MGE detailed information
MGE type: Conjugative plasmid MGE length: 88925 bp
Accession: NZ_CP048612 Location: 1..88925 Organism: Escherichia coli strain STEFF_1 Replicon: plasmid unnamed3
Accession: NZ_CP048612 Location: 1..88925 Organism: Escherichia coli strain STEFF_1 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3M66_RS25265 (46) | 46..1077 | + | 1032 | WP_000907870.1 | plasmid replication initiator RepA | - |
| G3M66_RS25270 (1988) | 1988..2257 | + | 270 | WP_000079942.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| G3M66_RS25275 (2257) | 2257..2535 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| G3M66_RS25280 (2581) | 2581..2793 | + | 213 | Protein_3 | 3'-5' exonuclease | - |
| G3M66_RS25285 (3052) | 3052..3981 | - | 930 | WP_000102288.1 | hypothetical protein | - |
| G3M66_RS25290 (4418) | 4418..5605 | - | 1188 | WP_001697863.1 | IS91 family transposase ISEc37 | Transposase |
| G3M66_RS25295 (5605) | 5605..5970 | - | 366 | WP_000124134.1 | hypothetical protein | - |
| G3M66_RS25300 (6118) | 6118..7410 | - | 1293 | Protein_7 | ISL3 family transposase ISEc38 | Transposase |
| G3M66_RS25305 (7420) | 7420..7896 | - | 477 | Protein_8 | IS256 family transposase IS1414 | Transposase |
| G3M66_RS25310 (7953) | 7953..10634 | - | 2682 | WP_000678689.1 | hypothetical protein | - |
| G3M66_RS25315 (11168) | 11168..11581 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| G3M66_RS25320 (11583) | 11583..12362 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| G3M66_RS25325 (12541) | 12541..13185 | + | 645 | WP_001144036.1 | ParA family protein | - |
| G3M66_RS25330 (13272) | 13272..13580 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| G3M66_RS25335 (13994) | 13994..14974 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| G3M66_RS25340 (14967) | 14967..15383 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| G3M66_RS25345 (15385) | 15385..16659 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| G3M66_RS25350 (16659) | 16659..17096 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| G3M66_RS25355 (17093) | 17093..17341 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| G3M66_RS25360 (17759) | 17759..18661 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| G3M66_RS25365 (18658) | 18658..18969 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| G3M66_RS25370 (19046) | 19046..19729 | + | 684 | WP_000086178.1 | DNA methylase | - |
| G3M66_RS25375 (19730) | 19730..19951 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| G3M66_RS25380 (19911) | 19911..20397 | + | 487 | Protein_23 | DUF1380 family protein | - |
| G3M66_RS25385 (20448) | 20448..21218 | + | 771 | WP_001696732.1 | hypothetical protein | - |
| G3M66_RS25390 (21636) | 21636..22061 | + | 426 | WP_248417885.1 | antirestriction protein | - |
| G3M66_RS25395 (22108) | 22108..22530 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| G3M66_RS25400 (22527) | 22527..22718 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| G3M66_RS25405 (22789) | 22789..23136 | + | 348 | WP_001398159.1 | hypothetical protein | - |
| G3M66_RS25410 (23488) | 23488..24015 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| G3M66_RS25415 (24073) | 24073..24306 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| G3M66_RS25420 (24365) | 24365..26323 | + | 1959 | WP_162754886.1 | ParB/RepB/Spo0J family partition protein | - |
| G3M66_RS25425 (26378) | 26378..26812 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| G3M66_RS25430 (26809) | 26809..27528 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| G3M66_RS25435 (27525) | 27525..28121 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| G3M66_RS25440 (28584) | 28584..29084 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| G3M66_RS25445 (29813) | 29813..30247 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| G3M66_RS25450 (30339) | 30339..30605 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| G3M66_RS25455 (30670) | 30670..31611 | + | 942 | WP_039023393.1 | Recombination-promoting nuclease RpnA | VF |
| G3M66_RS25460 (31673) | 31673..31843 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| G3M66_RS25465 (31874) | 31874..32125 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| G3M66_RS25470 (32705) | 32705..33553 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| G3M66_RS25475 (33638) | 33638..33973 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| G3M66_RS25480 (34207) | 34207..34539 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| G3M66_RS25485 (34550) | 34550..37249 | + | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| G3M66_RS25490 (37286) | 37286..39577 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| G3M66_RS25495 (39570) | 39570..40640 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| G3M66_RS25500 (40659) | 40659..41867 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (42047) | 42047..42109 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (42047) | 42047..42109 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (42047) | 42047..42109 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (42047) | 42047..42109 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| G3M66_RS25505 (42159) | 42159..42311 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| G3M66_RS25510 (42383) | 42383..42634 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| G3M66_RS25850 (43133) | 43133..43228 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| G3M66_RS25520 (43293) | 43293..43469 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| G3M66_RS25525 (43861) | 43861..44070 | + | 210 | WP_039025903.1 | HEAT repeat domain-containing protein | - |
| G3M66_RS25530 (44142) | 44142..44804 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| G3M66_RS25535 (44875) | 44875..47043 | - | 2169 | WP_000698354.1 | DotA/TraY family protein | - |
| G3M66_RS25540 (47140) | 47140..47724 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| G3M66_RS25545 (47753) | 47753..48955 | - | 1203 | WP_001385654.1 | IncI1-type conjugal transfer protein TraW | - |
| G3M66_RS25550 (48922) | 48922..49536 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| G3M66_RS25555 (49536) | 49536..52580 | - | 3045 | WP_248417882.1 | IncI1-type conjugal transfer protein TraU | - |
| G3M66_RS25560 (52670) | 52670..53470 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| G3M66_RS25565 (53454) | 53454..53642 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| G3M66_RS25570 (53706) | 53706..54110 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| G3M66_RS25575 (54161) | 54161..54688 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| G3M66_RS25580 (54688) | 54688..55392 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| G3M66_RS25585 (55392) | 55392..56681 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| G3M66_RS25590 (56684) | 56684..57667 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| G3M66_RS25595 (57678) | 57678..58370 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| G3M66_RS25600 (58367) | 58367..58714 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| G3M66_RS25605 (58732) | 58732..62499 | - | 3768 | WP_031942279.1 | DUF5710 domain-containing protein | - |
| G3M66_RS25610 (62589) | 62589..63140 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| G3M66_RS25615 (63155) | 63155..63445 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| G3M66_RS25620 (63442) | 63442..64590 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| G3M66_RS25625 (64587) | 64587..65405 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| G3M66_RS25630 (65402) | 65402..65860 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| G3M66_RS25635 (66255) | 66255..66839 | - | 585 | WP_031942280.1 | histidine phosphatase family protein | - |
| G3M66_RS25640 (66899) | 66899..68101 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| G3M66_RS25645 (68232) | 68232..69200 | - | 969 | WP_000654812.1 | IS5 family transposase IS903B | Transposase |
| G3M66_RS25650 (69252) | 69252..70076 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| G3M66_RS25655 (70227) | 70227..71381 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| G3M66_RS25660 (71380) | 71380..71733 | + | 354 | WP_248417883.1 | shufflon protein D' | - |
| G3M66_RS25665 (72401) | 72401..72649 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| G3M66_RS25670 (72646) | 72646..73938 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| G3M66_RS25675 (73938) | 73938..74594 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| G3M66_RS25680 (74579) | 74579..75139 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| G3M66_RS25685 (75149) | 75149..75763 | - | 615 | WP_000959786.1 | hypothetical protein | VF |
| G3M66_RS25690 (75781) | 75781..76878 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| G3M66_RS25695 (76891) | 76891..78444 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| G3M66_RS25700 (78455) | 78455..78907 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| G3M66_RS25705 (78894) | 78894..80189 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| G3M66_RS25710 (80182) | 80182..81864 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| G3M66_RS25715 (81878) | 81878..82315 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| G3M66_RS25720 (82315) | 82315..83382 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| G3M66_RS25725 (84006) | 84006..84302 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| G3M66_RS25730 (84478) | 84478..84732 | - | 255 | WP_248417884.1 | PilI type IV pilus biogenesis protein | - |
| G3M66_RS25735 (84894) | 84894..85445 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| G3M66_RS25740 (85618) | 85618..86301 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| G3M66_RS25745 (86555) | 86555..87088 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| G3M66_RS25750 (87530) | 87530..87817 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| G3M66_RS25755 (87735) | 87735..87965 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|