MGE detailed information
MGE type: Genomic_island MGE length: 35205 bp
Accession: NZ_CP048337 Location: 4476376..4511580 Organism: Escherichia coli strain 142 Replicon: chromosome
Accession: NZ_CP048337 Location: 4476376..4511580 Organism: Escherichia coli strain 142 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS12_RS21390 () | 4471398..4471781 | - | 384 | WP_000271012.1 | hypothetical protein | - |
| GZS12_RS21395 () | 4471949..4472518 | - | 570 | WP_000221478.1 | inovirus Gp2 family protein | - |
| GZS12_RS21400 () | 4473148..4473360 | - | 213 | WP_087901481.1 | hemolysin expression modulator Hha | - |
| GZS12_RS21405 () | 4474274..4474480 | + | 207 | WP_193224947.1 | AlpA family transcriptional regulator | - |
| GZS12_RS21410 () | 4474574..4475176 | + | 603 | WP_149282298.1 | hypothetical protein | - |
| GZS12_RS21415 () | 4476376..4477293 | + | 918 | WP_135113592.1 | hypothetical protein | - |
| GZS12_RS21420 () | 4477377..4477697 | + | 321 | Protein_4188 | 50S ribosome-binding GTPase | - |
| GZS12_RS21425 () | 4477893..4477979 | - | 87 | WP_089627921.1 | transposase | - |
| GZS12_RS21430 () | 4478290..4479498 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| GZS12_RS21435 () | 4480099..4480986 | - | 888 | WP_089627917.1 | HTH-type transcriptional regulator ArgP | - |
| GZS12_RS21440 () | 4481033..4482529 | - | 1497 | WP_162646439.1 | lysine--tRNA ligase | - |
| GZS12_RS21445 () | 4482823..4483533 | - | 711 | WP_089627913.1 | helix-turn-helix domain-containing protein | - |
| GZS12_RS21450 () | 4483740..4485866 | - | 2127 | WP_089627911.1 | lysine decarboxylase LdcC | - |
| GZS12_RS21455 () | 4485897..4487207 | - | 1311 | WP_089627910.1 | cadaverine/lysine antiporter | - |
| GZS12_RS21460 () | 4487561..4487955 | + | 395 | Protein_4196 | transposase | - |
| GZS12_RS21470 () | 4488255..4488437 | - | 183 | WP_089627908.1 | hypothetical protein | - |
| GZS12_RS21475 () | 4488768..4489640 | + | 873 | WP_139534717.1 | GTPase family protein | - |
| GZS12_RS21480 () | 4489858..4492242 | + | 2385 | WP_087901479.1 | dynamin family protein | - |
| GZS12_RS21485 () | 4492239..4493144 | + | 906 | WP_135113596.1 | chemotaxis protein | - |
| GZS12_RS21490 () | 4493141..4494211 | + | 1071 | WP_087901478.1 | hypothetical protein | VF |
| GZS12_RS21495 () | 4494426..4495123 | + | 698 | Protein_4202 | IS1 family transposase IS1S | Transposase |
| GZS12_RS21500 () | 4495120..4495569 | + | 450 | WP_080700391.1 | hypothetical protein | - |
| GZS12_RS21505 () | 4495689..4495862 | + | 174 | WP_000088744.1 | DUF905 family protein | - |
| GZS12_RS21510 () | 4495962..4496780 | + | 819 | WP_023909039.1 | DUF945 domain-containing protein | - |
| GZS12_RS21515 () | 4496835..4497320 | + | 486 | WP_000849596.1 | antirestriction protein | - |
| GZS12_RS21520 () | 4497336..4497812 | + | 477 | WP_001186771.1 | RadC family protein | - |
| GZS12_RS21525 () | 4497899..4498120 | + | 222 | WP_000692349.1 | DUF987 domain-containing protein | - |
| GZS12_RS21530 () | 4498200..4498568 | + | 369 | WP_001539669.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GZS12_RS21535 () | 4498658..4499035 | + | 378 | WP_000854720.1 | TA system toxin CbtA family protein | Toxin Detail |
| GZS12_RS21540 () | 4499032..4499520 | + | 489 | WP_000777672.1 | hypothetical protein | - |
| GZS12_RS21545 () | 4499532..4499729 | + | 198 | WP_000839238.1 | DUF957 domain-containing protein | - |
| GZS12_RS21550 () | 4499822..4500688 | + | 867 | WP_001290180.1 | DUF4942 domain-containing protein | - |
| GZS12_RS21555 () | 4500760..4501023 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| GZS12_RS21560 () | 4501020..4501346 | + | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GZS12_RS21565 () | 4502229..4503767 | + | 1539 | WP_023908864.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| GZS12_RS21570 () | 4504133..4505467 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| GZS12_RS21575 () | 4505547..4507694 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| GZS12_RS21580 () | 4507753..4509210 | + | 1458 | WP_022646457.1 | dipeptide/tripeptide permease DtpC | - |
| GZS12_RS21585 () | 4509447..4510964 | + | 1518 | WP_022646456.1 | lysine--tRNA ligase | - |
| GZS12_RS21590 () | 4511083..4511256 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| GZS12_RS21595 () | 4511284..4511580 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| GZS12_RS21600 () | 4511809..4512081 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| GZS12_RS21605 () | 4512093..4512323 | - | 231 | WP_001683478.1 | (4Fe-4S)-binding protein | - |
| GZS12_RS21610 () | 4512504..4514135 | + | 1632 | WP_022646455.1 | sensor histidine kinase | - |
| GZS12_RS21615 () | 4514132..4514851 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|