MGE detailed information
MGE type: Mobilizable plasmid MGE length: 65023 bp
Accession: NZ_CP049356 Location: 1..65023 Organism: Escherichia coli strain T28R Replicon: plasmid pT28R-3
Accession: NZ_CP049356 Location: 1..65023 Organism: Escherichia coli strain T28R Replicon: plasmid pT28R-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G7B60_RS24135 () | 1..1029 | + | 1029 | WP_024172575.1 | replication initiation protein | - |
| G7B60_RS24145 () | 2433..2594 | + | 162 | WP_001434039.1 | type I toxin-antitoxin system Hok family toxin | - |
| G7B60_RS24150 () | 2743..3339 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| G7B60_RS24620 () | 3357..3641 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| G7B60_RS24160 () | 3715..4380 | - | 666 | WP_015387337.1 | P-loop NTPase | - |
| G7B60_RS24165 () | 4967..5296 | + | 330 | WP_000855119.1 | hypothetical protein | - |
| G7B60_RS24170 () | 5700..6215 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| G7B60_RS24175 () | 6319..6861 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| G7B60_RS24180 () | 6858..7112 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| G7B60_RS24185 () | 7109..7351 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| G7B60_RS24190 () | 7488..7820 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| G7B60_RS24195 () | 7867..8742 | - | 876 | WP_032492042.1 | Beta-lactamase CTX-M-1 | ARG |
| G7B60_RS24200 () | 8995..10257 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| G7B60_RS24205 () | 11007..11300 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| G7B60_RS24210 () | 11789..12037 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| G7B60_RS24215 () | 12034..12381 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| G7B60_RS24220 () | 12469..12651 | - | 183 | WP_001428470.1 | hypothetical protein | - |
| G7B60_RS24225 () | 13153..13452 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| G7B60_RS24230 () | 13712..14038 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| G7B60_RS24235 () | 14040..14480 | - | 441 | WP_023223352.1 | hypothetical protein | - |
| G7B60_RS24240 () | 14500..15207 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| G7B60_RS24245 () | 15209..15961 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| G7B60_RS24250 () | 15979..16380 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| G7B60_RS24255 () | 16748..17089 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| G7B60_RS24260 () | 17086..21399 | + | 4314 | Protein_24 | relaxase | - |
| G7B60_RS24265 () | 21620..23245 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| G7B60_RS24270 () | 23317..24090 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| G7B60_RS24275 () | 24049..24489 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| G7B60_RS24280 () | 24835..25041 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| G7B60_RS24285 () | 25110..27275 | - | 2166 | WP_034169408.1 | type IA DNA topoisomerase | - |
| G7B60_RS24290 () | 27280..27855 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| G7B60_RS24295 () | 28025..29413 | - | 1389 | WP_072770489.1 | PcfJ domain-containing protein | - |
| G7B60_RS24300 () | 29663..30891 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| G7B60_RS24305 () | 31132..31647 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| G7B60_RS24310 () | 31694..32347 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| G7B60_RS24315 () | 32359..33483 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| G7B60_RS24325 () | 35241..36485 | - | 1245 | WP_000750517.1 | hypothetical protein | VF |
| G7B60_RS24330 () | 36498..37133 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| G7B60_RS24335 () | 37137..37619 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| G7B60_RS24340 () | 37685..38248 | - | 564 | WP_034169414.1 | hypothetical protein | - |
| G7B60_RS24345 () | 38298..39407 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| G7B60_RS24350 () | 39398..40936 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| G7B60_RS24355 () | 40961..41455 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| G7B60_RS24360 () | 41439..42761 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| G7B60_RS24365 () | 42800..44443 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| G7B60_RS24370 () | 44436..44972 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| G7B60_RS24375 () | 45019..46977 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| G7B60_RS24380 () | 46993..48048 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| G7B60_RS24385 () | 48067..49206 | - | 1140 | WP_034169415.1 | Type IV secretion system protein virB10 | VF |
| G7B60_RS24390 () | 49196..49897 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| G7B60_RS24395 () | 49963..50697 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| G7B60_RS24405 () | 50863..53220 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| G7B60_RS24410 () | 53226..53546 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| G7B60_RS24415 () | 53617..53805 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| G7B60_RS24420 () | 53907..54491 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| G7B60_RS24425 () | 54512..54910 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| G7B60_RS24430 () | 55029..55466 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| G7B60_RS24435 () | 55472..56707 | - | 1236 | WP_034169417.1 | hypothetical protein | VF |
| G7B60_RS24440 () | 56710..57009 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| G7B60_RS24445 () | 57057..57866 | + | 810 | WP_024237698.1 | hypothetical protein | - |
| G7B60_RS24450 () | 58089..58313 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| G7B60_RS24455 () | 58322..58966 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| G7B60_RS24460 () | 58972..59967 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| G7B60_RS24465 () | 59971..60228 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| G7B60_RS24470 () | 60225..60527 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| G7B60_RS24625 () | 60508..60765 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| G7B60_RS24475 () | 60798..61244 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| G7B60_RS24480 () | 61255..61425 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| G7B60_RS24485 () | 61429..61872 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| G7B60_RS24490 () | 62246..63199 | - | 954 | WP_072105959.1 | SPFH/Band 7/PHB domain protein | - |
| G7B60_RS24495 () | 63245..63439 | - | 195 | WP_000049865.1 | DUF1187 family protein | - |
| G7B60_RS24500 () | 63432..63938 | - | 507 | WP_001358485.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|