MGE detailed information
MGE type: Prophage MGE length: 54325 bp
Accession: NZ_CP048008 Location: 127..54451 Organism: Staphylococcus lugdunensis strain CGMH-SL118 Replicon: chromosome
Accession: NZ_CP048008 Location: 127..54451 Organism: Staphylococcus lugdunensis strain CGMH-SL118 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GWC79_RS00005 | 127..501 | - | 375 | WP_228865351.1 | transcriptional regulator | - |
| GWC79_RS00010 | 514..657 | - | 144 | WP_201259059.1 | hypothetical protein | - |
| GWC79_RS00015 | 654..836 | - | 183 | WP_085317566.1 | regulator | - |
| GWC79_RS00020 | 829..978 | - | 150 | WP_150891443.1 | DUF1381 domain-containing protein | - |
| GWC79_RS00025 | 1015..1530 | - | 516 | WP_070866283.1 | dUTP pyrophosphatase | - |
| GWC79_RS00030 | 1549..1800 | - | 252 | WP_070817171.1 | hypothetical protein | - |
| GWC79_RS00035 | 1808..2041 | - | 234 | WP_070817172.1 | DUF1024 family protein | - |
| GWC79_RS00040 | 2045..2467 | - | 423 | WP_228865352.1 | DUF3310 domain-containing protein | - |
| GWC79_RS00045 | 2473..2724 | - | 252 | WP_228865353.1 | hypothetical protein | VF |
| GWC79_RS00050 | 2727..3041 | - | 315 | WP_002478874.1 | hypothetical protein | - |
| GWC79_RS00055 | 3038..3445 | - | 408 | WP_002478873.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GWC79_RS00060 | 3454..3696 | - | 243 | WP_228865355.1 | hypothetical protein | - |
| GWC79_RS00065 | 3686..3850 | - | 165 | WP_176747064.1 | hypothetical protein | - |
| GWC79_RS00070 | 3847..4632 | - | 786 | WP_228865357.1 | ATP-binding protein | - |
| GWC79_RS00075 | 4645..5403 | - | 759 | WP_150891548.1 | replication protein | - |
| GWC79_RS00080 | 5400..5615 | - | 216 | WP_070817176.1 | hypothetical protein | - |
| GWC79_RS00085 | 5627..5878 | - | 252 | WP_070817177.1 | helix-turn-helix transcriptional regulator | - |
| GWC79_RS00090 | 5891..6319 | - | 429 | WP_228865359.1 | single-stranded DNA-binding protein | - |
| GWC79_RS00095 | 6316..6990 | - | 675 | WP_228865365.1 | ERF family protein | - |
| GWC79_RS00100 | 6991..7476 | - | 486 | WP_228865549.1 | siphovirus Gp157 family protein | - |
| GWC79_RS00105 | 7949..8332 | + | 384 | WP_002478859.1 | hypothetical protein | - |
| GWC79_RS00110 | 8280..8591 | - | 312 | WP_070866275.1 | hypothetical protein | - |
| GWC79_RS00115 | 8631..9125 | - | 495 | WP_228865367.1 | ORF6C domain-containing protein | - |
| GWC79_RS00120 | 9185..9415 | + | 231 | WP_051522842.1 | hypothetical protein | - |
| GWC79_RS00125 | 9412..9558 | - | 147 | WP_183998736.1 | hypothetical protein | - |
| GWC79_RS00130 | 9571..10452 | - | 882 | WP_228865369.1 | DUF3102 domain-containing protein | - |
| GWC79_RS00135 | 10513..11115 | + | 603 | WP_228865370.1 | hypothetical protein | - |
| GWC79_RS00140 | 11125..11268 | - | 144 | WP_002478861.1 | hypothetical protein | - |
| GWC79_RS00145 | 11284..11523 | - | 240 | WP_228865371.1 | helix-turn-helix transcriptional regulator | - |
| GWC79_RS00150 | 11715..12044 | + | 330 | WP_228865372.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| GWC79_RS00155 | 12056..12520 | + | 465 | WP_228865373.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| GWC79_RS00160 | 12547..12729 | + | 183 | WP_012991013.1 | hypothetical protein | - |
| GWC79_RS00165 | 12733..13701 | + | 969 | WP_062078527.1 | DUF3644 domain-containing protein | - |
| GWC79_RS00170 | 13883..15265 | + | 1383 | WP_228865374.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| GWC79_RS00175 | 15362..15988 | - | 627 | WP_228865324.1 | hypothetical protein | - |
| GWC79_RS00180 | 15985..16260 | - | 276 | WP_014533277.1 | hypothetical protein | - |
| GWC79_RS00185 | 16454..17920 | - | 1467 | WP_228865325.1 | SH3 domain-containing protein | - |
| GWC79_RS00190 | 17923..18372 | - | 450 | WP_228865327.1 | phage holin | - |
| GWC79_RS00195 | 18429..20993 | - | 2565 | WP_228865329.1 | SGNH/GDSL hydrolase family protein | - |
| GWC79_RS00200 | 21141..21437 | - | 297 | WP_012990964.1 | DUF2951 family protein | - |
| GWC79_RS00205 | 21471..21617 | - | 147 | WP_176746552.1 | hypothetical protein | - |
| GWC79_RS00210 | 21614..23797 | - | 2184 | WP_228865331.1 | phage tail protein | - |
| GWC79_RS00215 | 23816..24913 | - | 1098 | WP_228865333.1 | hypothetical protein | - |
| GWC79_RS00220 | 24930..25883 | - | 954 | WP_228865340.1 | phage tail family protein | - |
| GWC79_RS00225 | 25904..29560 | - | 3657 | WP_228865343.1 | hypothetical protein | - |
| GWC79_RS00230 | 29567..29932 | - | 366 | WP_228865350.1 | hypothetical protein | - |
| GWC79_RS00235 | 29977..30342 | - | 366 | WP_012990971.1 | tail assembly chaperone | - |
| GWC79_RS00240 | 30417..30980 | - | 564 | WP_070817161.1 | phage major tail protein, TP901-1 family | - |
| GWC79_RS00245 | 30998..31384 | - | 387 | WP_012990973.1 | hypothetical protein | - |
| GWC79_RS00250 | 31395..31505 | - | 111 | Protein_49 | hypothetical protein | - |
| GWC79_RS00255 | 31755..32018 | - | 264 | WP_228865377.1 | hypothetical protein | - |
| GWC79_RS00260 | 32018..32320 | - | 303 | WP_228865379.1 | hypothetical protein | - |
| GWC79_RS00265 | 32317..32646 | - | 330 | WP_070481521.1 | phage head-tail connector protein | - |
| GWC79_RS00270 | 32656..32895 | - | 240 | WP_228865381.1 | hypothetical protein | - |
| GWC79_RS00275 | 32910..33815 | - | 906 | WP_070557759.1 | capsid protein | - |
| GWC79_RS00280 | 33835..34440 | - | 606 | WP_228865384.1 | DUF4355 domain-containing protein | - |
| GWC79_RS13685 | 34569..34703 | - | 135 | WP_256277651.1 | hypothetical protein | - |
| GWC79_RS00285 | 34785..35750 | - | 966 | WP_228865386.1 | minor capsid protein | - |
| GWC79_RS00290 | 35737..37188 | - | 1452 | WP_228865388.1 | phage portal protein | - |
| GWC79_RS00295 | 37200..38474 | - | 1275 | WP_228865392.1 | PBSX family phage terminase large subunit | - |
| GWC79_RS00300 | 38461..38958 | - | 498 | WP_002478885.1 | terminase small subunit | - |
| GWC79_RS00305 | 39265..39687 | - | 423 | WP_002478884.1 | RinA family phage transcriptional regulator | - |
| GWC79_RS00310 | 39700..39843 | - | 144 | WP_201259059.1 | hypothetical protein | - |
| GWC79_RS00315 | 39840..40022 | - | 183 | WP_085317566.1 | regulator | - |
| GWC79_RS00320 | 40015..40164 | - | 150 | WP_150891443.1 | DUF1381 domain-containing protein | - |
| GWC79_RS00325 | 40201..40716 | - | 516 | WP_070866283.1 | dUTP pyrophosphatase | - |
| GWC79_RS00330 | 40735..40986 | - | 252 | WP_070817171.1 | hypothetical protein | - |
| GWC79_RS00335 | 40994..41227 | - | 234 | WP_070817172.1 | DUF1024 family protein | - |
| GWC79_RS00340 | 41231..41653 | - | 423 | WP_228865352.1 | DUF3310 domain-containing protein | - |
| GWC79_RS00345 | 41659..41910 | - | 252 | WP_228865353.1 | hypothetical protein | VF |
| GWC79_RS00350 | 41913..42227 | - | 315 | WP_002478874.1 | hypothetical protein | - |
| GWC79_RS00355 | 42224..42631 | - | 408 | WP_002478873.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GWC79_RS00360 | 42640..42882 | - | 243 | WP_228865355.1 | hypothetical protein | - |
| GWC79_RS00365 | 42872..43036 | - | 165 | WP_176747064.1 | hypothetical protein | - |
| GWC79_RS00370 | 43033..43818 | - | 786 | WP_228865357.1 | ATP-binding protein | - |
| GWC79_RS00375 | 43831..44589 | - | 759 | WP_150891548.1 | replication protein | - |
| GWC79_RS00380 | 44586..44801 | - | 216 | WP_070817176.1 | hypothetical protein | - |
| GWC79_RS00385 | 44813..45064 | - | 252 | WP_070817177.1 | helix-turn-helix transcriptional regulator | - |
| GWC79_RS00390 | 45077..45505 | - | 429 | WP_228865359.1 | single-stranded DNA-binding protein | - |
| GWC79_RS00395 | 45502..46176 | - | 675 | WP_228865365.1 | ERF family protein | - |
| GWC79_RS00400 | 46177..46662 | - | 486 | WP_228865549.1 | siphovirus Gp157 family protein | - |
| GWC79_RS00405 | 47135..47518 | + | 384 | WP_002478859.1 | hypothetical protein | - |
| GWC79_RS00410 | 47466..47777 | - | 312 | WP_070866275.1 | hypothetical protein | - |
| GWC79_RS00415 | 47817..48311 | - | 495 | WP_228865367.1 | ORF6C domain-containing protein | - |
| GWC79_RS00420 | 48371..48601 | + | 231 | WP_051522842.1 | hypothetical protein | - |
| GWC79_RS00425 | 48598..48744 | - | 147 | WP_183998736.1 | hypothetical protein | - |
| GWC79_RS00430 | 48757..49638 | - | 882 | WP_228865369.1 | DUF3102 domain-containing protein | - |
| GWC79_RS00435 | 49699..50301 | + | 603 | WP_228865370.1 | hypothetical protein | - |
| GWC79_RS00440 | 50311..50454 | - | 144 | WP_002478861.1 | hypothetical protein | - |
| GWC79_RS00445 | 50470..50709 | - | 240 | WP_228865371.1 | helix-turn-helix transcriptional regulator | - |
| GWC79_RS00450 | 50901..51230 | + | 330 | WP_228865372.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| GWC79_RS00455 | 51242..51706 | + | 465 | WP_228865373.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| GWC79_RS00460 | 51733..51915 | + | 183 | WP_012991013.1 | hypothetical protein | - |
| GWC79_RS00465 | 51919..52887 | + | 969 | WP_062078527.1 | DUF3644 domain-containing protein | - |
| GWC79_RS00470 | 53069..54451 | + | 1383 | WP_228865374.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| GWC79_RS00475 | 54481..55671 | + | 1191 | Protein_95 | FAD-dependent oxidoreductase | - |
| GWC79_RS00480 | 56005..56346 | - | 342 | WP_002479428.1 | DUF1450 domain-containing protein | - |
| GWC79_RS00485 | 56512..57588 | - | 1077 | WP_002459879.1 | phosphomevalonate kinase | - |
| GWC79_RS00490 | 57601..58584 | - | 984 | WP_002459880.1 | diphosphomevalonate decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|