tn3 family transposase TnpA_Tn3 | Transposase |
| G9448_RS25575 () | 14655..15070 | - | 416 | Protein_16 | IS1 family transposase | - |
| G9448_RS25580 () | 15319..15720 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| G9448_RS25585 () | 15653..15910 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| G9448_RS25590 () | 16003..16656 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| G9448_RS25595 () | 16754..16894 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| G9448_RS25600 () | 17595..18452 | - | 858 | WP_029702152.1 | incFII family plasmid replication initiator RepA | - |
| G9448_RS25605 () | 18445..18519 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| G9448_RS25610 () | 18755..19012 | - | 258 | WP_000083833.1 | replication regulatory protein RepA | - |
| G9448_RS25615 () | 19296..19502 | - | 207 | WP_032215358.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 19489..19550 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 19489..19550 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 19489..19550 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| - () | 19489..19550 | + | 62 | NuclAT_0 | - | Antitoxin Detail |
| G9448_RS25620 () | 19689..19955 | - | 267 | WP_087757657.1 | hypothetical protein | - |
| G9448_RS25625 () | 20330..20899 | - | 570 | WP_029702150.1 | DUF2726 domain-containing protein | - |
| G9448_RS25630 () | 21051..21677 | - | 627 | WP_029702149.1 | hypothetical protein | - |
| G9448_RS25635 () | 22089..22298 | - | 210 | WP_039023209.1 | hypothetical protein | - |
| G9448_RS25640 () | 22429..22989 | - | 561 | WP_001567328.1 | fertility inhibition protein FinO | - |
| G9448_RS25645 () | 23044..23790 | - | 747 | WP_052273601.1 | conjugal transfer pilus acetylase TraX | - |
| G9448_RS25650 () | 23818..24564 | - | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| G9448_RS25655 () | 24579..26120 | - | 1542 | WP_002431311.1 | IS21 family transposase ISEc12 | Transposase |
| G9448_RS25660 () | 26396..31666 | - | 5271 | WP_039052472.1 | Multifunctional conjugation protein TraI | Relaxase |
| G9448_RS25665 () | 31748..31975 | + | 228 | WP_039023146.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| G9448_RS25670 () | 31975..32373 | + | 399 | WP_039023147.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| G9448_RS25675 () | 32382..34589 | - | 2208 | WP_039052471.1 | type IV conjugative transfer system coupling protein TraD | - |
| G9448_RS25680 () | 34842..35573 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| G9448_RS25685 () | 35605..36102 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| G9448_RS25690 () | 36121..38940 | - | 2820 | WP_039023149.1 | conjugal transfer mating pair stabilization protein TraG | - |
| G9448_RS25695 () | 38937..40310 | - | 1374 | WP_039023150.1 | conjugal transfer protein TraH | - |
| G9448_RS25700 () | 40310..40672 | - | 363 | WP_071550055.1 | P-type conjugative transfer protein TrbJ | - |
| G9448_RS25705 () | 40602..41147 | - | 546 | WP_039052470.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| G9448_RS25710 () | 41134..41418 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| G9448_RS25715 () | 41537..41884 | - | 348 | WP_001287894.1 | conjugal transfer protein TrbA | - |
| G9448_RS25720 () | 41900..42643 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| G9448_RS25725 () | 42636..42893 | - | 258 | WP_039023152.1 | conjugal transfer protein TrbE | - |
| G9448_RS25730 () | 42920..44707 | - | 1788 | WP_039052473.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| G9448_RS25735 () | 45018..45398 | - | 381 | WP_039052469.1 | hypothetical protein | - |
| G9448_RS25740 () | 45395..46033 | - | 639 | WP_039052468.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| G9448_RS25745 () | 46042..47034 | - | 993 | WP_000830835.1 | conjugal transfer pilus assembly protein TraU | - |
| G9448_RS25750 () | 47031..47663 | - | 633 | WP_039052467.1 | type-F conjugative transfer system protein TraW | - |
| G9448_RS25755 () | 47660..48046 | - | 387 | WP_000099693.1 | type-F conjugative transfer system protein TrbI | - |
| G9448_RS25760 () | 48043..50670 | - | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| G9448_RS25765 () | 50830..51051 | - | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| G9448_RS25770 () | 51186..51701 | - | 516 | WP_039052466.1 | type IV conjugative transfer system lipoprotein TraV | - |
| G9448_RS25775 () | 51698..51949 | - | 252 | WP_039052465.1 | conjugal transfer protein TrbG | - |
| G9448_RS25780 () | 51942..52310 | - | 369 | WP_071550054.1 | conjugal transfer protein TrbD | - |
| G9448_RS25785 () | 52249..52830 | - | 582 | WP_052273600.1 | conjugal transfer protein TraP | - |
| G9448_RS25790 () | 52799..54250 | - | 1452 | WP_039052463.1 | conjugal transfer protein TraB | - |
| G9448_RS25795 () | 54250..54954 | - | 705 | WP_148936096.1 | type-F conjugative transfer system secretin TraK | - |
| G9448_RS25800 () | 54965..55531 | - | 567 | WP_039052461.1 | type IV conjugative transfer system protein TraE | - |
| G9448_RS25805 () | 55553..55864 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| G9448_RS25810 () | 55869..56231 | - | 363 | WP_039052460.1 | type IV conjugative transfer system pilin TraA | - |
| G9448_RS25815 () | 56264..56659 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| G9448_RS25820 () | 56758..57447 | - | 690 | WP_061856953.1 | conjugal transfer transcriptional regulator TraJ | - |
| G9448_RS25825 () | 57634..58017 | - | 384 | WP_061856954.1 | relaxosome protein TraM | - |
| G9448_RS25830 () | 58337..58939 | + | 603 | WP_077878371.1 | hypothetical protein | VF |
| G9448_RS25835 () | 59235..60056 | - | 822 | WP_061856956.1 | DUF945 domain-containing protein | - |
| G9448_RS25840 () | 60175..60462 | - | 288 | WP_061856957.1 | hypothetical protein | - |
| G9448_RS25845 () | 60763..61091 | + | 329 | Protein_70 | hypothetical protein | - |
| G9448_RS25850 () | 61082..61213 | + | 132 | Protein_71 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| G9448_RS25855 () | 61293..61990 | - | 698 | Protein_72 | IS1 family transposase IS1G | Transposase |
| G9448_RS25860 () | 62163..62780 | + | 618 | Protein_73 | ISL3 family transposase ISEc38 | Transposase |
| G9448_RS25865 () | 63244..64251 | - | 1008 | WP_001232702.1 | LacI family DNA-binding transcriptional regulator | - |
| G9448_RS25870 () | 64277..65686 | - | 1410 | WP_039052598.1 | sucrose-6-phosphate hydrolase | - |
| G9448_RS25875 () | 65686..67056 | - | 1371 | WP_000344915.1 | sucrose-specific PTS transporter subunit IIBC | - |
| G9448_RS25880 () | 67117..68634 | - | 1518 | WP_039052597.1 | carbohydrate porin | - |
| G9448_RS25885 () | 68802..69722 | - | 921 | WP_039052596.1 | aminoimidazole riboside kinase | - |
| G9448_RS25890 () | 70083..70441 | + | 359 | Protein_79 | pilus protein | - |
| G9448_RS25895 () | 70422..70985 | - | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| G9448_RS25900 () | 71033..72394 | - | 1362 | WP_039052595.1 | DUF3560 domain-containing protein | - |
| G9448_RS25905 () | 72446..72675 | - | 230 | Protein_82 | hypothetical protein | - |
| G9448_RS25910 () | 73190..73649 | + | 460 | Protein_83 | hypothetical protein | - |
| G9448_RS25915 () | 73628..73819 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| G9448_RS25920 () | 73868..74170 | - | 303 | WP_077878372.1 | antirestriction protein | - |
| G9448_RS25925 () | 74709..75158 | - | 450 | Protein_86 | hypothetical protein | - |
| G9448_RS25930 () | 75335..75691 | + | 357 | WP_039052614.1 | hypothetical protein | - |
| G9448_RS25935 () | 75729..76382 | + | 654 | WP_039052615.1 | hypothetical protein | - |
| G9448_RS25940 () | 76496..77193 | + | 698 | Protein_89 | IS1 family transposase IS1G | Transposase |
| G9448_RS25945 () | 77211..78878 | + | 1668 | Protein_90 | UvrD-helicase domain-containing protein | - |
| G9448_RS25950 () | 79221..80201 | + | 981 | WP_176608028.1 | IS5 family transposase ISKpn26 | Transposase |
| G9448_RS25955 () | 80760..81706 | + | 947 | Protein_92 | DUF4113 domain-containing protein | - |
| G9448_RS25960 () | 81711..82103 | - | 393 | WP_039052449.1 | plasmid partitioning/stability family protein | - |
| G9448_RS25965 () | 82108..83079 | - | 972 | WP_039052450.1 | plasmid segregation protein parM | - |
| G9448_RS25970 () | 83308..83952 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| G9448_RS25975 () | 83946..84221 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| G9448_RS25980 () | 84359..84859 | - | 501 | Protein_97 | IS91 family transposase ISAzo26 | Transposase |
| G9448_RS25985 () | 84841..85080 | - | 240 | WP_157916581.1 | resolvase | - |
| G9448_RS25990 () | 85187..85795 | - | 609 | WP_039052451.1 | hypothetical protein | - |
| G9448_RS25995 () | 85865..86215 | - | 351 | WP_039052452.1 | hypothetical protein | - |
| G9448_RS26000 () | 86893..87888 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| G9448_RS26005 () | 87892..88824 | + | 933 | WP_000991831.1 | hypothetical protein | - |
| G9448_RS26010 () | 89117..89302 | + | 186 | WP_001586223.1 | hypothetical protein | - |
| G9448_RS26015 () | 89303..90205 | + | 903 | WP_024187432.1 | hypothetical protein | - |
| G9448_RS26020 () | 90207..91076 | + | 870 | WP_001586225.1 | hypothetical protein | - |
| G9448_RS26025 () | 91133..92698 | - | 1566 | WP_001586226.1 | ATP-binding protein | - |
| G9448_RS26030 () | 92985..93497 | + | 513 | WP_176608029.1 | hypothetical protein | - |
| G9448_RS26035 () | 93531..94664 | - | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| G9448_RS26040 () | 94831..95603 | - | 773 | Protein_109 | hypothetical protein | - |
| G9448_RS26045 () | 95632..96117 | - | 486 | WP_001403958.1 | hypothetical protein | - |
| G9448_RS26050 () | 96508..99129 | + | 2622 | WP_001586230.1 | hypothetical protein | - |
| G9448_RS26055 () | 99328..99558 | + | 231 | WP_001261274.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| G9448_RS26060 () | 99555..99922 | + | 368 | Protein_113 | type II toxin-antitoxin system VapC family toxin | - |
| G9448_RS26065 () | 99927..100099 | - | 173 | Protein_114 | transposase | - |
| G9448_RS26070 () | 100145..100675 | - | 531 | WP_000348883.1 | GNAT family N-acetyltransferase | - |
| G9448_RS26075 () | 100679..100948 | - | 270 | WP_001275013.1 | DUF1778 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|