MGE detailed information
MGE type: Genomic_island MGE length: 75934 bp
Accession: NZ_CP048812 Location: 1989256..2065189 Organism: Halomonas socia strain CKY01 Replicon: chromosome
Accession: NZ_CP048812 Location: 1989256..2065189 Organism: Halomonas socia strain CKY01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3568_RS09460 () | 1985481..1985813 | - | 333 | WP_076749173.1 | preprotein translocase subunit YajC | - |
| G3568_RS09465 () | 1985867..1986988 | - | 1122 | WP_198034608.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| G3568_RS09470 () | 1987042..1988082 | - | 1041 | WP_163501953.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| G3568_RS09480 () | 1988342..1989364 | - | 1023 | WP_163501954.1 | site-specific integrase | - |
| G3568_RS09485 () | 1989807..1990553 | + | 747 | WP_163501955.1 | hypothetical protein | - |
| G3568_RS09490 () | 1990674..1992176 | - | 1503 | WP_163501956.1 | DUF3987 domain-containing protein | - |
| G3568_RS09495 () | 1992490..1993809 | + | 1320 | WP_163501133.1 | IS1380 family transposase ISPosp7 | Transposase |
| G3568_RS09500 () | 1994082..1994768 | - | 687 | WP_163501957.1 | inovirus-type Gp2 protein | - |
| G3568_RS09505 () | 1995157..1996074 | + | 918 | WP_163501958.1 | Prophage integrase IntA ; Integrase | Integrase |
| G3568_RS09510 () | 1996322..1997668 | - | 1347 | Protein_1860 | IS30 family transposase | - |
| G3568_RS09515 () | 1997641..1997889 | + | 249 | Protein_1861 | IS3 family transposase ISAzs24 | Transposase |
| G3568_RS09520 () | 1998094..1999575 | - | 1482 | WP_163501959.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| G3568_RS09525 () | 1999532..2000776 | - | 1245 | WP_163501960.1 | Long-chain-alcohol dehydrogenase 1 | VF |
| G3568_RS09530 () | 2000779..2001795 | - | 1017 | WP_163501961.1 | Ldh family oxidoreductase | - |
| G3568_RS09535 () | 2001949..2002587 | + | 639 | WP_205600965.1 | FCD domain-containing protein | - |
| G3568_RS09540 () | 2002818..2003054 | - | 237 | WP_163501963.1 | transposase | - |
| G3568_RS09545 () | 2003350..2003808 | - | 459 | WP_163501964.1 | tripartite tricarboxylate transporter TctB family protein | - |
| G3568_RS09550 () | 2003805..2005373 | - | 1569 | WP_163501965.1 | tripartite tricarboxylate transporter permease | - |
| G3568_RS09555 () | 2005493..2006452 | - | 960 | WP_163504226.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| G3568_RS09560 () | 2006612..2007697 | - | 1086 | WP_163501966.1 | isocitrate/isopropylmalate dehydrogenase family protein | - |
| G3568_RS09565 () | 2008177..2008701 | + | 525 | WP_205600966.1 | GntR family transcriptional regulator | - |
| G3568_RS22680 () | 2008644..2008901 | + | 258 | WP_205600967.1 | FCD domain-containing protein | - |
| G3568_RS09570 () | 2009034..2010017 | + | 984 | WP_163501967.1 | putative oxidoreductase YjmC | VF |
| G3568_RS09575 () | 2010033..2010755 | + | 723 | WP_163501968.1 | hypothetical protein | - |
| G3568_RS09580 () | 2010868..2011776 | + | 909 | Protein_1875 | IS30 family transposase ISPsy38 | Transposase |
| G3568_RS09585 () | 2012005..2012910 | - | 906 | WP_163501969.1 | dihydrodipicolinate synthase family protein | - |
| G3568_RS09590 () | 2013020..2014144 | - | 1125 | WP_163501970.1 | mandelate racemase/muconate lactonizing enzyme family protein | - |
| G3568_RS22685 () | 2014246..2014437 | - | 192 | WP_205601063.1 | Ldh family oxidoreductase | - |
| G3568_RS22690 () | 2014374..2014700 | - | 327 | WP_205600968.1 | Ldh family oxidoreductase | - |
| G3568_RS22695 () | 2014676..2015329 | - | 654 | WP_205600969.1 | putative oxidoreductase YjmC | VF |
| G3568_RS09600 () | 2015357..2016268 | - | 912 | WP_205600970.1 | fumarylacetoacetate hydrolase family protein | - |
| G3568_RS09605 () | 2016337..2017863 | - | 1527 | WP_163501971.1 | tripartite tricarboxylate transporter permease | - |
| G3568_RS09610 () | 2017925..2018164 | - | 240 | WP_163501972.1 | tripartite tricarboxylate transporter TctB family protein | - |
| G3568_RS09615 () | 2018429..2019439 | - | 1011 | WP_163501973.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| G3568_RS09620 () | 2019571..2020689 | - | 1119 | WP_163501974.1 | mandelate racemase/muconate lactonizing enzyme family protein | - |
| G3568_RS09625 () | 2021162..2021914 | + | 753 | WP_163501975.1 | GntR family transcriptional regulator | - |
| G3568_RS09630 () | 2022363..2022677 | + | 315 | WP_163501976.1 | hypothetical protein | - |
| G3568_RS09635 () | 2022757..2023725 | + | 969 | WP_163501977.1 | DUF932 domain-containing protein | - |
| G3568_RS09640 () | 2023803..2023988 | + | 186 | WP_163501978.1 | hypothetical protein | - |
| G3568_RS09645 () | 2023999..2024760 | + | 762 | WP_163501979.1 | ERF family protein | - |
| G3568_RS09650 () | 2024819..2025430 | + | 612 | WP_163501345.1 | YqaJ viral recombinase family protein | - |
| G3568_RS09655 () | 2025442..2025939 | + | 498 | WP_163501980.1 | DNA repair protein RadC | - |
| G3568_RS09660 () | 2026206..2026460 | + | 255 | WP_163501981.1 | Arc family DNA-binding protein | Antitoxin Detail |
| G3568_RS09665 () | 2026457..2026882 | + | 426 | WP_163501982.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| G3568_RS09670 () | 2026955..2029701 | + | 2747 | Protein_1895 | class I SAM-dependent DNA methyltransferase | - |
| G3568_RS09675 () | 2029698..2030489 | + | 792 | WP_163501983.1 | hypothetical protein | - |
| G3568_RS09680 () | 2030486..2031496 | + | 1011 | WP_163501984.1 | virulence RhuM family protein | - |
| G3568_RS09685 () | 2031511..2033568 | + | 2058 | WP_163501985.1 | DEAD/DEAH box helicase | - |
| G3568_RS09690 () | 2033561..2034745 | + | 1185 | WP_163501986.1 | GIY-YIG nuclease family protein | - |
| G3568_RS09695 () | 2034878..2035624 | + | 747 | WP_163501987.1 | phage Gp37/Gp68 family protein | - |
| G3568_RS09700 () | 2035654..2036838 | + | 1185 | WP_163501988.1 | three-Cys-motif partner protein TcmP | - |
| G3568_RS09705 () | 2036883..2037078 | + | 196 | Protein_1902 | IS1380 family transposase | - |
| G3568_RS09710 () | 2037551..2039722 | + | 2172 | WP_163501989.1 | TerB N-terminal domain-containing protein | - |
| G3568_RS09715 () | 2039719..2041092 | + | 1374 | WP_163501990.1 | ATP-binding protein | - |
| G3568_RS09720 () | 2041105..2043345 | + | 2241 | WP_163501991.1 | DEAD/DEAH box helicase | - |
| G3568_RS09725 () | 2043408..2043629 | - | 222 | Protein_1906 | IS3 family transposase | - |
| G3568_RS09730 () | 2043747..2044802 | + | 1056 | WP_163501992.1 | LacI family transcriptional regulator | - |
| G3568_RS09735 () | 2044883..2046193 | + | 1311 | WP_205600971.1 | FAD-dependent oxidoreductase | - |
| G3568_RS09740 () | 2046231..2047943 | + | 1713 | WP_163501993.1 | dihydroxy-acid dehydratase | - |
| G3568_RS09745 () | 2047993..2048979 | + | 987 | WP_163501994.1 | TAXI family TRAP transporter solute-binding subunit | - |
| G3568_RS09750 () | 2049071..2050972 | + | 1902 | WP_163501995.1 | TRAP transporter fused permease subunit | - |
| G3568_RS09755 () | 2051122..2051940 | - | 819 | WP_163501996.1 | IS3 family transposase ISKpn40 | Transposase |
| G3568_RS09760 () | 2051937..2052248 | - | 312 | WP_163501997.1 | IS3 family transposase ISKpn40 | Transposase |
| G3568_RS09765 () | 2052449..2052700 | - | 252 | WP_163501998.1 | SOS response-associated peptidase family protein | - |
| G3568_RS09770 () | 2053339..2053560 | - | 222 | WP_163501999.1 | hypothetical protein | - |
| G3568_RS09775 () | 2054093..2054761 | - | 669 | WP_163502000.1 | HAD-IA family hydrolase | - |
| G3568_RS09780 () | 2054803..2055651 | - | 849 | WP_163502001.1 | MurR/RpiR family transcriptional regulator | - |
| G3568_RS09785 () | 2055842..2057797 | + | 1956 | WP_163504229.1 | 5-dehydro-2-deoxygluconokinase | - |
| G3568_RS09790 () | 2057801..2059303 | + | 1503 | WP_163502002.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| G3568_RS09795 () | 2059348..2060037 | + | 690 | WP_163502003.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| G3568_RS09800 () | 2060086..2061120 | + | 1035 | WP_163502004.1 | L-idonate 5-dehydrogenase | - |
| G3568_RS09805 () | 2061146..2061640 | + | 495 | WP_205600972.1 | TRAP transporter small permease subunit | - |
| G3568_RS09810 () | 2061650..2062942 | + | 1293 | WP_163502005.1 | TRAP transporter large permease | - |
| G3568_RS09815 () | 2062963..2063970 | + | 1008 | WP_205600973.1 | TRAP transporter substrate-binding protein DctP | - |
| G3568_RS09825 () | 2064711..2064905 | + | 195 | WP_163502006.1 | stability determinant | Antitoxin Detail |
| G3568_RS09830 () | 2064905..2065189 | + | 285 | WP_163502007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G3568_RS09835 () | 2065386..2065931 | + | 546 | WP_163502008.1 | cytochrome b | - |
| G3568_RS09840 () | 2066037..2066537 | + | 501 | WP_163502009.1 | hypothetical protein | - |
| G3568_RS09845 () | 2066670..2067083 | + | 414 | WP_163502010.1 | nucleoside diphosphate kinase regulator | - |
| G3568_RS09850 () | 2067129..2067737 | + | 609 | WP_163502011.1 | LysE family translocator | - |
| G3568_RS09855 () | 2067741..2068238 | - | 498 | WP_163502012.1 | copper chaperone PCu(A)C | - |
| G3568_RS09860 () | 2068348..2069997 | - | 1650 | WP_163502013.1 | isovaleryl-CoA dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|