MGE detailed information
MGE type: Conjugative plasmid MGE length: 68949 bp
Accession: NZ_CP049351 Location: 1..68949 Organism: Escherichia coli strain 3R Replicon: plasmid p3R-3
Accession: NZ_CP049351 Location: 1..68949 Organism: Escherichia coli strain 3R Replicon: plasmid p3R-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6Q95_RS24660 () | 82..326 | - | 245 | Protein_1 | traP family protein | - |
| G6Q95_RS24665 () | 326..670 | - | 345 | Protein_2 | conjugal transfer protein TraP | - |
| G6Q95_RS25545 () | 660..2082 | - | 1423 | Protein_3 | conjugal transfer protein TraB | - |
| G6Q95_RS24675 () | 2082..2809 | - | 728 | Protein_4 | type-F conjugative transfer system secretin TraK | - |
| G6Q95_RS24680 () | 2796..3361 | - | 566 | Protein_5 | type IV conjugative transfer system protein TraE | - |
| G6Q95_RS24685 () | 3383..3694 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| G6Q95_RS24690 () | 3709..4074 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| G6Q95_RS24695 () | 4108..4335 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| G6Q95_RS24700 () | 4429..5115 | - | 687 | WP_001825184.1 | PAS domain-containing protein | - |
| G6Q95_RS24705 () | 5306..5689 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| G6Q95_RS24710 () | 5966..6613 | + | 648 | WP_001825185.1 | hypothetical protein | VF |
| G6Q95_RS24715 () | 6910..7731 | - | 822 | WP_001234437.1 | DUF945 domain-containing protein | - |
| G6Q95_RS24720 () | 7842..8138 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| G6Q95_RS25550 () | 8438..8815 | + | 378 | Protein_14 | hypothetical protein | - |
| G6Q95_RS24735 () | 9053..9211 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 9255..9479 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 9255..9479 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 9255..9479 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 9255..9479 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| G6Q95_RS24740 () | 9291..9470 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| G6Q95_RS24745 () | 9491..10210 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| G6Q95_RS24750 () | 10207..10641 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| G6Q95_RS24755 () | 10710..12733 | - | 2024 | Protein_19 | ParB/RepB/Spo0J family partition protein | - |
| G6Q95_RS24760 () | 12794..13027 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| G6Q95_RS24765 () | 13085..13612 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| G6Q95_RS25555 () | 13914..14369 | + | 456 | WP_001424978.1 | hypothetical protein | - |
| G6Q95_RS24780 () | 14455..15018 | - | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| G6Q95_RS24785 () | 15065..16426 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| G6Q95_RS24790 () | 16478..16708 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| G6Q95_RS24795 () | 18108..19775 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| G6Q95_RS24800 () | 20089..20280 | - | 192 | WP_001027493.1 | hypothetical protein | - |
| G6Q95_RS24805 () | 20277..20699 | - | 423 | WP_000271762.1 | DUF1380 family protein | - |
| G6Q95_RS24810 () | 20746..21048 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| G6Q95_RS24815 () | 21219..21974 | - | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| G6Q95_RS24820 () | 21991..23524 | - | 1534 | Protein_31 | IS21 family transposase ISSso4 | Transposase |
| G6Q95_RS25560 () | 23756..23900 | - | 145 | Protein_32 | antirestriction protein | - |
| G6Q95_RS25565 () | 24230..25006 | - | 777 | WP_001383963.1 | hypothetical protein | - |
| G6Q95_RS24840 () | 25057..25491 | - | 435 | WP_000274503.1 | DUF1380 family protein | - |
| G6Q95_RS24845 () | 25505..25726 | - | 222 | WP_001104881.1 | hypothetical protein | - |
| G6Q95_RS24850 () | 25727..26410 | - | 684 | WP_000085883.1 | DNA methylase | - |
| G6Q95_RS24855 () | 26487..26780 | - | 294 | WP_032146011.1 | hypothetical protein | - |
| G6Q95_RS24860 () | 26927..27889 | + | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| G6Q95_RS24865 () | 27892..28242 | + | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| G6Q95_RS24870 () | 28365..28646 | - | 282 | WP_001333089.1 | hypothetical protein | - |
| G6Q95_RS24875 () | 28774..29008 | - | 235 | Protein_41 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| G6Q95_RS25570 () | 30457..30522 | - | 66 | Protein_42 | IS1 family transposase | - |
| G6Q95_RS24885 () | 30588..31292 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| G6Q95_RS24890 () | 31380..31661 | + | 282 | WP_015059004.1 | sodium/hydrogen exchanger | - |
| G6Q95_RS24895 () | 31742..32497 | - | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| G6Q95_RS24900 () | 32667..33527 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| G6Q95_RS24905 () | 33710..34246 | - | 537 | WP_064441864.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| G6Q95_RS24910 () | 34338..34526 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| G6Q95_RS24915 () | 34536..35735 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| G6Q95_RS24920 () | 35942..36199 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| G6Q95_RS24925 () | 36292..36945 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| G6Q95_RS24930 () | 37043..37183 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| G6Q95_RS24935 () | 37884..38741 | - | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| G6Q95_RS24940 () | 38734..38808 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| G6Q95_RS24945 () | 39053..39301 | - | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| G6Q95_RS24950 () | 39585..39734 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 39779..39838 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 39779..39838 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 39779..39838 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 39779..39838 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| G6Q95_RS24955 () | 40433..41032 | - | 600 | WP_032083981.1 | hypothetical protein | - |
| G6Q95_RS24960 () | 41418..41618 | - | 201 | WP_015059022.1 | hypothetical protein | - |
| G6Q95_RS24965 () | 41750..42310 | - | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| G6Q95_RS24970 () | 42365..42847 | - | 483 | Protein_60 | type-F conjugative transfer system pilin acetylase TraX | - |
| G6Q95_RS24975 () | 42853..43395 | - | 543 | Protein_61 | Multifunctional conjugation protein TraI | Relaxase |
| G6Q95_RS24980 () | 43395..45611 | - | 2217 | WP_059274178.1 | type IV conjugative transfer system coupling protein TraD | - |
| G6Q95_RS24985 () | 45662..46399 | - | 738 | WP_015059020.1 | hypothetical protein | - |
| G6Q95_RS24995 () | 47954..48685 | - | 732 | WP_021559024.1 | complement resistance protein TraT | - |
| G6Q95_RS25000 () | 48710..49231 | - | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| G6Q95_RS25005 () | 49264..52080 | - | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| G6Q95_RS25010 () | 52077..53450 | - | 1374 | WP_000944325.1 | conjugal transfer protein TraH | - |
| G6Q95_RS25015 () | 53437..53829 | - | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| G6Q95_RS25020 () | 53783..54157 | - | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| G6Q95_RS25025 () | 54087..54254 | - | 168 | Protein_71 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| G6Q95_RS25030 () | 54347..55102 | - | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| G6Q95_RS25035 () | 55119..56653 | - | 1535 | Protein_73 | IS21 family transposase ISSso4 | Transposase |
| G6Q95_RS25040 () | 56890..57276 | - | 387 | Protein_74 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| G6Q95_RS25045 () | 57263..57544 | - | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| G6Q95_RS25050 () | 57660..58403 | - | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| G6Q95_RS25055 () | 58396..58653 | - | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| G6Q95_RS25060 () | 58680..60530 | - | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| G6Q95_RS25065 () | 60527..60949 | - | 423 | WP_001229309.1 | HNH endonuclease | - |
| G6Q95_RS25070 () | 60975..61346 | - | 372 | WP_000056336.1 | hypothetical protein | - |
| G6Q95_RS25075 () | 61343..61981 | - | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| G6Q95_RS25080 () | 62008..62529 | - | 522 | WP_015059014.1 | hypothetical protein | - |
| G6Q95_RS25085 () | 62592..62900 | - | 309 | WP_000412447.1 | hypothetical protein | - |
| G6Q95_RS25090 () | 62927..63919 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| G6Q95_RS25095 () | 63916..64548 | - | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| G6Q95_RS25100 () | 64545..64931 | - | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| G6Q95_RS25105 () | 64928..67555 | - | 2628 | WP_072646547.1 | type IV secretion system protein TraC | - |
| G6Q95_RS25110 () | 67715..67936 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| G6Q95_RS25115 () | 68071..68586 | - | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| G6Q95_RS25120 () | 68583..68834 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|