MGE detailed information
MGE type: Prophage MGE length: 77330 bp
Accession: NZ_CP049110 Location: 3492285..3569614 Organism: Escherichia coli strain WF5-5-T1 Replicon: chromosome
Accession: NZ_CP049110 Location: 3492285..3569614 Organism: Escherichia coli strain WF5-5-T1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5631_RS17055 (3488128) | 3488128..3491202 | + | 3075 | WP_000177906.1 | beta-galactosidase | - |
| G5631_RS17060 (3491254) | 3491254..3492228 | + | 975 | Protein_3332 | lactose permease | - |
| G5631_RS17065 (3492285) | 3492285..3492982 | + | 698 | WP_094096600.1 | IS1 family transposase IS1A | Transposase |
| G5631_RS17070 (3492991) | 3492991..3493083 | + | 93 | Protein_3334 | sigma factor-binding protein Crl | - |
| G5631_RS17075 (3493122) | 3493122..3494177 | - | 1056 | WP_103119219.1 | phosphoporin PhoE | - |
| G5631_RS17080 (3494465) | 3494465..3495568 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| G5631_RS17085 (3495580) | 3495580..3496833 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| G5631_RS17095 (3497405) | 3497405..3497746 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| G5631_RS17100 (3497767) | 3497767..3498084 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| G5631_RS17105 (3498103) | 3498103..3498324 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| G5631_RS17110 (3498333) | 3498333..3498809 | - | 477 | WP_000811693.1 | RadC family protein | - |
| G5631_RS17115 (3498825) | 3498825..3499283 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| G5631_RS17120 (3499381) | 3499381..3499620 | - | 240 | WP_000194654.1 | DUF905 family protein | - |
| G5631_RS17125 (3499697) | 3499697..3500164 | - | 468 | WP_001547765.1 | protein YkfB | - |
| G5631_RS17130 (3500187) | 3500187..3500630 | - | 444 | WP_000824223.1 | lipoprotein YafY | - |
| G5631_RS17135 (3500630) | 3500630..3500857 | - | 228 | WP_001548158.1 | protein YpjK | - |
| G5631_RS17140 (3500853) | 3500853..3501044 | - | 192 | Protein_3347 | DeoR family transcriptional regulator | - |
| G5631_RS17145 (3501261) | 3501261..3502082 | - | 822 | WP_000197389.1 | DUF932 domain-containing protein | - |
| G5631_RS17150 (3502174) | 3502174..3503037 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| G5631_RS17155 (3503366) | 3503366..3504259 | - | 894 | WP_000770246.1 | LysR substrate-binding domain-containing protein | - |
| G5631_RS17160 (3504355) | 3504355..3504612 | + | 258 | Protein_3351 | IS3 family transposase ISEc52 | Transposase |
| G5631_RS17165 (3504680) | 3504680..3505831 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| G5631_RS17170 (3505841) | 3505841..3506266 | + | 426 | Protein_3353 | IS3 family transposase | - |
| G5631_RS17175 (3506939) | 3506939..3508030 | + | 1092 | Protein_3354 | reverse transcriptase domain-containing protein | - |
| G5631_RS17185 (3509401) | 3509401..3510804 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| G5631_RS17190 (3510791) | 3510791..3511723 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| G5631_RS17195 (3511832) | 3511832..3512878 | - | 1047 | WP_000192349.1 | hypothetical protein | VF |
| G5631_RS17200 (3512890) | 3512890..3513237 | - | 348 | Protein_3359 | ABC transporter permease subunit | - |
| G5631_RS17210 (3514007) | 3514007..3514180 | + | 174 | Protein_3361 | IS30 family transposase | - |
| G5631_RS17215 (3514190) | 3514190..3514438 | - | 249 | Protein_3362 | IS3 family transposase ISEhe3 | Transposase |
| G5631_RS17220 (3514461) | 3514461..3514811 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| G5631_RS17225 (3514825) | 3514825..3514890 | - | 66 | Protein_3364 | hypothetical protein | - |
| G5631_RS17230 (3514905) | 3514905..3516059 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| G5631_RS17235 (3516354) | 3516354..3517262 | + | 909 | WP_278147104.1 | 2-keto-3-deoxygluconate aldolase | - |
| G5631_RS17240 (3517277) | 3517277..3519244 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| G5631_RS17245 (3519471) | 3519471..3520853 | + | 1383 | WP_000192863.1 | MFS transporter | - |
| G5631_RS17250 (3520865) | 3520865..3522475 | + | 1611 | WP_000406871.1 | glycoside hydrolase family 43 protein | - |
| G5631_RS17255 (3522480) | 3522480..3523238 | - | 759 | WP_001121657.1 | DNA-binding transcriptional repressor XynR | - |
| G5631_RS17260 (3523377) | 3523377..3524381 | - | 1005 | WP_001281825.1 | hypothetical protein | VF |
| G5631_RS17265 (3524351) | 3524351..3524446 | - | 96 | WP_211180486.1 | putative translational regulatory protein ArgL | - |
| G5631_RS17270 (3524505) | 3524505..3524708 | + | 204 | Protein_3373 | DUF3987 domain-containing protein | - |
| G5631_RS17280 (3525576) | 3525576..3526307 | + | 732 | WP_000388269.1 | protein YagJ | - |
| G5631_RS17285 (3526398) | 3526398..3527024 | - | 627 | WP_000860996.1 | inovirus Gp2 family protein | - |
| G5631_RS17290 (3527296) | 3527296..3527994 | - | 699 | WP_001214248.1 | recombinase family protein | - |
| G5631_RS17295 (3528021) | 3528021..3528875 | - | 855 | WP_103119152.1 | protein YagM | - |
| G5631_RS17300 (3528994) | 3528994..3529218 | - | 225 | WP_001272156.1 | helix-turn-helix domain-containing protein | - |
| G5631_RS17305 (3529215) | 3529215..3529655 | - | 441 | WP_000224818.1 | protein YagN | - |
| G5631_RS17310 (3529772) | 3529772..3531172 | - | 1401 | WP_001407714.1 | hypothetical protein ; Integrase | Integrase |
| G5631_RS17315 (3531457) | 3531457..3531795 | - | 339 | Protein_3382 | LysR substrate-binding domain-containing protein | - |
| G5631_RS17320 (3531846) | 3531846..3532802 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| G5631_RS17325 (3532812) | 3532812..3535010 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| G5631_RS17330 (3535007) | 3535007..3535963 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| G5631_RS17335 (3535960) | 3535960..3536649 | - | 690 | WP_000070700.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| G5631_RS17340 (3537067) | 3537067..3537681 | + | 615 | WP_001019920.1 | YagU family protein | - |
| G5631_RS17345 (3537929) | 3537929..3538258 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| G5631_RS17350 (3538571) | 3538571..3539281 | - | 711 | WP_001350485.1 | hypothetical protein | VF |
| G5631_RS17355 (3539250) | 3539250..3540893 | - | 1644 | WP_001310578.1 | hypothetical protein | VF |
| G5631_RS17360 (3540883) | 3540883..3543408 | - | 2526 | WP_001131096.1 | hypothetical protein | VF |
| G5631_RS17365 (3543434) | 3543434..3544102 | - | 669 | WP_000716398.1 | hypothetical protein | VF |
| G5631_RS17370 (3544160) | 3544160..3544747 | - | 588 | WP_000730972.1 | hypothetical protein | VF |
| G5631_RS17375 (3544822) | 3544822..3545364 | - | 543 | WP_001301257.1 | hypothetical protein | VF |
| G5631_RS17380 (3546188) | 3546188..3546415 | + | 228 | WP_001147279.1 | protein YkgL | - |
| G5631_RS17385 (3546450) | 3546450..3546590 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| G5631_RS17390 (3546597) | 3546597..3546854 | - | 258 | Protein_3397 | type B 50S ribosomal protein L31 | - |
| G5631_RS17395 (3547189) | 3547189..3547272 | - | 84 | Protein_3398 | hypothetical protein | - |
| G5631_RS17400 (3547793) | 3547793..3547882 | - | 90 | Protein_3399 | hypothetical protein | - |
| G5631_RS17405 (3548434) | 3548434..3549309 | + | 876 | Protein_3400 | hypothetical protein | VF |
| G5631_RS17410 (3549368) | 3549368..3550530 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| G5631_RS17415 (3550560) | 3550560..3551213 | - | 654 | Protein_3402 | hypothetical protein | VF |
| G5631_RS17420 (3551516) | 3551516..3551644 | + | 129 | Protein_3403 | aldo/keto reductase | - |
| G5631_RS17425 (3551803) | 3551803..3552396 | - | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| G5631_RS17430 (3552408) | 3552408..3552644 | - | 237 | WP_000474084.1 | reactive chlorine resistance periplasmic protein RclB | - |
| G5631_RS17435 (3552753) | 3552753..3554078 | - | 1326 | WP_001046307.1 | reactive chlorine resistance oxidoreductase RclA | - |
| G5631_RS17440 (3554304) | 3554304..3555158 | + | 855 | WP_000339594.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| G5631_RS17445 (3555685) | 3555685..3556404 | + | 720 | WP_001102108.1 | heterodisulfide reductase-related iron-sulfur binding cluster | - |
| G5631_RS17450 (3556415) | 3556415..3557524 | + | 1110 | Protein_3409 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| G5631_RS17460 (3558297) | 3558297..3558620 | - | 324 | Protein_3411 | sigma factor-binding protein Crl | - |
| - (3559338) | 3559338..3559418 | - | 81 | NuclAT_12 | - | - |
| - (3559338) | 3559338..3559418 | - | 81 | NuclAT_12 | - | - |
| - (3559338) | 3559338..3559418 | - | 81 | NuclAT_12 | - | - |
| - (3559338) | 3559338..3559418 | - | 81 | NuclAT_12 | - | - |
| G5631_RS17465 (3558678) | 3558678..3559922 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| G5631_RS17470 (3560014) | 3560014..3560472 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| G5631_RS17475 (3560733) | 3560733..3562190 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| G5631_RS17480 (3562247) | 3562247..3562768 | - | 522 | Protein_3415 | peptide chain release factor H | - |
| G5631_RS17485 (3562764) | 3562764..3562970 | - | 207 | Protein_3416 | RtcB family protein | - |
| G5631_RS17490 (3563288) | 3563288..3563740 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| G5631_RS17495 (3563750) | 3563750..3564148 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| G5631_RS17500 (3564151) | 3564151..3564444 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| G5631_RS17505 (3564496) | 3564496..3565551 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| G5631_RS17510 (3565622) | 3565622..3566407 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| G5631_RS17515 (3566379) | 3566379..3568091 | + | 1713 | Protein_3422 | hypothetical protein | VF |
| G5631_RS17520 (3568315) | 3568315..3568812 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| G5631_RS17525 (3568988) | 3568988..3569737 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| G5631_RS17530 (3569947) | 3569947..3570207 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| G5631_RS17535 (3570210) | 3570210..3570488 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| G5631_RS17540 (3570644) | 3570644..3571384 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| G5631_RS17545 (3571355) | 3571355..3572122 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| G5631_RS17550 (3572328) | 3572328..3572906 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|